RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 POMGNT1Q8WZA1 660 aa12.45□□□□□ -0.42
SMAD4-205ENST00000588745 KAT2BQ92831 832 aa12.45□□□□□ -0.42
SMAD4-205ENST00000588745 ZBTB10Q96DT7 871 aa12.45□□□□□ -0.42
SMAD4-205ENST00000588745 BAG1Q99933 345 aaPredicted RBP12.45□□□□□ -0.42
SMAD4-205ENST00000588745 MMRN2Q9H8L6 949 aa12.45□□□□□ -0.42
SMAD4-205ENST00000588745 RRAGDQ9NQL2 400 aaPredicted RBP12.45□□□□□ -0.42
SMAD4-205ENST00000588745 SRRDQ9UH36 339 aa12.45□□□□□ -0.42
SMAD4-205ENST00000588745 STYXL1Q9Y6J8 313 aa12.45□□□□□ -0.42
SMAD4-205ENST00000588745 GTPBP10A4D1E9 387 aaKnown RBP12.44□□□□□ -0.42
SMAD4-205ENST00000588745 RRN3P2A6NIE6 340 aa12.44□□□□□ -0.42
SMAD4-205ENST00000588745 HAS3O00219 553 aa12.44□□□□□ -0.42
SMAD4-205ENST00000588745 KIAA0391O15091 583 aaKnown RBP12.44□□□□□ -0.42
SMAD4-205ENST00000588745 ARHGAP6O43182 974 aa12.44□□□□□ -0.42
SMAD4-205ENST00000588745 SEPT4O43236 478 aa12.44□□□□□ -0.42
SMAD4-205ENST00000588745 PRKCBP05771 671 aa12.44□□□□□ -0.42
SMAD4-205ENST00000588745 ADRB2P07550 413 aa12.44□□□□□ -0.42
SMAD4-205ENST00000588745 MYL3P08590 195 aa12.44□□□□□ -0.42
SMAD4-205ENST00000588745 SMIM10L2AP0DMW4 78 aa12.44□□□□□ -0.42
SMAD4-205ENST00000588745 SMIM10L2BP0DMW5 78 aa12.44□□□□□ -0.42
SMAD4-205ENST00000588745 HOXD10P28358 340 aa12.44□□□□□ -0.42
SMAD4-205ENST00000588745 PSEN2P49810 448 aa12.44□□□□□ -0.42
SMAD4-205ENST00000588745 GJA9P57773 515 aa12.44□□□□□ -0.42
SMAD4-205ENST00000588745 IRX5P78411 483 aaPredicted RBP12.44□□□□□ -0.42
SMAD4-205ENST00000588745 HTRA3P83110 453 aa12.44□□□□□ -0.42
SMAD4-205ENST00000588745 ZBED6P86452 979 aa12.44□□□□□ -0.42
SMAD4-205ENST00000588745 BEX3Q00994 111 aa12.44□□□□□ -0.42
SMAD4-205ENST00000588745 MFSD10Q14728 455 aa12.44□□□□□ -0.42
SMAD4-205ENST00000588745 SNRNP35Q16560 246 aaKnown RBP12.44□□□□□ -0.42
SMAD4-205ENST00000588745 FSCN1Q16658 493 aaKnown RBP12.44□□□□□ -0.42
SMAD4-205ENST00000588745 KIAA0753Q2KHM9 967 aa12.44□□□□□ -0.42
SMAD4-205ENST00000588745 ZPBP2Q6X784 338 aa12.44□□□□□ -0.42
SMAD4-205ENST00000588745 GPD1LQ8N335 351 aa12.44□□□□□ -0.42
SMAD4-205ENST00000588745 C17orf53Q8N3J3 647 aaPredicted RBP12.44□□□□□ -0.42
SMAD4-205ENST00000588745 ZSWIM2Q8NEG5 633 aa12.44□□□□□ -0.42
SMAD4-205ENST00000588745 LMBR1Q8WVP7 490 aa12.44□□□□□ -0.42
SMAD4-205ENST00000588745 SAAL1Q96ER3 474 aa12.44□□□□□ -0.42
SMAD4-205ENST00000588745 FBXL18Q96ME1 805 aa12.44□□□□□ -0.42
SMAD4-205ENST00000588745 NLRP4Q96MN2 994 aa12.44□□□□□ -0.42
SMAD4-205ENST00000588745 DNAJC7Q99615 494 aa12.44□□□□□ -0.42
SMAD4-205ENST00000588745 KATNAL1Q9BW62 490 aa12.44□□□□□ -0.42
SMAD4-205ENST00000588745 LSM14BQ9BX40 385 aaKnown RBP12.44□□□□□ -0.42
SMAD4-205ENST00000588745 NAA15Q9BXJ9 866 aaKnown RBP12.44□□□□□ -0.42
SMAD4-205ENST00000588745 NFKBIZQ9BYH8 718 aa12.44□□□□□ -0.42
SMAD4-205ENST00000588745 EDEM3Q9BZQ6 932 aa12.44□□□□□ -0.42
SMAD4-205ENST00000588745 UPF3AQ9H1J1 476 aaKnown RBP12.44□□□□□ -0.42
SMAD4-205ENST00000588745 FAM207AQ9NSI2 230 aaPredicted RBP12.44□□□□□ -0.42
SMAD4-205ENST00000588745 LUC7L2Q9Y383 392 aaKnown RBP12.44□□□□□ -0.42
SMAD4-205ENST00000588745 EVPLQ92817 2033 aa12.44□□□□□ -0.42
SMAD4-205ENST00000588745 NRCAMQ92823 1304 aa12.44□□□□□ -0.42
SMAD4-205ENST00000588745 GOLGA8IPA6NC78 632 aa12.43□□□□□ -0.42
SMAD4-205ENST00000588745 GOLGA8JA6NMD2 632 aa12.43□□□□□ -0.42
SMAD4-205ENST00000588745 GPR25O00155 361 aa12.43□□□□□ -0.42
SMAD4-205ENST00000588745 EPHB6O15197 1021 aa12.43□□□□□ -0.42
SMAD4-205ENST00000588745 MSCO60682 206 aa12.43□□□□□ -0.42
SMAD4-205ENST00000588745 GJB1P08034 283 aa12.43□□□□□ -0.42
SMAD4-205ENST00000588745 TRIM49P0CI25 452 aa12.43□□□□□ -0.42
SMAD4-205ENST00000588745 TRIM49CP0CI26 452 aa12.43□□□□□ -0.42
SMAD4-205ENST00000588745 SRGAP2CP0DJJ0 459 aa12.43□□□□□ -0.42
SMAD4-205ENST00000588745 TMOD1P28289 359 aa12.43□□□□□ -0.42
SMAD4-205ENST00000588745 PHKA2P46019 1235 aa12.43□□□□□ -0.42
SMAD4-205ENST00000588745 FMO5P49326 533 aa12.43□□□□□ -0.42
SMAD4-205ENST00000588745 VAMP7P51809 220 aa12.43□□□□□ -0.42
SMAD4-205ENST00000588745 MCCD1P59942 119 aaPredicted RBP12.43□□□□□ -0.42
SMAD4-205ENST00000588745 POU5F1BQ06416 359 aa12.43□□□□□ -0.42
SMAD4-205ENST00000588745 CACNB2Q08289 660 aaPredicted RBP12.43□□□□□ -0.42
SMAD4-205ENST00000588745 TRIM32Q13049 653 aa12.43□□□□□ -0.42
SMAD4-205ENST00000588745 MAPK6Q16659 721 aa12.43□□□□□ -0.42
SMAD4-205ENST00000588745 MARCH8Q5T0T0 291 aa12.43□□□□□ -0.42
SMAD4-205ENST00000588745 IFNLR1Q8IU57 520 aaPredicted RBP12.43□□□□□ -0.42
SMAD4-205ENST00000588745 CBWD2Q8IUF1 395 aa12.43□□□□□ -0.42
SMAD4-205ENST00000588745 RDH13Q8NBN7 331 aa12.43□□□□□ -0.42
SMAD4-205ENST00000588745 MAP7D2Q96T17 732 aa12.43□□□□□ -0.42
SMAD4-205ENST00000588745 CRACR2AQ9BSW2 395 aa12.43□□□□□ -0.42
SMAD4-205ENST00000588745 TARS2Q9BW92 718 aaKnown RBP12.43□□□□□ -0.42
SMAD4-205ENST00000588745 MRPL4Q9BYD3 311 aaKnown RBP12.43□□□□□ -0.42
SMAD4-205ENST00000588745 SETD4Q9NVD3 440 aa12.43□□□□□ -0.42
SMAD4-205ENST00000588745 SAGE1Q9NXZ1 904 aa12.43□□□□□ -0.42
SMAD4-205ENST00000588745 CEP72Q9P209 647 aa12.43□□□□□ -0.42
SMAD4-205ENST00000588745 AKT3Q9Y243 479 aa12.43□□□□□ -0.42
SMAD4-205ENST00000588745 KAT6AQ92794 2004 aa12.43□□□□□ -0.42
SMAD4-205ENST00000588745 MYADML2A6NDP7 307 aa12.43□□□□□ -0.42
SMAD4-205ENST00000588745 EXTL3O43909 919 aa12.43□□□□□ -0.42
SMAD4-205ENST00000588745 KPNA6O60684 536 aa12.43□□□□□ -0.42
SMAD4-205ENST00000588745 N4BP1O75113 896 aaKnown RBP12.43□□□□□ -0.42
SMAD4-205ENST00000588745 GNRH1P01148 92 aa12.43□□□□□ -0.42
SMAD4-205ENST00000588745 HMGCRP04035 888 aa12.43□□□□□ -0.42
SMAD4-205ENST00000588745 C6orf222P0C671 652 aaPredicted RBP12.43□□□□□ -0.42
SMAD4-205ENST00000588745 RARBP10826 455 aa12.43□□□□□ -0.42
SMAD4-205ENST00000588745 PRKAR2AP13861 404 aaKnown RBP12.43□□□□□ -0.42
SMAD4-205ENST00000588745 ELNP15502 786 aa12.43□□□□□ -0.42
SMAD4-205ENST00000588745 PTENP60484 403 aa12.43□□□□□ -0.42
SMAD4-205ENST00000588745 NKX3-2P78367 333 aa12.43□□□□□ -0.42
SMAD4-205ENST00000588745 PURAQ00577 322 aaKnown RBP12.43□□□□□ -0.42
SMAD4-205ENST00000588745 MYL7Q01449 175 aa12.43□□□□□ -0.42
SMAD4-205ENST00000588745 MBTD1Q05BQ5 628 aa12.43□□□□□ -0.42
SMAD4-205ENST00000588745 ENPEPQ07075 957 aa12.43□□□□□ -0.42
SMAD4-205ENST00000588745 HSP90AA2PQ14568 343 aaPredicted RBP12.43□□□□□ -0.42
SMAD4-205ENST00000588745 NOLC1Q14978 699 aaKnown RBP eCLIP12.43□□□□□ -0.42
SMAD4-205ENST00000588745 EXOC3L4Q17RC7 722 aa12.43□□□□□ -0.42
SMAD4-205ENST00000588745 SLFN12LQ6IEE8 588 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms