RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, human

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HERPUD1-208	ENST00000563911	ADGRF1	Q5T601	910 aa		7.51	□□□□□ -1.21
HERPUD1-208	ENST00000563911	SUSD4	Q5VX71	490 aa		7.51	□□□□□ -1.21
HERPUD1-208	ENST00000563911	HHIPL2	Q6UWX4	724 aa		7.51	□□□□□ -1.21
HERPUD1-208	ENST00000563911	TTLL7	Q6ZT98	887 aa		7.51	□□□□□ -1.21
HERPUD1-208	ENST00000563911	MILR1	Q7Z6M3	343 aa		7.51	□□□□□ -1.21
HERPUD1-208	ENST00000563911	SH3RF2	Q8TEC5	729 aa		7.51	□□□□□ -1.21
HERPUD1-208	ENST00000563911	JDP2	Q8WYK2	163 aa		7.51	□□□□□ -1.21
HERPUD1-208	ENST00000563911	PEX11G	Q96HA9	241 aa		7.51	□□□□□ -1.21
HERPUD1-208	ENST00000563911	ZFP64	Q9NPA5	681 aa		7.51	□□□□□ -1.21
HERPUD1-208	ENST00000563911	SPTLC3	Q9NUV7	552 aa		7.51	□□□□□ -1.21
HERPUD1-208	ENST00000563911	TYW1	Q9NV66	732 aa	Known RBP	7.51	□□□□□ -1.21
HERPUD1-208	ENST00000563911	OXSM	Q9NWU1	459 aa		7.51	□□□□□ -1.21
HERPUD1-208	ENST00000563911	SLC5A4	Q9NY91	659 aa		7.51	□□□□□ -1.21
HERPUD1-208	ENST00000563911	MIS18A	Q9NYP9	233 aa		7.51	□□□□□ -1.21
HERPUD1-208	ENST00000563911	PALD1	Q9ULE6	856 aa		7.51	□□□□□ -1.21
HERPUD1-208	ENST00000563911	SRPK3	Q9UPE1	567 aa		7.51	□□□□□ -1.21
HERPUD1-208	ENST00000563911	APOBEC2	Q9Y235	224 aa	Known RBP	7.51	□□□□□ -1.21
HERPUD1-208	ENST00000563911	NPC1L1	Q9UHC9	1359 aa		7.5	□□□□□ -1.21
HERPUD1-208	ENST00000563911	SCD	O00767	359 aa		7.5	□□□□□ -1.21
HERPUD1-208	ENST00000563911	SGSM2	O43147	1006 aa		7.5	□□□□□ -1.21
HERPUD1-208	ENST00000563911	SRGAP3	O43295	1099 aa		7.5	□□□□□ -1.21
HERPUD1-208	ENST00000563911	HIP1R	O75146	1068 aa		7.5	□□□□□ -1.21
HERPUD1-208	ENST00000563911	TADA3	O75528	432 aa		7.5	□□□□□ -1.21
HERPUD1-208	ENST00000563911	LSS	P48449	732 aa		7.5	□□□□□ -1.21
HERPUD1-208	ENST00000563911	ERVFRD-1	P60508	538 aa		7.5	□□□□□ -1.21
HERPUD1-208	ENST00000563911	RAB3GAP1	Q15042	981 aa		7.5	□□□□□ -1.21
HERPUD1-208	ENST00000563911	ZNF174	Q15697	407 aa		7.5	□□□□□ -1.21
HERPUD1-208	ENST00000563911	ATP13A4	Q4VNC1	1196 aa		7.5	□□□□□ -1.21
HERPUD1-208	ENST00000563911	KCTD1	Q719H9	257 aa		7.5	□□□□□ -1.21
HERPUD1-208	ENST00000563911	MCM10	Q7L590	875 aa		7.5	□□□□□ -1.21
HERPUD1-208	ENST00000563911	CEP89	Q96ST8	783 aa		7.5	□□□□□ -1.21
HERPUD1-208	ENST00000563911	ADARB2	Q9NS39	739 aa	Known RBP	7.5	□□□□□ -1.21
HERPUD1-208	ENST00000563911	RNF186	Q9NXI6	227 aa		7.5	□□□□□ -1.21
HERPUD1-208	ENST00000563911	H2AFY2	Q9P0M6	372 aa	Predicted RBP	7.5	□□□□□ -1.21
HERPUD1-208	ENST00000563911	MYOT	Q9UBF9	498 aa		7.5	□□□□□ -1.21
HERPUD1-208	ENST00000563911	PCDHB4	Q9Y5E5	795 aa		7.5	□□□□□ -1.21
HERPUD1-208	ENST00000563911	ATP23	Q9Y6H3	246 aa		7.5	□□□□□ -1.21
HERPUD1-208	ENST00000563911	ASTN2	O75129	1339 aa	Predicted RBP	7.5	□□□□□ -1.21
HERPUD1-208	ENST00000563911	MKI67	P46013	3256 aa	Known RBP	7.49	□□□□□ -1.21
HERPUD1-208	ENST00000563911	RAD17	O75943	681 aa		7.49	□□□□□ -1.21
HERPUD1-208	ENST00000563911	SNRPA1	P09661	255 aa	Known RBP	7.49	□□□□□ -1.21
HERPUD1-208	ENST00000563911	ZBTB48	P10074	688 aa	Predicted RBP	7.49	□□□□□ -1.21
HERPUD1-208	ENST00000563911	GPT	P24298	496 aa		7.49	□□□□□ -1.21
HERPUD1-208	ENST00000563911	KIF23	Q02241	960 aa	Predicted RBP	7.49	□□□□□ -1.21
HERPUD1-208	ENST00000563911	TUSC3	Q13454	348 aa		7.49	□□□□□ -1.21
HERPUD1-208	ENST00000563911	NR1I3	Q14994	352 aa		7.49	□□□□□ -1.21
HERPUD1-208	ENST00000563911	BRDT	Q58F21	947 aa	Predicted RBP	7.49	□□□□□ -1.21
HERPUD1-208	ENST00000563911	FIGN	Q5HY92	759 aa		7.49	□□□□□ -1.21
HERPUD1-208	ENST00000563911	CC2D1B	Q5T0F9	858 aa	Known RBP	7.49	□□□□□ -1.21
HERPUD1-208	ENST00000563911	CPZ	Q66K79	652 aa		7.49	□□□□□ -1.21
HERPUD1-208	ENST00000563911	ATG4D	Q86TL0	474 aa	Predicted RBP	7.49	□□□□□ -1.21
HERPUD1-208	ENST00000563911	SPATS2	Q86XZ4	545 aa	Known RBP	7.49	□□□□□ -1.21
HERPUD1-208	ENST00000563911	TRIM48	Q8IWZ4	208 aa		7.49	□□□□□ -1.21
HERPUD1-208	ENST00000563911	NGEF	Q8N5V2	710 aa		7.49	□□□□□ -1.21
HERPUD1-208	ENST00000563911	PHOSPHO1	Q8TCT1	267 aa		7.49	□□□□□ -1.21
HERPUD1-208	ENST00000563911	EMC7	Q9NPA0	242 aa		7.49	□□□□□ -1.21
HERPUD1-208	ENST00000563911	OAS3	Q9Y6K5	1087 aa	Known RBP	7.49	□□□□□ -1.21
HERPUD1-208	ENST00000563911	COL4A1	P02462	1669 aa		7.48	□□□□□ -1.21
HERPUD1-208	ENST00000563911	ADM5	C9JUS6	153 aa		7.48	□□□□□ -1.21
HERPUD1-208	ENST00000563911	PPIP5K2	O43314	1243 aa		7.48	□□□□□ -1.21
HERPUD1-208	ENST00000563911	CA12	O43570	354 aa		7.48	□□□□□ -1.21
HERPUD1-208	ENST00000563911	CLASP2	O75122	1294 aa	Known RBP	7.48	□□□□□ -1.21
HERPUD1-208	ENST00000563911	NTSR2	O95665	410 aa		7.48	□□□□□ -1.21
HERPUD1-208	ENST00000563911	LTF	P02788	710 aa		7.48	□□□□□ -1.21
HERPUD1-208	ENST00000563911	HUNK	P57058	714 aa		7.48	□□□□□ -1.21
HERPUD1-208	ENST00000563911	PLEKHG6	Q3KR16	790 aa		7.48	□□□□□ -1.21
HERPUD1-208	ENST00000563911	RIC1	Q4ADV7	1423 aa		7.48	□□□□□ -1.21
HERPUD1-208	ENST00000563911	PDE4DIP	Q5VU43	2346 aa		7.48	□□□□□ -1.21
HERPUD1-208	ENST00000563911	BTBD8	Q5XKL5	378 aa		7.48	□□□□□ -1.21
HERPUD1-208	ENST00000563911	IQSEC1	Q6DN90	963 aa		7.48	□□□□□ -1.21
HERPUD1-208	ENST00000563911	FSTL4	Q6MZW2	842 aa		7.48	□□□□□ -1.21
HERPUD1-208	ENST00000563911	NECAB2	Q7Z6G3	386 aa		7.48	□□□□□ -1.21
HERPUD1-208	ENST00000563911	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	7.48	□□□□□ -1.21
HERPUD1-208	ENST00000563911	PASD1	Q8IV76	773 aa		7.48	□□□□□ -1.21
HERPUD1-208	ENST00000563911	NOSTRIN	Q8IVI9	506 aa		7.48	□□□□□ -1.21
HERPUD1-208	ENST00000563911	ZNF34	Q8IZ26	560 aa		7.48	□□□□□ -1.21
HERPUD1-208	ENST00000563911	INTS4	Q96HW7	963 aa	Known RBP	7.48	□□□□□ -1.21
HERPUD1-208	ENST00000563911	CRAMP1	Q96RY5	1269 aa		7.48	□□□□□ -1.21
HERPUD1-208	ENST00000563911	RTFDC1	Q9BY42	306 aa	Predicted RBP	7.48	□□□□□ -1.21
HERPUD1-208	ENST00000563911	SLC6A17	Q9H1V8	727 aa		7.48	□□□□□ -1.21
HERPUD1-208	ENST00000563911	PCIF1	Q9H4Z3	704 aa		7.48	□□□□□ -1.21
HERPUD1-208	ENST00000563911	ASH2L	Q9UBL3	628 aa		7.48	□□□□□ -1.21
HERPUD1-208	ENST00000563911	ZNF652	Q9Y2D9	606 aa		7.48	□□□□□ -1.21
HERPUD1-208	ENST00000563911	KNSTRN	Q9Y448	316 aa		7.48	□□□□□ -1.21
HERPUD1-208	ENST00000563911	BIN1	O00499	593 aa		7.47	□□□□□ -1.21
HERPUD1-208	ENST00000563911	KATNA1	O75449	491 aa		7.47	□□□□□ -1.21
HERPUD1-208	ENST00000563911	SLC9A1	P19634	815 aa		7.47	□□□□□ -1.21
HERPUD1-208	ENST00000563911	PRKAR2B	P31323	418 aa		7.47	□□□□□ -1.21
HERPUD1-208	ENST00000563911	KIF11	P52732	1056 aa		7.47	□□□□□ -1.21
HERPUD1-208	ENST00000563911	PRR5	P85299	388 aa		7.47	□□□□□ -1.21
HERPUD1-208	ENST00000563911	EXOSC10	Q01780	885 aa	Known RBP	7.47	□□□□□ -1.21
HERPUD1-208	ENST00000563911	GRIN1	Q05586	938 aa		7.47	□□□□□ -1.21
HERPUD1-208	ENST00000563911	CNGB1	Q14028	1251 aa	Predicted RBP	7.47	□□□□□ -1.21
HERPUD1-208	ENST00000563911	TMEM132B	Q14DG7	1078 aa		7.47	□□□□□ -1.21
HERPUD1-208	ENST00000563911	CREB3L3	Q68CJ9	461 aa		7.47	□□□□□ -1.21
HERPUD1-208	ENST00000563911	RPTN	Q6XPR3	784 aa		7.47	□□□□□ -1.21
HERPUD1-208	ENST00000563911	EFHB	Q8N7U6	833 aa		7.47	□□□□□ -1.21
HERPUD1-208	ENST00000563911	KIAA1958	Q8N8K9	716 aa		7.47	□□□□□ -1.21
HERPUD1-208	ENST00000563911	CLEC4D	Q8WXI8	215 aa		7.47	□□□□□ -1.21
HERPUD1-208	ENST00000563911	SCYL1	Q96KG9	808 aa		7.47	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms