RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 TCHHQ07283 1943 aa7.68□□□□□ -1.18
SPG11-224ENST00000561268 FANCMQ8IYD8 2048 aa7.68□□□□□ -1.18
SPG11-224ENST00000561268 MUC6Q6W4X9 2439 aa7.67□□□□□ -1.18
SPG11-224ENST00000561268 KIF26AQ9ULI4 1882 aaPredicted RBP7.67□□□□□ -1.18
SPG11-224ENST00000561268 A0A087WZ62 844 aa7.67□□□□□ -1.18
SPG11-224ENST00000561268 CARNS1A5YM72 827 aa7.67□□□□□ -1.18
SPG11-224ENST00000561268 RIOK3O14730 519 aaKnown RBP7.67□□□□□ -1.18
SPG11-224ENST00000561268 MBTPS2O43462 519 aa7.67□□□□□ -1.18
SPG11-224ENST00000561268 OFD1O75665 1012 aa7.67□□□□□ -1.18
SPG11-224ENST00000561268 FGF18O76093 207 aa7.67□□□□□ -1.18
SPG11-224ENST00000561268 SLITRK3O94933 977 aa7.67□□□□□ -1.18
SPG11-224ENST00000561268 SPATA31C1P0DKV0 1188 aa7.67□□□□□ -1.18
SPG11-224ENST00000561268 NCLP19338 710 aaKnown RBP7.67□□□□□ -1.18
SPG11-224ENST00000561268 PPM1AP35813 382 aa7.67□□□□□ -1.18
SPG11-224ENST00000561268 PHKA2P46019 1235 aa7.67□□□□□ -1.18
SPG11-224ENST00000561268 RARRES1P49788 294 aa7.67□□□□□ -1.18
SPG11-224ENST00000561268 NPEPPSP55786 919 aa7.67□□□□□ -1.18
SPG11-224ENST00000561268 DLX2Q07687 328 aaPredicted RBP7.67□□□□□ -1.18
SPG11-224ENST00000561268 COASYQ13057 564 aa7.67□□□□□ -1.18
SPG11-224ENST00000561268 ADAM15Q13444 863 aa7.67□□□□□ -1.18
SPG11-224ENST00000561268 SMAD4Q13485 552 aaKnown RBP7.67□□□□□ -1.18
SPG11-224ENST00000561268 CALCRLQ16602 461 aa7.67□□□□□ -1.18
SPG11-224ENST00000561268 AMHR2Q16671 573 aa7.67□□□□□ -1.18
SPG11-224ENST00000561268 PTCRAQ6ISU1 281 aaPredicted RBP7.67□□□□□ -1.18
SPG11-224ENST00000561268 PDE12Q6L8Q7 609 aaKnown RBP7.67□□□□□ -1.18
SPG11-224ENST00000561268 TMEM184AQ6ZMB5 413 aa7.67□□□□□ -1.18
SPG11-224ENST00000561268 SRGAP1Q7Z6B7 1085 aa7.67□□□□□ -1.18
SPG11-224ENST00000561268 FERMT3Q86UX7 667 aa7.67□□□□□ -1.18
SPG11-224ENST00000561268 SLC39A11Q8N1S5 342 aa7.67□□□□□ -1.18
SPG11-224ENST00000561268 SPRYD3Q8NCJ5 442 aa7.67□□□□□ -1.18
SPG11-224ENST00000561268 FBXO18Q8NFZ0 1043 aa7.67□□□□□ -1.18
SPG11-224ENST00000561268 PSPC1Q8WXF1 523 aaKnown RBP7.67□□□□□ -1.18
SPG11-224ENST00000561268 SLC7A3Q8WY07 619 aa7.67□□□□□ -1.18
SPG11-224ENST00000561268 EIF2AK1Q9BQI3 630 aaKnown RBP7.67□□□□□ -1.18
SPG11-224ENST00000561268 SH2D3AQ9BRG2 576 aa7.67□□□□□ -1.18
SPG11-224ENST00000561268 FDXACB1Q9BRP7 624 aaPredicted RBP7.67□□□□□ -1.18
SPG11-224ENST00000561268 MRPL9Q9BYD2 267 aaKnown RBP7.67□□□□□ -1.18
SPG11-224ENST00000561268 PANK2Q9BZ23 570 aa7.67□□□□□ -1.18
SPG11-224ENST00000561268 GCOM2Q9BZD3 368 aaPredicted RBP7.67□□□□□ -1.18
SPG11-224ENST00000561268 INO80BQ9C086 356 aaPredicted RBP7.67□□□□□ -1.18
SPG11-224ENST00000561268 TMEM60Q9H2L4 133 aa7.67□□□□□ -1.18
SPG11-224ENST00000561268 FOXP1Q9H334 677 aaPredicted RBP7.67□□□□□ -1.18
SPG11-224ENST00000561268 ZSWIM4Q9H7M6 989 aa7.67□□□□□ -1.18
SPG11-224ENST00000561268 MINDY3Q9H8M7 445 aa7.67□□□□□ -1.18
SPG11-224ENST00000561268 ATP6V0A4Q9HBG4 840 aa7.67□□□□□ -1.18
SPG11-224ENST00000561268 ALG13Q9NP73 1137 aaKnown RBP7.67□□□□□ -1.18
SPG11-224ENST00000561268 TLR9Q9NR96 1032 aa7.67□□□□□ -1.18
SPG11-224ENST00000561268 ANKEF1Q9NU02 776 aa7.67□□□□□ -1.18
SPG11-224ENST00000561268 FAM105AQ9NUU6 356 aa7.67□□□□□ -1.18
SPG11-224ENST00000561268 RGL1Q9NZL6 768 aa7.67□□□□□ -1.18
SPG11-224ENST00000561268 LRFN2Q9ULH4 789 aa7.67□□□□□ -1.18
SPG11-224ENST00000561268 ZDHHC9Q9Y397 364 aa7.67□□□□□ -1.18
SPG11-224ENST00000561268 OBSL1O75147 1896 aa7.66□□□□□ -1.18
SPG11-224ENST00000561268 TBKBP1A7MCY6 615 aa7.66□□□□□ -1.18
SPG11-224ENST00000561268 LINC01565O15544 149 aa7.66□□□□□ -1.18
SPG11-224ENST00000561268 B4GALT3O60512 393 aa7.66□□□□□ -1.18
SPG11-224ENST00000561268 EFEMP2O95967 443 aa7.66□□□□□ -1.18
SPG11-224ENST00000561268 TPM3P06753 285 aa7.66□□□□□ -1.18
SPG11-224ENST00000561268 MUTP22033 750 aa7.66□□□□□ -1.18
SPG11-224ENST00000561268 FGFR4P22455 802 aa7.66□□□□□ -1.18
SPG11-224ENST00000561268 MSNP26038 577 aaKnown RBP7.66□□□□□ -1.18
SPG11-224ENST00000561268 U2AF2P26368 475 aaKnown RBP eCLIP7.66□□□□□ -1.18
SPG11-224ENST00000561268 HOXA11P31270 313 aaPredicted RBP7.66□□□□□ -1.18
SPG11-224ENST00000561268 GTF2F1P35269 517 aaKnown RBP eCLIP7.66□□□□□ -1.18
SPG11-224ENST00000561268 TRAPPC10P48553 1259 aa7.66□□□□□ -1.18
SPG11-224ENST00000561268 DNM2P50570 870 aa7.66□□□□□ -1.18
SPG11-224ENST00000561268 POLGP54098 1239 aaPredicted RBP7.66□□□□□ -1.18
SPG11-224ENST00000561268 PTENP60484 403 aa7.66□□□□□ -1.18
SPG11-224ENST00000561268 DUSP6Q16828 381 aa7.66□□□□□ -1.18
SPG11-224ENST00000561268 GLIPR1L2Q4G1C9 344 aa7.66□□□□□ -1.18
SPG11-224ENST00000561268 UBXN11Q5T124 520 aa7.66□□□□□ -1.18
SPG11-224ENST00000561268 CDCA2Q69YH5 1023 aaPredicted RBP7.66□□□□□ -1.18
SPG11-224ENST00000561268 MCTP1Q6DN14 999 aa7.66□□□□□ -1.18
SPG11-224ENST00000561268 NCAPH2Q6IBW4 605 aa7.66□□□□□ -1.18
SPG11-224ENST00000561268 KCNT2Q6UVM3 1135 aa7.66□□□□□ -1.18
SPG11-224ENST00000561268 TRMT1LQ7Z2T5 733 aaKnown RBP7.66□□□□□ -1.18
SPG11-224ENST00000561268 MRPL10Q7Z7H8 261 aaKnown RBP7.66□□□□□ -1.18
SPG11-224ENST00000561268 RHPN2Q8IUC4 686 aa7.66□□□□□ -1.18
SPG11-224ENST00000561268 CCDC83Q8IWF9 413 aa7.66□□□□□ -1.18
SPG11-224ENST00000561268 RNF168Q8IYW5 571 aaPredicted RBP7.66□□□□□ -1.18
SPG11-224ENST00000561268 VN1R2Q8NFZ6 395 aa7.66□□□□□ -1.18
SPG11-224ENST00000561268 TCP11Q8WWU5 503 aa7.66□□□□□ -1.18
SPG11-224ENST00000561268 NLRP7Q8WX94 980 aa7.66□□□□□ -1.18
SPG11-224ENST00000561268 SUSD6Q92537 303 aa7.66□□□□□ -1.18
SPG11-224ENST00000561268 MRPS27Q92552 414 aaKnown RBP7.66□□□□□ -1.18
SPG11-224ENST00000561268 PPP2R3CQ969Q6 453 aa7.66□□□□□ -1.18
SPG11-224ENST00000561268 RNF25Q96BH1 459 aaPredicted RBP7.66□□□□□ -1.18
SPG11-224ENST00000561268 CCDC51Q96ER9 411 aa7.66□□□□□ -1.18
SPG11-224ENST00000561268 DYDC2Q96IM9 177 aa7.66□□□□□ -1.18
SPG11-224ENST00000561268 CEP170P1Q96L14 293 aa7.66□□□□□ -1.18
SPG11-224ENST00000561268 CDCA3Q99618 268 aaPredicted RBP7.66□□□□□ -1.18
SPG11-224ENST00000561268 MTRQ99707 1265 aa7.66□□□□□ -1.18
SPG11-224ENST00000561268 TTC12Q9H892 705 aaPredicted RBP7.66□□□□□ -1.18
SPG11-224ENST00000561268 TUFT1Q9NNX1 390 aa7.66□□□□□ -1.18
SPG11-224ENST00000561268 RTN4Q9NQC3 1192 aaKnown RBP7.66□□□□□ -1.18
SPG11-224ENST00000561268 AAASQ9NRG9 546 aa7.66□□□□□ -1.18
SPG11-224ENST00000561268 TYW1Q9NV66 732 aaKnown RBP7.66□□□□□ -1.18
SPG11-224ENST00000561268 CLDND1Q9NY35 253 aa7.66□□□□□ -1.18
SPG11-224ENST00000561268 CLEC1BQ9P126 229 aa7.66□□□□□ -1.18
SPG11-224ENST00000561268 SUCLA2Q9P2R7 463 aaPredicted RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms