RNA–Protein interactions for RNA: ENST00000554698.5

SDR39U1-208, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 1 (best) BASIC

Gene SDR39U1, Length 1,364 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-208ENST00000554698 PANK4Q9NVE7 773 aa23.62■■□□□ 1.37
SDR39U1-208ENST00000554698 DACT1Q9NYF0 836 aa23.62■■□□□ 1.37
SDR39U1-208ENST00000554698 TRIOBPQ9H2D6 2365 aa23.62■■□□□ 1.37
SDR39U1-208ENST00000554698 CNTNAP2Q9UHC6 1331 aa23.61■■□□□ 1.37
SDR39U1-208ENST00000554698 PRPF40AO75400 957 aaKnown RBP23.61■■□□□ 1.37
SDR39U1-208ENST00000554698 PRKCBP05771 671 aa23.61■■□□□ 1.37
SDR39U1-208ENST00000554698 MYL1P05976 194 aa23.61■■□□□ 1.37
SDR39U1-208ENST00000554698 ARF4P18085 180 aaPredicted RBP23.61■■□□□ 1.37
SDR39U1-208ENST00000554698 ASIC1P78348 528 aa23.61■■□□□ 1.37
SDR39U1-208ENST00000554698 FAM189BP81408 668 aa23.61■■□□□ 1.37
SDR39U1-208ENST00000554698 NCBP1Q09161 790 aaKnown RBP23.61■■□□□ 1.37
SDR39U1-208ENST00000554698 FAM109BQ6ICB4 259 aaPredicted RBP23.61■■□□□ 1.37
SDR39U1-208ENST00000554698 FAM178BQ8IXR5 827 aa23.61■■□□□ 1.37
SDR39U1-208ENST00000554698 CCDC65Q8IXS2 484 aa23.61■■□□□ 1.37
SDR39U1-208ENST00000554698 TOP1MTQ969P6 601 aa23.61■■□□□ 1.37
SDR39U1-208ENST00000554698 BLZF1Q9H2G9 400 aa23.61■■□□□ 1.37
SDR39U1-208ENST00000554698 ST6GALNAC4Q9H4F1 302 aa23.61■■□□□ 1.37
SDR39U1-208ENST00000554698 OLFML3Q9NRN5 406 aa23.61■■□□□ 1.37
SDR39U1-208ENST00000554698 EDN1P05305 212 aa23.6■■□□□ 1.37
SDR39U1-208ENST00000554698 LIG1P18858 919 aa23.6■■□□□ 1.37
SDR39U1-208ENST00000554698 CASP1P29466 404 aa23.6■■□□□ 1.37
SDR39U1-208ENST00000554698 SARSP49591 514 aaKnown RBP23.6■■□□□ 1.37
SDR39U1-208ENST00000554698 CUL4BQ13620 913 aa23.6■■□□□ 1.37
SDR39U1-208ENST00000554698 HAUS6Q7Z4H7 955 aa23.6■■□□□ 1.37
SDR39U1-208ENST00000554698 HERC6Q8IVU3 1022 aa23.6■■□□□ 1.37
SDR39U1-208ENST00000554698 MYOCDQ8IZQ8 938 aa23.6■■□□□ 1.37
SDR39U1-208ENST00000554698 SLC17A8Q8NDX2 589 aa23.6■■□□□ 1.37
SDR39U1-208ENST00000554698 CCDC51Q96ER9 411 aa23.6■■□□□ 1.37
SDR39U1-208ENST00000554698 MICAL3Q7RTP6 2002 aa23.59■■□□□ 1.37
SDR39U1-208ENST00000554698 A0A0U1RQF3 1178 aa23.59■■□□□ 1.37
SDR39U1-208ENST00000554698 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.59■■□□□ 1.37
SDR39U1-208ENST00000554698 A0A1B0GUA9 196 aa23.59■■□□□ 1.37
SDR39U1-208ENST00000554698 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.59■■□□□ 1.37
SDR39U1-208ENST00000554698 TTLL13PA6NNM8 815 aa23.59■■□□□ 1.37
SDR39U1-208ENST00000554698 NR1I2O75469 434 aa23.59■■□□□ 1.37
SDR39U1-208ENST00000554698 PRPF4BQ13523 1007 aaKnown RBP23.59■■□□□ 1.37
SDR39U1-208ENST00000554698 HERC4Q5GLZ8 1057 aaPredicted RBP23.59■■□□□ 1.37
SDR39U1-208ENST00000554698 TWF2Q6IBS0 349 aaKnown RBP23.59■■□□□ 1.37
SDR39U1-208ENST00000554698 NOTUMQ6P988 496 aa23.59■■□□□ 1.37
SDR39U1-208ENST00000554698 TMCO2Q7Z6W1 182 aaPredicted RBP23.59■■□□□ 1.37
SDR39U1-208ENST00000554698 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.58■■□□□ 1.37
SDR39U1-208ENST00000554698 PVALEFA0A1B0GWK0 134 aa23.58■■□□□ 1.37
SDR39U1-208ENST00000554698 K7ENM7 598 aa23.58■■□□□ 1.37
SDR39U1-208ENST00000554698 GTPBP6O43824 516 aaPredicted RBP23.58■■□□□ 1.37
SDR39U1-208ENST00000554698 NMT1P30419 496 aaKnown RBP23.58■■□□□ 1.37
SDR39U1-208ENST00000554698 EHHADHQ08426 723 aa23.58■■□□□ 1.37
SDR39U1-208ENST00000554698 COASYQ13057 564 aa23.58■■□□□ 1.37
SDR39U1-208ENST00000554698 UBXN11Q5T124 520 aa23.58■■□□□ 1.37
SDR39U1-208ENST00000554698 KANK3Q6NY19 840 aa23.58■■□□□ 1.37
SDR39U1-208ENST00000554698 UNC13DQ70J99 1090 aa23.58■■□□□ 1.37
SDR39U1-208ENST00000554698 ZNF720Q7Z2F6 126 aa23.58■■□□□ 1.37
SDR39U1-208ENST00000554698 CPB2Q96IY4 423 aa23.58■■□□□ 1.37
SDR39U1-208ENST00000554698 TIGD1Q96MW7 591 aa23.58■■□□□ 1.37
SDR39U1-208ENST00000554698 LAMA3Q16787 3333 aa23.57■■□□□ 1.36
SDR39U1-208ENST00000554698 GRXCR1A8MXD5 290 aa23.57■■□□□ 1.36
SDR39U1-208ENST00000554698 GJB5O95377 273 aa23.57■■□□□ 1.36
SDR39U1-208ENST00000554698 ABCD1P33897 745 aa23.57■■□□□ 1.36
SDR39U1-208ENST00000554698 GTF2BQ00403 316 aa23.57■■□□□ 1.36
SDR39U1-208ENST00000554698 NT5DC1Q5TFE4 455 aa23.57■■□□□ 1.36
SDR39U1-208ENST00000554698 NPAS4Q8IUM7 802 aa23.57■■□□□ 1.36
SDR39U1-208ENST00000554698 CCDC34Q96HJ3 373 aa23.57■■□□□ 1.36
SDR39U1-208ENST00000554698 STRA6Q9BX79 667 aa23.57■■□□□ 1.36
SDR39U1-208ENST00000554698 ELAC1Q9H777 363 aaKnown RBP23.57■■□□□ 1.36
SDR39U1-208ENST00000554698 TBX20Q9UMR3 447 aa23.57■■□□□ 1.36
SDR39U1-208ENST00000554698 USP20Q9Y2K6 914 aa23.57■■□□□ 1.36
SDR39U1-208ENST00000554698 KLRC4O43908 158 aa23.56■■□□□ 1.36
SDR39U1-208ENST00000554698 ZNF623O75123 536 aa23.56■■□□□ 1.36
SDR39U1-208ENST00000554698 PPP1R37O75864 691 aa23.56■■□□□ 1.36
SDR39U1-208ENST00000554698 RAB27AP51159 221 aa23.56■■□□□ 1.36
SDR39U1-208ENST00000554698 SMAD3P84022 425 aaKnown RBP23.56■■□□□ 1.36
SDR39U1-208ENST00000554698 STRN3Q13033 797 aa23.56■■□□□ 1.36
SDR39U1-208ENST00000554698 ZNF598Q86UK7 904 aaKnown RBP23.56■■□□□ 1.36
SDR39U1-208ENST00000554698 ECHDC2Q86YB7 292 aa23.56■■□□□ 1.36
SDR39U1-208ENST00000554698 MRPL4Q9BYD3 311 aaKnown RBP23.56■■□□□ 1.36
SDR39U1-208ENST00000554698 PDZD7Q9H5P4 517 aa23.56■■□□□ 1.36
SDR39U1-208ENST00000554698 MRPL44Q9H9J2 332 aaKnown RBP23.56■■□□□ 1.36
SDR39U1-208ENST00000554698 FAM105AQ9NUU6 356 aa23.56■■□□□ 1.36
SDR39U1-208ENST00000554698 RNF216Q9NWF9 866 aaPredicted RBP23.56■■□□□ 1.36
SDR39U1-208ENST00000554698 TMEM161AQ9NX61 479 aa23.56■■□□□ 1.36
SDR39U1-208ENST00000554698 PRR29P0C7W0 189 aa23.55■■□□□ 1.36
SDR39U1-208ENST00000554698 STAG3L1P0CL83 205 aa23.55■■□□□ 1.36
SDR39U1-208ENST00000554698 SKIP12755 728 aa23.55■■□□□ 1.36
SDR39U1-208ENST00000554698 DPYDQ12882 1025 aa23.55■■□□□ 1.36
SDR39U1-208ENST00000554698 ZC2HC1CQ53FD0 456 aaPredicted RBP23.55■■□□□ 1.36
SDR39U1-208ENST00000554698 HABP4Q5JVS0 413 aaKnown RBP23.55■■□□□ 1.36
SDR39U1-208ENST00000554698 ATF7IP2Q5U623 682 aa23.55■■□□□ 1.36
SDR39U1-208ENST00000554698 SLC27A1Q6PCB7 646 aa23.55■■□□□ 1.36
SDR39U1-208ENST00000554698 ELOA2Q8IYF1 753 aaPredicted RBP23.55■■□□□ 1.36
SDR39U1-208ENST00000554698 HVCN1Q96D96 273 aa23.55■■□□□ 1.36
SDR39U1-208ENST00000554698 ACO2Q99798 780 aaKnown RBP23.55■■□□□ 1.36
SDR39U1-208ENST00000554698 LMBRD1Q9NUN5 540 aa23.55■■□□□ 1.36
SDR39U1-208ENST00000554698 TBC1D7Q9P0N9 293 aa23.55■■□□□ 1.36
SDR39U1-208ENST00000554698 TNFSF13BQ9Y275 285 aa23.55■■□□□ 1.36
SDR39U1-208ENST00000554698 PCDHB2Q9Y5E7 798 aa23.55■■□□□ 1.36
SDR39U1-208ENST00000554698 LAMA2P24043 3122 aaKnown RBP23.55■■□□□ 1.36
SDR39U1-208ENST00000554698 N4BP3O15049 544 aa23.54■■□□□ 1.36
SDR39U1-208ENST00000554698 UPP2O95045 317 aa23.54■■□□□ 1.36
SDR39U1-208ENST00000554698 ATF7P17544 494 aaPredicted RBP23.54■■□□□ 1.36
SDR39U1-208ENST00000554698 HTRA4P83105 476 aaPredicted RBP23.54■■□□□ 1.36
SDR39U1-208ENST00000554698 POSTNQ15063 836 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms