RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 NPEPPSP55786 919 aa13.29□□□□□ -0.28
GABPB1-206ENST00000543881 TMC5Q6UXY8 1006 aa13.29□□□□□ -0.28
GABPB1-206ENST00000543881 ZNF598Q86UK7 904 aaKnown RBP13.29□□□□□ -0.28
GABPB1-206ENST00000543881 CABP7Q86V35 215 aa13.29□□□□□ -0.28
GABPB1-206ENST00000543881 KSR1Q8IVT5 923 aa13.29□□□□□ -0.28
GABPB1-206ENST00000543881 FEZF2Q8TBJ5 459 aa13.29□□□□□ -0.28
GABPB1-206ENST00000543881 SLC22A17Q8WUG5 538 aa13.29□□□□□ -0.28
GABPB1-206ENST00000543881 GTF3C6Q969F1 213 aa13.29□□□□□ -0.28
GABPB1-206ENST00000543881 ACSF2Q96CM8 615 aaPredicted RBP13.29□□□□□ -0.28
GABPB1-206ENST00000543881 SCLT1Q96NL6 688 aa13.29□□□□□ -0.28
GABPB1-206ENST00000543881 FDXACB1Q9BRP7 624 aaPredicted RBP13.29□□□□□ -0.28
GABPB1-206ENST00000543881 MRPL9Q9BYD2 267 aaKnown RBP13.29□□□□□ -0.28
GABPB1-206ENST00000543881 ZBP1Q9H171 429 aa13.29□□□□□ -0.28
GABPB1-206ENST00000543881 GVINP1Q7Z2Y8 2422 aa13.28□□□□□ -0.28
GABPB1-206ENST00000543881 JAK2O60674 1132 aa13.28□□□□□ -0.28
GABPB1-206ENST00000543881 QARSP47897 775 aaKnown RBP13.28□□□□□ -0.28
GABPB1-206ENST00000543881 SPIRE1Q08AE8 756 aa13.28□□□□□ -0.28
GABPB1-206ENST00000543881 ST3GAL1Q11201 340 aa13.28□□□□□ -0.28
GABPB1-206ENST00000543881 TDGQ13569 410 aa13.28□□□□□ -0.28
GABPB1-206ENST00000543881 GIT2Q14161 759 aa13.28□□□□□ -0.28
GABPB1-206ENST00000543881 TMEM173Q86WV6 379 aaPredicted RBP13.28□□□□□ -0.28
GABPB1-206ENST00000543881 DTWD2Q8NBA8 298 aa13.28□□□□□ -0.28
GABPB1-206ENST00000543881 NSUN7Q8NE18 718 aaKnown RBP13.28□□□□□ -0.28
GABPB1-206ENST00000543881 RTP3Q9BQQ7 232 aa13.28□□□□□ -0.28
GABPB1-206ENST00000543881 GCOM2Q9BZD3 368 aaPredicted RBP13.28□□□□□ -0.28
GABPB1-206ENST00000543881 SUCLA2Q9P2R7 463 aaPredicted RBP13.28□□□□□ -0.28
GABPB1-206ENST00000543881 FBXL21Q9UKT6 434 aa13.28□□□□□ -0.28
GABPB1-206ENST00000543881 IRAK3Q9Y616 596 aa13.28□□□□□ -0.28
GABPB1-206ENST00000543881 WNT7AO00755 349 aa13.27□□□□□ -0.29
GABPB1-206ENST00000543881 TBX3O15119 743 aa13.27□□□□□ -0.29
GABPB1-206ENST00000543881 ZC3H11AO75152 810 aaKnown RBP eCLIP13.27□□□□□ -0.29
GABPB1-206ENST00000543881 CTSAP10619 480 aa13.27□□□□□ -0.29
GABPB1-206ENST00000543881 DNM2P50570 870 aa13.27□□□□□ -0.29
GABPB1-206ENST00000543881 NEK4P51957 841 aa13.27□□□□□ -0.29
GABPB1-206ENST00000543881 POLGP54098 1239 aaPredicted RBP13.27□□□□□ -0.29
GABPB1-206ENST00000543881 OTOP3Q7RTS5 596 aa13.27□□□□□ -0.29
GABPB1-206ENST00000543881 RHPN2Q8IUC4 686 aa13.27□□□□□ -0.29
GABPB1-206ENST00000543881 SIX5Q8N196 739 aa13.27□□□□□ -0.29
GABPB1-206ENST00000543881 DACT1Q9NYF0 836 aa13.27□□□□□ -0.29
GABPB1-206ENST00000543881 RGL1Q9NZL6 768 aa13.27□□□□□ -0.29
GABPB1-206ENST00000543881 DUSP12Q9UNI6 340 aa13.27□□□□□ -0.29
GABPB1-206ENST00000543881 ZBTB39O15060 712 aa13.26□□□□□ -0.29
GABPB1-206ENST00000543881 P4HBP07237 508 aaKnown RBP13.26□□□□□ -0.29
GABPB1-206ENST00000543881 KRT2P35908 639 aa13.26□□□□□ -0.29
GABPB1-206ENST00000543881 CDC42EP1Q00587 391 aa13.26□□□□□ -0.29
GABPB1-206ENST00000543881 EPHA7Q15375 998 aa13.26□□□□□ -0.29
GABPB1-206ENST00000543881 NCAPH2Q6IBW4 605 aa13.26□□□□□ -0.29
GABPB1-206ENST00000543881 CCDC149Q6ZUS6 474 aa13.26□□□□□ -0.29
GABPB1-206ENST00000543881 GPR149Q86SP6 731 aa13.26□□□□□ -0.29
GABPB1-206ENST00000543881 DDX53Q86TM3 631 aaKnown RBP13.26□□□□□ -0.29
GABPB1-206ENST00000543881 ZNF410Q86VK4 478 aa13.26□□□□□ -0.29
GABPB1-206ENST00000543881 KCNG4Q8TDN1 519 aa13.26□□□□□ -0.29
GABPB1-206ENST00000543881 WASF1Q92558 559 aa13.26□□□□□ -0.29
GABPB1-206ENST00000543881 IGSF21Q96ID5 467 aa13.26□□□□□ -0.29
GABPB1-206ENST00000543881 DYDC2Q96IM9 177 aa13.26□□□□□ -0.29
GABPB1-206ENST00000543881 NLRP4Q96MN2 994 aa13.26□□□□□ -0.29
GABPB1-206ENST00000543881 SFXN1Q9H9B4 322 aa13.26□□□□□ -0.29
GABPB1-206ENST00000543881 KCNK12Q9HB15 430 aa13.26□□□□□ -0.29
GABPB1-206ENST00000543881 IFT122Q9HBG6 1241 aa13.26□□□□□ -0.29
GABPB1-206ENST00000543881 C2orf16Q68DN1 1984 aa13.25□□□□□ -0.29
GABPB1-206ENST00000543881 SPDYE4A6NLX3 237 aa13.25□□□□□ -0.29
GABPB1-206ENST00000543881 BTBD18B2RXH4 712 aa13.25□□□□□ -0.29
GABPB1-206ENST00000543881 PHKA2P46019 1235 aa13.25□□□□□ -0.29
GABPB1-206ENST00000543881 FOSBP53539 338 aa13.25□□□□□ -0.29
GABPB1-206ENST00000543881 CTTNQ14247 550 aaKnown RBP13.25□□□□□ -0.29
GABPB1-206ENST00000543881 PPFIBP1Q86W92 1011 aa13.25□□□□□ -0.29
GABPB1-206ENST00000543881 C4orf19Q8IY42 314 aa13.25□□□□□ -0.29
GABPB1-206ENST00000543881 BCL7CQ8WUZ0 217 aaPredicted RBP13.25□□□□□ -0.29
GABPB1-206ENST00000543881 PRPF31Q8WWY3 499 aaKnown RBP13.25□□□□□ -0.29
GABPB1-206ENST00000543881 TMEM143Q96AN5 459 aa13.25□□□□□ -0.29
GABPB1-206ENST00000543881 RMDN1Q96DB5 314 aa13.25□□□□□ -0.29
GABPB1-206ENST00000543881 CEP170P1Q96L14 293 aa13.25□□□□□ -0.29
GABPB1-206ENST00000543881 NAP1L4Q99733 375 aaKnown RBP13.25□□□□□ -0.29
GABPB1-206ENST00000543881 LXNQ9BS40 222 aa13.25□□□□□ -0.29
GABPB1-206ENST00000543881 TRAIPQ9BWF2 469 aa13.25□□□□□ -0.29
GABPB1-206ENST00000543881 DHX33Q9H6R0 707 aaKnown RBP13.25□□□□□ -0.29
GABPB1-206ENST00000543881 CHST12Q9NRB3 414 aa13.25□□□□□ -0.29
GABPB1-206ENST00000543881 BMP2KQ9NSY1 1161 aaPredicted RBP13.25□□□□□ -0.29
GABPB1-206ENST00000543881 CACNA1AO00555 2505 aa13.24□□□□□ -0.29
GABPB1-206ENST00000543881 MED19A0JLT2 244 aaPredicted RBP13.24□□□□□ -0.29
GABPB1-206ENST00000543881 CARNS1A5YM72 827 aa13.24□□□□□ -0.29
GABPB1-206ENST00000543881 MEIS3P2A8K0S8 358 aa13.24□□□□□ -0.29
GABPB1-206ENST00000543881 STK25O00506 426 aa13.24□□□□□ -0.29
GABPB1-206ENST00000543881 LMNAP02545 664 aaKnown RBP13.24□□□□□ -0.29
GABPB1-206ENST00000543881 GALTP07902 379 aa13.24□□□□□ -0.29
GABPB1-206ENST00000543881 SFPQP23246 707 aaKnown RBP eCLIP13.24□□□□□ -0.29
GABPB1-206ENST00000543881 YWHABP31946 246 aaKnown RBP13.24□□□□□ -0.29
GABPB1-206ENST00000543881 CYP4A11Q02928 519 aa13.24□□□□□ -0.29
GABPB1-206ENST00000543881 LONRF3Q496Y0 759 aa13.24□□□□□ -0.29
GABPB1-206ENST00000543881 RSPH1Q8WYR4 309 aa13.24□□□□□ -0.29
GABPB1-206ENST00000543881 LPPQ93052 612 aa13.24□□□□□ -0.29
GABPB1-206ENST00000543881 JPH2Q9BR39 696 aaPredicted RBP13.24□□□□□ -0.29
GABPB1-206ENST00000543881 SEMA4AQ9H3S1 761 aa13.24□□□□□ -0.29
GABPB1-206ENST00000543881 NRDE2Q9H7Z3 1164 aa13.24□□□□□ -0.29
GABPB1-206ENST00000543881 MINDY3Q9H8M7 445 aa13.24□□□□□ -0.29
GABPB1-206ENST00000543881 PIN4Q9Y237 131 aaKnown RBP13.24□□□□□ -0.29
GABPB1-206ENST00000543881 COL4A3BPQ9Y5P4 624 aa13.24□□□□□ -0.29
GABPB1-206ENST00000543881 MARCH6O60337 910 aa13.23□□□□□ -0.29
GABPB1-206ENST00000543881 DKC1O60832 514 aaKnown RBP eCLIP13.23□□□□□ -0.29
GABPB1-206ENST00000543881 SLITRK3O94933 977 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms