RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 RAB27AP51159 221 aa21.42■■□□□ 1.02
DDX55-207ENST00000540763 CACNB1Q02641 598 aaPredicted RBP21.42■■□□□ 1.02
DDX55-207ENST00000540763 FNDC1Q4ZHG4 1894 aaPredicted RBP21.42■■□□□ 1.02
DDX55-207ENST00000540763 NPAS4Q8IUM7 802 aa21.42■■□□□ 1.02
DDX55-207ENST00000540763 MYOCDQ8IZQ8 938 aa21.42■■□□□ 1.02
DDX55-207ENST00000540763 CRIPAKQ8N1N5 446 aa21.42■■□□□ 1.02
DDX55-207ENST00000540763 TRIM9Q9C026 710 aa21.42■■□□□ 1.02
DDX55-207ENST00000540763 GOLPH3LQ9H4A5 285 aa21.42■■□□□ 1.02
DDX55-207ENST00000540763 POLD4Q9HCU8 107 aa21.42■■□□□ 1.02
DDX55-207ENST00000540763 A0A0C4DFX4 3053 aa21.41■■□□□ 1.02
DDX55-207ENST00000540763 SFI1A8K8P3 1242 aa21.41■■□□□ 1.02
DDX55-207ENST00000540763 ACKR2O00590 384 aa21.41■■□□□ 1.02
DDX55-207ENST00000540763 PRKCBP05771 671 aa21.41■■□□□ 1.02
DDX55-207ENST00000540763 STAG3L1P0CL83 205 aa21.41■■□□□ 1.02
DDX55-207ENST00000540763 HOXA11P31270 313 aaPredicted RBP21.41■■□□□ 1.02
DDX55-207ENST00000540763 FAM189BP81408 668 aa21.41■■□□□ 1.02
DDX55-207ENST00000540763 RAB30Q15771 203 aa21.41■■□□□ 1.02
DDX55-207ENST00000540763 NOTUMQ6P988 496 aa21.41■■□□□ 1.02
DDX55-207ENST00000540763 DYMQ7RTS9 669 aa21.41■■□□□ 1.02
DDX55-207ENST00000540763 MYCT1Q8N699 235 aa21.41■■□□□ 1.02
DDX55-207ENST00000540763 TMEM161BQ8NDZ6 487 aa21.41■■□□□ 1.02
DDX55-207ENST00000540763 C7orf25Q9BPX7 421 aa21.41■■□□□ 1.02
DDX55-207ENST00000540763 KIFC3Q9BVG8 833 aa21.41■■□□□ 1.02
DDX55-207ENST00000540763 PCDHA11Q9Y5I1 949 aa21.41■■□□□ 1.02
DDX55-207ENST00000540763 RALGAPA2Q2PPJ7 1873 aa21.41■■□□□ 1.02
DDX55-207ENST00000540763 A0A0U1RQF3 1178 aa21.4■■□□□ 1.02
DDX55-207ENST00000540763 K7ERI5 159 aa21.4■■□□□ 1.02
DDX55-207ENST00000540763 TRAK2O60296 914 aa21.4■■□□□ 1.02
DDX55-207ENST00000540763 ARF4P18085 180 aaPredicted RBP21.4■■□□□ 1.02
DDX55-207ENST00000540763 CCDC65Q8IXS2 484 aa21.4■■□□□ 1.02
DDX55-207ENST00000540763 RSPH1Q8WYR4 309 aa21.4■■□□□ 1.02
DDX55-207ENST00000540763 CCDC34Q96HJ3 373 aa21.4■■□□□ 1.02
DDX55-207ENST00000540763 ST6GALNAC4Q9H4F1 302 aa21.4■■□□□ 1.02
DDX55-207ENST00000540763 OLFML3Q9NRN5 406 aa21.4■■□□□ 1.02
DDX55-207ENST00000540763 SERTAD1Q9UHV2 236 aa21.4■■□□□ 1.02
DDX55-207ENST00000540763 NLRC5Q86WI3 1866 aa21.39■■□□□ 1.02
DDX55-207ENST00000540763 SLC16A4O15374 487 aa21.39■■□□□ 1.01
DDX55-207ENST00000540763 HTRA4P83105 476 aaPredicted RBP21.39■■□□□ 1.01
DDX55-207ENST00000540763 LONRF3Q496Y0 759 aa21.39■■□□□ 1.01
DDX55-207ENST00000540763 TWF2Q6IBS0 349 aaKnown RBP21.39■■□□□ 1.01
DDX55-207ENST00000540763 FAM178BQ8IXR5 827 aa21.39■■□□□ 1.01
DDX55-207ENST00000540763 FIZ1Q96SL8 496 aa21.39■■□□□ 1.01
DDX55-207ENST00000540763 TMEM161AQ9NX61 479 aa21.39■■□□□ 1.01
DDX55-207ENST00000540763 TMEM265A0A087WTH1 108 aa21.38■■□□□ 1.01
DDX55-207ENST00000540763 A0A1B0GUA9 196 aa21.38■■□□□ 1.01
DDX55-207ENST00000540763 ZNF623O75123 536 aa21.38■■□□□ 1.01
DDX55-207ENST00000540763 ZNF202O95125 648 aa21.38■■□□□ 1.01
DDX55-207ENST00000540763 EOMESO95936 686 aa21.38■■□□□ 1.01
DDX55-207ENST00000540763 FAM160A1Q05DH4 1040 aa21.38■■□□□ 1.01
DDX55-207ENST00000540763 PRPF4BQ13523 1007 aaKnown RBP21.38■■□□□ 1.01
DDX55-207ENST00000540763 ZNF697Q5TEC3 545 aa21.38■■□□□ 1.01
DDX55-207ENST00000540763 KANK3Q6NY19 840 aa21.38■■□□□ 1.01
DDX55-207ENST00000540763 KRBA2Q6ZNG9 492 aa21.38■■□□□ 1.01
DDX55-207ENST00000540763 HAUS6Q7Z4H7 955 aa21.38■■□□□ 1.01
DDX55-207ENST00000540763 ECHDC2Q86YB7 292 aa21.38■■□□□ 1.01
DDX55-207ENST00000540763 FMR1NBQ8N0W7 255 aaPredicted RBP21.38■■□□□ 1.01
DDX55-207ENST00000540763 CNNM3Q8NE01 707 aa21.38■■□□□ 1.01
DDX55-207ENST00000540763 HVCN1Q96D96 273 aa21.38■■□□□ 1.01
DDX55-207ENST00000540763 GUCD1Q96NT3 240 aa21.38■■□□□ 1.01
DDX55-207ENST00000540763 RAD9AQ99638 391 aa21.38■■□□□ 1.01
DDX55-207ENST00000540763 PBX4Q9BYU1 374 aa21.38■■□□□ 1.01
DDX55-207ENST00000540763 ZHX3Q9H4I2 956 aa21.38■■□□□ 1.01
DDX55-207ENST00000540763 FAM105AQ9NUU6 356 aa21.38■■□□□ 1.01
DDX55-207ENST00000540763 PANK4Q9NVE7 773 aa21.38■■□□□ 1.01
DDX55-207ENST00000540763 INSL6Q9Y581 213 aa21.38■■□□□ 1.01
DDX55-207ENST00000540763 K7ENM7 598 aa21.37■■□□□ 1.01
DDX55-207ENST00000540763 N4BP3O15049 544 aa21.37■■□□□ 1.01
DDX55-207ENST00000540763 B4GALT5O43286 388 aa21.37■■□□□ 1.01
DDX55-207ENST00000540763 HOXA2O43364 376 aa21.37■■□□□ 1.01
DDX55-207ENST00000540763 IDEP14735 1019 aa21.37■■□□□ 1.01
DDX55-207ENST00000540763 UBE2HP62256 183 aa21.37■■□□□ 1.01
DDX55-207ENST00000540763 ASIC1P78348 528 aa21.37■■□□□ 1.01
DDX55-207ENST00000540763 STRN3Q13033 797 aa21.37■■□□□ 1.01
DDX55-207ENST00000540763 ALCAMQ13740 583 aa21.37■■□□□ 1.01
DDX55-207ENST00000540763 SLC27A1Q6PCB7 646 aa21.37■■□□□ 1.01
DDX55-207ENST00000540763 UNC13DQ70J99 1090 aa21.37■■□□□ 1.01
DDX55-207ENST00000540763 TAS1R3Q7RTX0 852 aa21.37■■□□□ 1.01
DDX55-207ENST00000540763 ZNF598Q86UK7 904 aaKnown RBP21.37■■□□□ 1.01
DDX55-207ENST00000540763 SFR1Q86XK3 245 aa21.37■■□□□ 1.01
DDX55-207ENST00000540763 ENGASEQ8NFI3 743 aa21.37■■□□□ 1.01
DDX55-207ENST00000540763 STAMQ92783 540 aa21.37■■□□□ 1.01
DDX55-207ENST00000540763 PAGE5Q96GU1 130 aa21.37■■□□□ 1.01
DDX55-207ENST00000540763 FAM161BQ96MY7 647 aa21.37■■□□□ 1.01
DDX55-207ENST00000540763 ZBED2Q9BTP6 218 aa21.37■■□□□ 1.01
DDX55-207ENST00000540763 MRPL4Q9BYD3 311 aaKnown RBP21.37■■□□□ 1.01
DDX55-207ENST00000540763 RC3H2Q9HBD1 1191 aaKnown RBP21.37■■□□□ 1.01
DDX55-207ENST00000540763 MSRAQ9UJ68 235 aa21.37■■□□□ 1.01
DDX55-207ENST00000540763 LRFN2Q9ULH4 789 aa21.37■■□□□ 1.01
DDX55-207ENST00000540763 PCDHB7Q9Y5E2 793 aa21.37■■□□□ 1.01
DDX55-207ENST00000540763 LAMA2P24043 3122 aaKnown RBP21.36■■□□□ 1.01
DDX55-207ENST00000540763 PVALEFA0A1B0GWK0 134 aa21.36■■□□□ 1.01
DDX55-207ENST00000540763 GRXCR1A8MXD5 290 aa21.36■■□□□ 1.01
DDX55-207ENST00000540763 RBAK-RBAKDNI3L0D1 243 aa21.36■■□□□ 1.01
DDX55-207ENST00000540763 TLL1O43897 1013 aa21.36■■□□□ 1.01
DDX55-207ENST00000540763 DGKIO75912 1065 aa21.36■■□□□ 1.01
DDX55-207ENST00000540763 DNAJB2P25686 324 aa21.36■■□□□ 1.01
DDX55-207ENST00000540763 GTF2BQ00403 316 aa21.36■■□□□ 1.01
DDX55-207ENST00000540763 UBXN11Q5T124 520 aa21.36■■□□□ 1.01
DDX55-207ENST00000540763 APBB1IPQ7Z5R6 666 aaPredicted RBP21.36■■□□□ 1.01
DDX55-207ENST00000540763 SP7Q8TDD2 431 aaPredicted RBP21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms