RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 KIAA1755Q5JYT7 1200 aa19.38■□□□□ 0.69
RAB40C-203ENST00000535977 THEMIS2Q5TEJ8 643 aa19.38■□□□□ 0.69
RAB40C-203ENST00000535977 MAATS1Q7Z4T9 603 aa19.38■□□□□ 0.69
RAB40C-203ENST00000535977 USP38Q8NB14 1042 aa19.38■□□□□ 0.69
RAB40C-203ENST00000535977 CCT6BQ92526 530 aa19.38■□□□□ 0.69
RAB40C-203ENST00000535977 IRAK4Q9NWZ3 460 aa19.38■□□□□ 0.69
RAB40C-203ENST00000535977 L3MBTL1Q9Y468 752 aa19.38■□□□□ 0.69
RAB40C-203ENST00000535977 LOXHD1Q8IVV2 1947 aa19.38■□□□□ 0.69
RAB40C-203ENST00000535977 KIF4AO95239 1232 aa19.38■□□□□ 0.69
RAB40C-203ENST00000535977 LMNB1P20700 586 aa19.38■□□□□ 0.69
RAB40C-203ENST00000535977 RFX1P22670 979 aa19.38■□□□□ 0.69
RAB40C-203ENST00000535977 NMT1P30419 496 aaKnown RBP19.38■□□□□ 0.69
RAB40C-203ENST00000535977 TNIP1Q15025 636 aa19.38■□□□□ 0.69
RAB40C-203ENST00000535977 B3GNT9Q6UX72 402 aa19.38■□□□□ 0.69
RAB40C-203ENST00000535977 NIPA1Q7RTP0 329 aa19.38■□□□□ 0.69
RAB40C-203ENST00000535977 C1orf131Q8NDD1 294 aaKnown RBP19.38■□□□□ 0.69
RAB40C-203ENST00000535977 ACTRT1Q8TDG2 376 aa19.38■□□□□ 0.69
RAB40C-203ENST00000535977 VPS33BQ9H267 617 aa19.38■□□□□ 0.69
RAB40C-203ENST00000535977 ZMYM2Q9UBW7 1377 aa19.38■□□□□ 0.69
RAB40C-203ENST00000535977 MAPTP10636 758 aaKnown RBP19.38■□□□□ 0.69
RAB40C-203ENST00000535977 TMOD1P28289 359 aa19.38■□□□□ 0.69
RAB40C-203ENST00000535977 RPS6KA3P51812 740 aa19.38■□□□□ 0.69
RAB40C-203ENST00000535977 FAM83AQ86UY5 434 aa19.38■□□□□ 0.69
RAB40C-203ENST00000535977 TAX1BP1Q86VP1 789 aa19.38■□□□□ 0.69
RAB40C-203ENST00000535977 MREGQ8N565 214 aa19.38■□□□□ 0.69
RAB40C-203ENST00000535977 GMLQ99445 158 aa19.38■□□□□ 0.69
RAB40C-203ENST00000535977 TMEM59LQ9UK28 342 aa19.38■□□□□ 0.69
RAB40C-203ENST00000535977 SFI1A8K8P3 1242 aa19.37■□□□□ 0.69
RAB40C-203ENST00000535977 CHMP2AO43633 222 aa19.37■□□□□ 0.69
RAB40C-203ENST00000535977 FMO5P49326 533 aa19.37■□□□□ 0.69
RAB40C-203ENST00000535977 RAB27AP51159 221 aa19.37■□□□□ 0.69
RAB40C-203ENST00000535977 KCNA1Q09470 495 aa19.37■□□□□ 0.69
RAB40C-203ENST00000535977 ARFGAP2Q8N6H7 521 aa19.37■□□□□ 0.69
RAB40C-203ENST00000535977 LRRC57Q8N9N7 239 aa19.37■□□□□ 0.69
RAB40C-203ENST00000535977 MTMR14Q8NCE2 650 aa19.37■□□□□ 0.69
RAB40C-203ENST00000535977 TMEM174Q8WUU8 243 aa19.37■□□□□ 0.69
RAB40C-203ENST00000535977 ZNF570Q96NI8 536 aa19.37■□□□□ 0.69
RAB40C-203ENST00000535977 FIZ1Q96SL8 496 aa19.37■□□□□ 0.69
RAB40C-203ENST00000535977 MXRA8Q9BRK3 442 aa19.37■□□□□ 0.69
RAB40C-203ENST00000535977 YIPF3Q9GZM5 350 aa19.37■□□□□ 0.69
RAB40C-203ENST00000535977 TMBIM4Q9HC24 238 aa19.37■□□□□ 0.69
RAB40C-203ENST00000535977 EPB41L5Q9HCM4 733 aa19.37■□□□□ 0.69
RAB40C-203ENST00000535977 PLAAQ9Y263 795 aa19.37■□□□□ 0.69
RAB40C-203ENST00000535977 ARHGEF35A5YM69 484 aa19.37■□□□□ 0.69
RAB40C-203ENST00000535977 TAL1P17542 331 aaPredicted RBP19.37■□□□□ 0.69
RAB40C-203ENST00000535977 SOX5P35711 763 aa19.37■□□□□ 0.69
RAB40C-203ENST00000535977 ODR4Q5SWX8 454 aa19.37■□□□□ 0.69
RAB40C-203ENST00000535977 LDHDQ86WU2 507 aa19.37■□□□□ 0.69
RAB40C-203ENST00000535977 SAMD3Q8N6K7 520 aa19.37■□□□□ 0.69
RAB40C-203ENST00000535977 WHAMMQ8TF30 809 aa19.37■□□□□ 0.69
RAB40C-203ENST00000535977 PSMD1Q99460 953 aa19.37■□□□□ 0.69
RAB40C-203ENST00000535977 UNC45AQ9H3U1 944 aa19.37■□□□□ 0.69
RAB40C-203ENST00000535977 SLC12A6Q9UHW9 1150 aa19.37■□□□□ 0.69
RAB40C-203ENST00000535977 C5orf60A6NFR6 353 aa19.36■□□□□ 0.69
RAB40C-203ENST00000535977 IPO5O00410 1097 aaKnown RBP19.36■□□□□ 0.69
RAB40C-203ENST00000535977 CAND2O75155 1236 aa19.36■□□□□ 0.69
RAB40C-203ENST00000535977 HEXIM1O94992 359 aaKnown RBP19.36■□□□□ 0.69
RAB40C-203ENST00000535977 GUCY2DQ02846 1103 aa19.36■□□□□ 0.69
RAB40C-203ENST00000535977 CRELD2Q6UXH1 353 aaPredicted RBP19.36■□□□□ 0.69
RAB40C-203ENST00000535977 SLFN11Q7Z7L1 901 aa19.36■□□□□ 0.69
RAB40C-203ENST00000535977 TPCN2Q8NHX9 752 aa19.36■□□□□ 0.69
RAB40C-203ENST00000535977 AGPAT3Q9NRZ7 376 aa19.36■□□□□ 0.69
RAB40C-203ENST00000535977 SUCLA2Q9P2R7 463 aaPredicted RBP19.36■□□□□ 0.69
RAB40C-203ENST00000535977 CAP2P40123 477 aa19.36■□□□□ 0.69
RAB40C-203ENST00000535977 HSD17B4P51659 736 aa19.36■□□□□ 0.69
RAB40C-203ENST00000535977 TCP11Q8WWU5 503 aa19.36■□□□□ 0.69
RAB40C-203ENST00000535977 KDM4CQ9H3R0 1056 aa19.36■□□□□ 0.69
RAB40C-203ENST00000535977 CLRN2A0PK11 232 aa19.35■□□□□ 0.69
RAB40C-203ENST00000535977 SOCS7O14512 581 aa19.35■□□□□ 0.69
RAB40C-203ENST00000535977 KCNK3O14649 394 aa19.35■□□□□ 0.69
RAB40C-203ENST00000535977 GHRP10912 638 aa19.35■□□□□ 0.69
RAB40C-203ENST00000535977 R3HDM1Q15032 1099 aaKnown RBP19.35■□□□□ 0.69
RAB40C-203ENST00000535977 ZC3H12AQ5D1E8 599 aaKnown RBP19.35■□□□□ 0.69
RAB40C-203ENST00000535977 MCF2L2Q86YR7 1114 aa19.35■□□□□ 0.69
RAB40C-203ENST00000535977 STRA6Q9BX79 667 aa19.35■□□□□ 0.69
RAB40C-203ENST00000535977 TMEM206Q9H813 350 aa19.35■□□□□ 0.69
RAB40C-203ENST00000535977 MAP3K20Q9NYL2 800 aaKnown RBP19.35■□□□□ 0.69
RAB40C-203ENST00000535977 CNTNAP1P78357 1384 aa19.35■□□□□ 0.69
RAB40C-203ENST00000535977 CCDC188H7C350 402 aa19.35■□□□□ 0.69
RAB40C-203ENST00000535977 ASNSP08243 561 aa19.35■□□□□ 0.69
RAB40C-203ENST00000535977 ARP10275 920 aa19.35■□□□□ 0.69
RAB40C-203ENST00000535977 ZC2HC1CQ53FD0 456 aaPredicted RBP19.35■□□□□ 0.69
RAB40C-203ENST00000535977 DIS3Q9Y2L1 958 aaKnown RBP19.35■□□□□ 0.69
RAB40C-203ENST00000535977 DDX3XO00571 662 aaKnown RBP eCLIP19.34■□□□□ 0.692e-7■■■■■ 28.9
RAB40C-203ENST00000535977 ICAM1P05362 532 aa19.34■□□□□ 0.69
RAB40C-203ENST00000535977 CLTAP09496 248 aa19.34■□□□□ 0.69
RAB40C-203ENST00000535977 SLC30A5Q8TAD4 765 aa19.34■□□□□ 0.69
RAB40C-203ENST00000535977 SCFD2Q8WU76 684 aa19.34■□□□□ 0.69
RAB40C-203ENST00000535977 P3H4Q92791 437 aa19.34■□□□□ 0.69
RAB40C-203ENST00000535977 KRT12Q99456 494 aa19.34■□□□□ 0.69
RAB40C-203ENST00000535977 LXNQ9BS40 222 aa19.34■□□□□ 0.69
RAB40C-203ENST00000535977 LARSQ9P2J5 1176 aaKnown RBP19.34■□□□□ 0.69
RAB40C-203ENST00000535977 CORO1CQ9ULV4 474 aaPredicted RBP19.34■□□□□ 0.69
RAB40C-203ENST00000535977 GOLGA6L10A6NI86 522 aa19.34■□□□□ 0.69
RAB40C-203ENST00000535977 F8VZ95 297 aa19.34■□□□□ 0.69
RAB40C-203ENST00000535977 P4HBP07237 508 aaKnown RBP19.34■□□□□ 0.69
RAB40C-203ENST00000535977 PTGER2P43116 358 aa19.34■□□□□ 0.69
RAB40C-203ENST00000535977 SNRPFP62306 86 aaKnown RBP19.34■□□□□ 0.69
RAB40C-203ENST00000535977 MAP3K10Q02779 954 aa19.34■□□□□ 0.69
RAB40C-203ENST00000535977 GKAP1Q5VSY0 366 aaPredicted RBP19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms