RNA–Protein interactions for RNA: ENST00000525918.1

VPS26B-203, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-203ENST00000525918 SRGAP1Q7Z6B7 1085 aa11.96□□□□□ -0.49
VPS26B-203ENST00000525918 MRPL10Q7Z7H8 261 aaKnown RBP11.96□□□□□ -0.49
VPS26B-203ENST00000525918 ZNF280BQ86YH2 543 aa11.96□□□□□ -0.49
VPS26B-203ENST00000525918 BCL7CQ8WUZ0 217 aaPredicted RBP11.96□□□□□ -0.49
VPS26B-203ENST00000525918 PRPF31Q8WWY3 499 aaKnown RBP11.96□□□□□ -0.49
VPS26B-203ENST00000525918 ACSF2Q96CM8 615 aaPredicted RBP11.96□□□□□ -0.49
VPS26B-203ENST00000525918 FAM20AQ96MK3 541 aa11.96□□□□□ -0.49
VPS26B-203ENST00000525918 FAM193BQ96PV7 902 aaPredicted RBP11.96□□□□□ -0.49
VPS26B-203ENST00000525918 EMILIN2Q9BXX0 1053 aa11.96□□□□□ -0.49
VPS26B-203ENST00000525918 SFXN1Q9H9B4 322 aa11.96□□□□□ -0.49
VPS26B-203ENST00000525918 FAN1Q9Y2M0 1017 aa11.96□□□□□ -0.49
VPS26B-203ENST00000525918 CYP46A1Q9Y6A2 500 aa11.96□□□□□ -0.49
VPS26B-203ENST00000525918 MYO15AQ9UKN7 3530 aa11.96□□□□□ -0.5
VPS26B-203ENST00000525918 MTCL1Q9Y4B5 1905 aaKnown RBP11.96□□□□□ -0.5
VPS26B-203ENST00000525918 CNTNAP2Q9UHC6 1331 aa11.95□□□□□ -0.5
VPS26B-203ENST00000525918 SPDYE4A6NLX3 237 aa11.95□□□□□ -0.5
VPS26B-203ENST00000525918 PROB1E7EW31 1015 aa11.95□□□□□ -0.5
VPS26B-203ENST00000525918 ASAP2O43150 1006 aa11.95□□□□□ -0.5
VPS26B-203ENST00000525918 SLC37A4O43826 429 aa11.95□□□□□ -0.5
VPS26B-203ENST00000525918 DDHD2O94830 711 aa11.95□□□□□ -0.5
VPS26B-203ENST00000525918 SRGAP2CP0DJJ0 459 aa11.95□□□□□ -0.5
VPS26B-203ENST00000525918 KLRC2P26717 231 aa11.95□□□□□ -0.5
VPS26B-203ENST00000525918 CLCN4P51793 760 aa11.95□□□□□ -0.5
VPS26B-203ENST00000525918 NPEPPSP55786 919 aa11.95□□□□□ -0.5
VPS26B-203ENST00000525918 LETM2Q2VYF4 491 aa11.95□□□□□ -0.5
VPS26B-203ENST00000525918 ASTLQ6HA08 431 aaPredicted RBP11.95□□□□□ -0.5
VPS26B-203ENST00000525918 PPP4R3AQ6IN85 833 aa11.95□□□□□ -0.5
VPS26B-203ENST00000525918 GPR149Q86SP6 731 aa11.95□□□□□ -0.5
VPS26B-203ENST00000525918 TMEM105Q8N8V8 129 aa11.95□□□□□ -0.5
VPS26B-203ENST00000525918 PSPC1Q8WXF1 523 aaKnown RBP11.95□□□□□ -0.5
VPS26B-203ENST00000525918 CEP170P1Q96L14 293 aa11.95□□□□□ -0.5
VPS26B-203ENST00000525918 AIFM3Q96NN9 605 aa11.95□□□□□ -0.5
VPS26B-203ENST00000525918 KLHL5Q96PQ7 755 aa11.95□□□□□ -0.5
VPS26B-203ENST00000525918 TMEM175Q9BSA9 504 aa11.95□□□□□ -0.5
VPS26B-203ENST00000525918 VN1R3Q9BXE9 311 aa11.95□□□□□ -0.5
VPS26B-203ENST00000525918 MFSD1Q9H3U5 465 aa11.95□□□□□ -0.5
VPS26B-203ENST00000525918 SMOC2Q9H3U7 446 aa11.95□□□□□ -0.5
VPS26B-203ENST00000525918 DHX33Q9H6R0 707 aaKnown RBP11.95□□□□□ -0.5
VPS26B-203ENST00000525918 RSAD1Q9HA92 442 aa11.95□□□□□ -0.5
VPS26B-203ENST00000525918 KCNMB3Q9NPA1 279 aa11.95□□□□□ -0.5
VPS26B-203ENST00000525918 VAV3Q9UKW4 847 aa11.95□□□□□ -0.5
VPS26B-203ENST00000525918 CCDC194A0A1B0GVG4 234 aa11.94□□□□□ -0.5
VPS26B-203ENST00000525918 NRP1O14786 923 aa11.94□□□□□ -0.5
VPS26B-203ENST00000525918 TBX3O15119 743 aa11.94□□□□□ -0.5
VPS26B-203ENST00000525918 GAS2O43903 313 aaKnown RBP11.94□□□□□ -0.5
VPS26B-203ENST00000525918 B4GALT3O60512 393 aa11.94□□□□□ -0.5
VPS26B-203ENST00000525918 CNPP09543 421 aaKnown RBP11.94□□□□□ -0.5
VPS26B-203ENST00000525918 GCFC2P16383 781 aaKnown RBP11.94□□□□□ -0.5
VPS26B-203ENST00000525918 HOXA11P31270 313 aaPredicted RBP11.94□□□□□ -0.5
VPS26B-203ENST00000525918 RFC5P40937 340 aa11.94□□□□□ -0.5
VPS26B-203ENST00000525918 CLCN5P51795 746 aa11.94□□□□□ -0.5
VPS26B-203ENST00000525918 LAMTOR4Q0VGL1 99 aa11.94□□□□□ -0.5
VPS26B-203ENST00000525918 STK3Q13188 491 aa11.94□□□□□ -0.5
VPS26B-203ENST00000525918 PCBP1Q15365 356 aaKnown RBP eCLIP11.94□□□□□ -0.5
VPS26B-203ENST00000525918 C15orf39Q6ZRI6 1047 aa11.94□□□□□ -0.5
VPS26B-203ENST00000525918 CCDC149Q6ZUS6 474 aa11.94□□□□□ -0.5
VPS26B-203ENST00000525918 OTUD6AQ7L8S5 288 aa11.94□□□□□ -0.5
VPS26B-203ENST00000525918 OTOP3Q7RTS5 596 aa11.94□□□□□ -0.5
VPS26B-203ENST00000525918 NEK8Q86SG6 692 aa11.94□□□□□ -0.5
VPS26B-203ENST00000525918 C4orf19Q8IY42 314 aa11.94□□□□□ -0.5
VPS26B-203ENST00000525918 ZNF579Q8NAF0 562 aaKnown RBP11.94□□□□□ -0.5
VPS26B-203ENST00000525918 CNNM3Q8NE01 707 aa11.94□□□□□ -0.5
VPS26B-203ENST00000525918 TCP11Q8WWU5 503 aa11.94□□□□□ -0.5
VPS26B-203ENST00000525918 TMEM143Q96AN5 459 aa11.94□□□□□ -0.5
VPS26B-203ENST00000525918 LARP6Q9BRS8 491 aaKnown RBP11.94□□□□□ -0.5
VPS26B-203ENST00000525918 TM6SF1Q9BZW5 370 aa11.94□□□□□ -0.5
VPS26B-203ENST00000525918 MINDY3Q9H8M7 445 aa11.94□□□□□ -0.5
VPS26B-203ENST00000525918 UBN1Q9NPG3 1134 aa11.94□□□□□ -0.5
VPS26B-203ENST00000525918 MRPL17Q9NRX2 175 aaKnown RBP11.94□□□□□ -0.5
VPS26B-203ENST00000525918 KCNJ14Q9UNX9 436 aa11.94□□□□□ -0.5
VPS26B-203ENST00000525918 SSX2IPQ9Y2D8 614 aa11.94□□□□□ -0.5
VPS26B-203ENST00000525918 CACNA1HO95180 2353 aa11.93□□□□□ -0.5
VPS26B-203ENST00000525918 MARCH6O60337 910 aa11.93□□□□□ -0.5
VPS26B-203ENST00000525918 CCNT1O60563 726 aaKnown RBP11.93□□□□□ -0.5
VPS26B-203ENST00000525918 LILRB3O75022 631 aa11.93□□□□□ -0.5
VPS26B-203ENST00000525918 CDKL5O76039 1030 aa11.93□□□□□ -0.5
VPS26B-203ENST00000525918 POMCP01189 267 aa11.93□□□□□ -0.5
VPS26B-203ENST00000525918 SSBP05455 408 aaKnown RBP eCLIP11.93□□□□□ -0.5
VPS26B-203ENST00000525918 XBP1P17861 261 aa11.93□□□□□ -0.5
VPS26B-203ENST00000525918 NCLP19338 710 aaKnown RBP11.93□□□□□ -0.5
VPS26B-203ENST00000525918 YWHABP31946 246 aaKnown RBP11.93□□□□□ -0.5
VPS26B-203ENST00000525918 AFF1P51825 1210 aaKnown RBP11.93□□□□□ -0.5
VPS26B-203ENST00000525918 EPHA7Q15375 998 aa11.93□□□□□ -0.5
VPS26B-203ENST00000525918 UBXN11Q5T124 520 aa11.93□□□□□ -0.5
VPS26B-203ENST00000525918 FERMT3Q86UX7 667 aa11.93□□□□□ -0.5
VPS26B-203ENST00000525918 RNF149Q8NC42 400 aa11.93□□□□□ -0.5
VPS26B-203ENST00000525918 NAP1L4Q99733 375 aaKnown RBP11.93□□□□□ -0.5
VPS26B-203ENST00000525918 PHF20Q9BVI0 1012 aa11.93□□□□□ -0.5
VPS26B-203ENST00000525918 WRAP73Q9P2S5 460 aaPredicted RBP11.93□□□□□ -0.5
VPS26B-203ENST00000525918 DPP7Q9UHL4 492 aa11.93□□□□□ -0.5
VPS26B-203ENST00000525918 CFAP54Q96N23 3096 aa11.93□□□□□ -0.5
VPS26B-203ENST00000525918 ERLIN2O94905 339 aa11.92□□□□□ -0.5
VPS26B-203ENST00000525918 SOD2P04179 222 aa11.92□□□□□ -0.5
VPS26B-203ENST00000525918 URODP06132 367 aa11.92□□□□□ -0.5
VPS26B-203ENST00000525918 ITGA4P13612 1032 aa11.92□□□□□ -0.5
VPS26B-203ENST00000525918 AXLP30530 894 aa11.92□□□□□ -0.5
VPS26B-203ENST00000525918 NBL1P41271 181 aa11.92□□□□□ -0.5
VPS26B-203ENST00000525918 NCBP1Q09161 790 aaKnown RBP11.92□□□□□ -0.5
VPS26B-203ENST00000525918 TDGQ13569 410 aa11.92□□□□□ -0.5
VPS26B-203ENST00000525918 MXD4Q14582 209 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 143.9 ms