RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 MTMR8Q96EF0 704 aa12.1□□□□□ -0.47
PCDHGB4-201ENST00000519479 DNAJC17Q9NVM6 304 aaKnown RBP12.1□□□□□ -0.47
PCDHGB4-201ENST00000519479 GOLGA8SH3BPF8 625 aa12.1□□□□□ -0.47
PCDHGB4-201ENST00000519479 MYO1CO00159 1063 aa12.1□□□□□ -0.47
PCDHGB4-201ENST00000519479 PODXLO00592 558 aa12.1□□□□□ -0.47
PCDHGB4-201ENST00000519479 PLS3P13797 630 aa12.1□□□□□ -0.47
PCDHGB4-201ENST00000519479 MARK3P27448 753 aa12.1□□□□□ -0.47
PCDHGB4-201ENST00000519479 CXCL9Q07325 125 aa12.1□□□□□ -0.47
PCDHGB4-201ENST00000519479 SLMAPQ14BN4 828 aa12.1□□□□□ -0.47
PCDHGB4-201ENST00000519479 STXBP2Q15833 593 aa12.1□□□□□ -0.47
PCDHGB4-201ENST00000519479 C9orf131Q5VYM1 1079 aa12.1□□□□□ -0.47
PCDHGB4-201ENST00000519479 SLFN12LQ6IEE8 588 aa12.1□□□□□ -0.47
PCDHGB4-201ENST00000519479 BBOF1Q8ND07 529 aa12.1□□□□□ -0.47
PCDHGB4-201ENST00000519479 UPF1Q92900 1129 aaKnown RBP eCLIP12.1□□□□□ -0.47
PCDHGB4-201ENST00000519479 TMX2Q9Y320 296 aa12.1□□□□□ -0.47
PCDHGB4-201ENST00000519479 SPDYE2BA6NHP3 402 aa12.09□□□□□ -0.47
PCDHGB4-201ENST00000519479 RAD51CO43502 376 aa12.09□□□□□ -0.47
PCDHGB4-201ENST00000519479 SPDYE6P0CI01 402 aa12.09□□□□□ -0.47
PCDHGB4-201ENST00000519479 DACT2Q5SW24 774 aa12.09□□□□□ -0.47
PCDHGB4-201ENST00000519479 PLA2G4FQ68DD2 849 aa12.09□□□□□ -0.47
PCDHGB4-201ENST00000519479 CYP4F22Q6NT55 531 aa12.09□□□□□ -0.47
PCDHGB4-201ENST00000519479 CYFIP1Q7L576 1253 aa12.09□□□□□ -0.47
PCDHGB4-201ENST00000519479 PASD1Q8IV76 773 aa12.09□□□□□ -0.47
PCDHGB4-201ENST00000519479 SH2D3CQ8N5H7 860 aa12.09□□□□□ -0.47
PCDHGB4-201ENST00000519479 IDI2Q9BXS1 227 aa12.09□□□□□ -0.47
PCDHGB4-201ENST00000519479 ADARB2Q9NS39 739 aaKnown RBP12.09□□□□□ -0.47
PCDHGB4-201ENST00000519479 HOXC10Q9NYD6 342 aa12.09□□□□□ -0.47
PCDHGB4-201ENST00000519479 ADAM22Q9P0K1 906 aa12.09□□□□□ -0.47
PCDHGB4-201ENST00000519479 ANAPC5Q9UJX4 755 aa12.09□□□□□ -0.47
PCDHGB4-201ENST00000519479 SIK3Q9Y2K2 1263 aa12.09□□□□□ -0.47
PCDHGB4-201ENST00000519479 PCDHAC2Q9Y5I4 1007 aa12.09□□□□□ -0.47
PCDHGB4-201ENST00000519479 DOT1LQ8TEK3 1739 aa12.09□□□□□ -0.47
PCDHGB4-201ENST00000519479 H3BQF6 201 aa12.09□□□□□ -0.47
PCDHGB4-201ENST00000519479 RASGRF2O14827 1237 aa12.09□□□□□ -0.47
PCDHGB4-201ENST00000519479 PRLRP16471 622 aa12.09□□□□□ -0.47
PCDHGB4-201ENST00000519479 NPEPPSP55786 919 aa12.09□□□□□ -0.47
PCDHGB4-201ENST00000519479 SARNPP82979 210 aaKnown RBP12.09□□□□□ -0.47
PCDHGB4-201ENST00000519479 USP38Q8NB14 1042 aa12.09□□□□□ -0.47
PCDHGB4-201ENST00000519479 FBXL5Q9UKA1 691 aa12.09□□□□□ -0.47
PCDHGB4-201ENST00000519479 RAB21Q9UL25 225 aa12.09□□□□□ -0.47
PCDHGB4-201ENST00000519479 EPHB6O15197 1021 aa12.09□□□□□ -0.47
PCDHGB4-201ENST00000519479 TTI1O43156 1089 aa12.09□□□□□ -0.47
PCDHGB4-201ENST00000519479 ZNF394Q53GI3 561 aa12.09□□□□□ -0.47
PCDHGB4-201ENST00000519479 DNAJC24Q6P3W2 148 aa12.09□□□□□ -0.47
PCDHGB4-201ENST00000519479 TMEM270Q6UE05 265 aa12.09□□□□□ -0.47
PCDHGB4-201ENST00000519479 RBM46Q8TBY0 533 aaKnown RBP12.09□□□□□ -0.47
PCDHGB4-201ENST00000519479 KIAA1586Q9HCI6 787 aa12.09□□□□□ -0.47
PCDHGB4-201ENST00000519479 RNF8O76064 485 aa12.08□□□□□ -0.48
PCDHGB4-201ENST00000519479 ZRANB2O95218 330 aaKnown RBP eCLIP12.08□□□□□ -0.48
PCDHGB4-201ENST00000519479 KRT14P02533 472 aa12.08□□□□□ -0.48
PCDHGB4-201ENST00000519479 CAP2P40123 477 aa12.08□□□□□ -0.48
PCDHGB4-201ENST00000519479 LMBRD2Q68DH5 695 aaPredicted RBP12.08□□□□□ -0.48
PCDHGB4-201ENST00000519479 FBF1Q8TES7 1133 aa12.08□□□□□ -0.48
PCDHGB4-201ENST00000519479 ZNF526Q8TF50 670 aaPredicted RBP12.08□□□□□ -0.48
PCDHGB4-201ENST00000519479 HEMGNQ9BXL5 484 aa12.08□□□□□ -0.48
PCDHGB4-201ENST00000519479 POLR3FQ9H1D9 316 aaPredicted RBP12.08□□□□□ -0.48
PCDHGB4-201ENST00000519479 PFASO15067 1338 aa12.08□□□□□ -0.48
PCDHGB4-201ENST00000519479 ACSL3O95573 720 aa12.08□□□□□ -0.48
PCDHGB4-201ENST00000519479 ADCY1Q08828 1119 aa12.08□□□□□ -0.48
PCDHGB4-201ENST00000519479 TFDP1Q14186 410 aa12.08□□□□□ -0.48
PCDHGB4-201ENST00000519479 SNRNP35Q16560 246 aaKnown RBP12.08□□□□□ -0.48
PCDHGB4-201ENST00000519479 SCYL2Q6P3W7 929 aa12.08□□□□□ -0.48
PCDHGB4-201ENST00000519479 DNAAF5Q86Y56 855 aa12.08□□□□□ -0.48
PCDHGB4-201ENST00000519479 EFCAB13Q8IY85 973 aa12.08□□□□□ -0.48
PCDHGB4-201ENST00000519479 C11orf70Q9BRQ4 267 aa12.08□□□□□ -0.48
PCDHGB4-201ENST00000519479 FAM198AQ9UFP1 575 aa12.08□□□□□ -0.48
PCDHGB4-201ENST00000519479 ROBO3Q96MS0 1386 aa12.08□□□□□ -0.48
PCDHGB4-201ENST00000519479 CLDN3O15551 220 aa12.08□□□□□ -0.48
PCDHGB4-201ENST00000519479 NR3C2P08235 984 aa12.08□□□□□ -0.48
PCDHGB4-201ENST00000519479 RPS6P62753 249 aaKnown RBP12.08□□□□□ -0.48
PCDHGB4-201ENST00000519479 LMNB2Q03252 620 aa12.08□□□□□ -0.48
PCDHGB4-201ENST00000519479 SCARA5Q6ZMJ2 495 aa12.08□□□□□ -0.48
PCDHGB4-201ENST00000519479 LRRC55Q6ZSA7 311 aa12.08□□□□□ -0.48
PCDHGB4-201ENST00000519479 ZNF571Q7Z3V5 609 aaPredicted RBP12.08□□□□□ -0.48
PCDHGB4-201ENST00000519479 SLC51AQ86UW1 340 aa12.08□□□□□ -0.48
PCDHGB4-201ENST00000519479 VSIG1Q86XK7 387 aa12.08□□□□□ -0.48
PCDHGB4-201ENST00000519479 DNAJC19Q96DA6 116 aa12.08□□□□□ -0.48
PCDHGB4-201ENST00000519479 ATP6V1G3Q96LB4 118 aa12.08□□□□□ -0.48
PCDHGB4-201ENST00000519479 FHDC1Q9C0D6 1143 aaPredicted RBP12.08□□□□□ -0.48
PCDHGB4-201ENST00000519479 KRT1P04264 644 aa12.08□□□□□ -0.48
PCDHGB4-201ENST00000519479 DDX42Q86XP3 938 aaKnown RBP eCLIP12.08□□□□□ -0.48
PCDHGB4-201ENST00000519479 ACAD9Q9H845 621 aa12.08□□□□□ -0.48
PCDHGB4-201ENST00000519479 LDHAP00338 332 aaKnown RBP12.07□□□□□ -0.48
PCDHGB4-201ENST00000519479 YARSP54577 528 aaKnown RBP12.07□□□□□ -0.48
PCDHGB4-201ENST00000519479 MAGOHP61326 146 aaKnown RBP12.07□□□□□ -0.48
PCDHGB4-201ENST00000519479 FKBP1CQ5VVH2 108 aa12.07□□□□□ -0.48
PCDHGB4-201ENST00000519479 THNSL1Q8IYQ7 743 aa12.07□□□□□ -0.48
PCDHGB4-201ENST00000519479 GPC2Q8N158 579 aa12.07□□□□□ -0.48
PCDHGB4-201ENST00000519479 GPD1LQ8N335 351 aa12.07□□□□□ -0.48
PCDHGB4-201ENST00000519479 ANKRD36BP1Q96IX9 119 aa12.07□□□□□ -0.48
PCDHGB4-201ENST00000519479 NLRP4Q96MN2 994 aa12.07□□□□□ -0.48
PCDHGB4-201ENST00000519479 TRIM7Q9C029 511 aa12.07□□□□□ -0.48
PCDHGB4-201ENST00000519479 JPH1Q9HDC5 661 aaPredicted RBP12.07□□□□□ -0.48
PCDHGB4-201ENST00000519479 TXNDC16Q9P2K2 825 aa12.07□□□□□ -0.48
PCDHGB4-201ENST00000519479 UBE4BO95155 1302 aa12.07□□□□□ -0.48
PCDHGB4-201ENST00000519479 LRRD1A4D1F6 860 aa12.07□□□□□ -0.48
PCDHGB4-201ENST00000519479 RCCD1A6NED2 376 aa12.07□□□□□ -0.48
PCDHGB4-201ENST00000519479 POC1B-GALNT4F8VUJ3 575 aa12.07□□□□□ -0.48
PCDHGB4-201ENST00000519479 SGK1O00141 431 aa12.07□□□□□ -0.48
PCDHGB4-201ENST00000519479 RTN2O75298 545 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms