RNA–Protein interactions for RNA: ENST00000496230.5

HCN3-204, Transcript of hyperpolarization activated cyclic nucleotide gated potassium channel 3, humanhuman

TSL 2

Gene HCN3, Length 3,245 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3-204ENST00000496230 TBX20Q9UMR3 447 aa12.96□□□□□ -0.33
HCN3-204ENST00000496230 DOCK5Q9H7D0 1870 aa12.96□□□□□ -0.34
HCN3-204ENST00000496230 PFASO15067 1338 aa12.96□□□□□ -0.34
HCN3-204ENST00000496230 GREB1LQ9C091 1923 aaPredicted RBP12.96□□□□□ -0.34
HCN3-204ENST00000496230 KCNA2P16389 499 aa12.96□□□□□ -0.34
HCN3-204ENST00000496230 SSR1P43307 286 aaKnown RBP12.96□□□□□ -0.34
HCN3-204ENST00000496230 LIG4P49917 911 aa12.96□□□□□ -0.34
HCN3-204ENST00000496230 MXI1P50539 228 aa12.96□□□□□ -0.34
HCN3-204ENST00000496230 GUCY2DQ02846 1103 aa12.96□□□□□ -0.34
HCN3-204ENST00000496230 MAPK8IP2Q13387 824 aaPredicted RBP12.96□□□□□ -0.34
HCN3-204ENST00000496230 STXBP2Q15833 593 aa12.96□□□□□ -0.34
HCN3-204ENST00000496230 EHBP1Q8NDI1 1231 aa12.96□□□□□ -0.34
HCN3-204ENST00000496230 LNX1Q8TBB1 728 aaPredicted RBP12.96□□□□□ -0.34
HCN3-204ENST00000496230 SGIP1Q9BQI5 828 aa12.96□□□□□ -0.34
HCN3-204ENST00000496230 GRID2IPA4D2P6 1211 aa12.95□□□□□ -0.34
HCN3-204ENST00000496230 F8VZ95 297 aa12.95□□□□□ -0.34
HCN3-204ENST00000496230 NOP56O00567 594 aaKnown RBP12.95□□□□□ -0.34
HCN3-204ENST00000496230 HLTFQ14527 1009 aaKnown RBP eCLIP12.95□□□□□ -0.34
HCN3-204ENST00000496230 MESDQ14696 234 aa12.95□□□□□ -0.34
HCN3-204ENST00000496230 SND1Q7KZF4 910 aaKnown RBP eCLIP12.95□□□□□ -0.34
HCN3-204ENST00000496230 PEX26Q7Z412 305 aa12.95□□□□□ -0.34
HCN3-204ENST00000496230 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.95□□□□□ -0.343e-6■■■■□ 21.3
HCN3-204ENST00000496230 TAF4BQ92750 862 aa12.95□□□□□ -0.34
HCN3-204ENST00000496230 TMEM117Q9H0C3 514 aa12.95□□□□□ -0.34
HCN3-204ENST00000496230 ASCC2Q9H1I8 757 aaPredicted RBP12.95□□□□□ -0.34
HCN3-204ENST00000496230 HTTP42858 3142 aa12.95□□□□□ -0.34
HCN3-204ENST00000496230 ITGA4P13612 1032 aa12.95□□□□□ -0.34
HCN3-204ENST00000496230 ORC1Q13415 861 aa12.95□□□□□ -0.34
HCN3-204ENST00000496230 UPF1Q92900 1129 aaKnown RBP eCLIP12.95□□□□□ -0.34
HCN3-204ENST00000496230 FAM118BQ9BPY3 351 aa12.95□□□□□ -0.34
HCN3-204ENST00000496230 DDX47Q9H0S4 455 aaKnown RBP12.95□□□□□ -0.34
HCN3-204ENST00000496230 CYP26B1Q9NR63 512 aa12.95□□□□□ -0.34
HCN3-204ENST00000496230 CTTNBP2NLQ9P2B4 639 aa12.95□□□□□ -0.34
HCN3-204ENST00000496230 ARIH2O95376 493 aa12.94□□□□□ -0.34
HCN3-204ENST00000496230 PSAPP07602 524 aa12.94□□□□□ -0.34
HCN3-204ENST00000496230 H2AFZP0C0S5 128 aa12.94□□□□□ -0.34
HCN3-204ENST00000496230 CD58P19256 250 aa12.94□□□□□ -0.34
HCN3-204ENST00000496230 GUCY2CP25092 1073 aa12.94□□□□□ -0.34
HCN3-204ENST00000496230 KRT76Q01546 638 aa12.94□□□□□ -0.34
HCN3-204ENST00000496230 SF3A3Q12874 501 aaKnown RBP eCLIP12.94□□□□□ -0.34
HCN3-204ENST00000496230 ZFYVE27Q5T4F4 411 aa12.94□□□□□ -0.34
HCN3-204ENST00000496230 H2AFVQ71UI9 128 aa12.94□□□□□ -0.34
HCN3-204ENST00000496230 OTUD6AQ7L8S5 288 aa12.94□□□□□ -0.34
HCN3-204ENST00000496230 RPUSD2Q8IZ73 545 aaKnown RBP12.94□□□□□ -0.34
HCN3-204ENST00000496230 TMEM161BQ8NDZ6 487 aa12.94□□□□□ -0.34
HCN3-204ENST00000496230 SLC35G2Q8TBE7 412 aa12.94□□□□□ -0.34
HCN3-204ENST00000496230 OPTNQ96CV9 577 aa12.94□□□□□ -0.34
HCN3-204ENST00000496230 TSGA10Q9BZW7 698 aa12.94□□□□□ -0.34
HCN3-204ENST00000496230 PORCNQ9H237 461 aa12.94□□□□□ -0.34
HCN3-204ENST00000496230 EPB41L5Q9HCM4 733 aa12.94□□□□□ -0.34
HCN3-204ENST00000496230 XPNPEP1Q9NQW7 623 aa12.94□□□□□ -0.34
HCN3-204ENST00000496230 ZNF302Q9NR11 478 aa12.94□□□□□ -0.34
HCN3-204ENST00000496230 ODF2LQ9ULJ1 636 aa12.94□□□□□ -0.34
HCN3-204ENST00000496230 GJB6O95452 261 aa12.94□□□□□ -0.34
HCN3-204ENST00000496230 FTLP02792 175 aaPredicted RBP12.94□□□□□ -0.34
HCN3-204ENST00000496230 ATP4AP20648 1035 aa12.94□□□□□ -0.34
HCN3-204ENST00000496230 SOX5P35711 763 aa12.94□□□□□ -0.34
HCN3-204ENST00000496230 TMEM62Q0P6H9 643 aa12.94□□□□□ -0.34
HCN3-204ENST00000496230 CASP8Q14790 479 aa12.94□□□□□ -0.34
HCN3-204ENST00000496230 RPS6KA1Q15418 735 aa12.94□□□□□ -0.34
HCN3-204ENST00000496230 GNPTABQ3T906 1256 aa12.94□□□□□ -0.34
HCN3-204ENST00000496230 PAPD7Q5XG87 772 aaKnown RBP12.94□□□□□ -0.34
HCN3-204ENST00000496230 B3GNT9Q6UX72 402 aa12.94□□□□□ -0.34
HCN3-204ENST00000496230 VPS36Q86VN1 386 aa12.94□□□□□ -0.34
HCN3-204ENST00000496230 THNSL1Q8IYQ7 743 aa12.94□□□□□ -0.34
HCN3-204ENST00000496230 CELF4Q9BZC1 486 aaKnown RBP12.94□□□□□ -0.34
HCN3-204ENST00000496230 APEX2Q9UBZ4 518 aa12.94□□□□□ -0.34
HCN3-204ENST00000496230 FBXO40Q9UH90 709 aa12.94□□□□□ -0.34
HCN3-204ENST00000496230 ZRANB2O95218 330 aaKnown RBP eCLIP12.94□□□□□ -0.34
HCN3-204ENST00000496230 MMEP08473 750 aa12.94□□□□□ -0.34
HCN3-204ENST00000496230 TCF7P36402 384 aaPredicted RBP12.94□□□□□ -0.34
HCN3-204ENST00000496230 IRX5P78411 483 aaPredicted RBP12.94□□□□□ -0.34
HCN3-204ENST00000496230 BEND6Q5SZJ8 279 aaPredicted RBP12.94□□□□□ -0.34
HCN3-204ENST00000496230 C8orf74Q6P047 294 aa12.94□□□□□ -0.34
HCN3-204ENST00000496230 SCARA5Q6ZMJ2 495 aa12.94□□□□□ -0.34
HCN3-204ENST00000496230 HOMEZQ8IX15 550 aa12.94□□□□□ -0.34
HCN3-204ENST00000496230 DEPTORQ8TB45 409 aa12.94□□□□□ -0.34
HCN3-204ENST00000496230 ATP6V0A1Q93050 837 aa12.94□□□□□ -0.34
HCN3-204ENST00000496230 SPATC1LQ9H0A9 340 aa12.94□□□□□ -0.34
HCN3-204ENST00000496230 NFU1Q9UMS0 254 aa12.94□□□□□ -0.34
HCN3-204ENST00000496230 TRPC6Q9Y210 931 aa12.94□□□□□ -0.34
HCN3-204ENST00000496230 K7ERI5 159 aa12.93□□□□□ -0.34
HCN3-204ENST00000496230 UBA1P22314 1058 aaKnown RBP12.93□□□□□ -0.34
HCN3-204ENST00000496230 HNRNPH3P31942 346 aaKnown RBP12.93□□□□□ -0.34
HCN3-204ENST00000496230 NLRP11P59045 1033 aaKnown RBP12.93□□□□□ -0.34
HCN3-204ENST00000496230 NAB2Q15742 525 aa12.93□□□□□ -0.34
HCN3-204ENST00000496230 KCTD16Q68DU8 428 aa12.93□□□□□ -0.34
HCN3-204ENST00000496230 RHPN2Q8IUC4 686 aa12.93□□□□□ -0.34
HCN3-204ENST00000496230 REPS2Q8NFH8 660 aa12.93□□□□□ -0.34
HCN3-204ENST00000496230 ASAP3Q8TDY4 903 aa12.93□□□□□ -0.34
HCN3-204ENST00000496230 CPA5Q8WXQ8 436 aa12.93□□□□□ -0.34
HCN3-204ENST00000496230 BORCS6Q96GS4 357 aa12.93□□□□□ -0.34
HCN3-204ENST00000496230 IFT74Q96LB3 600 aa12.93□□□□□ -0.34
HCN3-204ENST00000496230 DPH5Q9H2P9 285 aa12.93□□□□□ -0.34
HCN3-204ENST00000496230 AIPL1Q9NZN9 384 aa12.93□□□□□ -0.34
HCN3-204ENST00000496230 NR2E1Q9Y466 385 aa12.93□□□□□ -0.34
HCN3-204ENST00000496230 RPTORQ8N122 1335 aa12.93□□□□□ -0.34
HCN3-204ENST00000496230 SOWAHBA6NEL2 793 aa12.93□□□□□ -0.34
HCN3-204ENST00000496230 PLA2G6O60733 806 aa12.93□□□□□ -0.34
HCN3-204ENST00000496230 GLI1P08151 1106 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms