RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 ZSCAN20P17040 1043 aaPredicted RBP21.33■■□□□ 1.01
PCOLCE-208ENST00000487172 HOXA11P31270 313 aaPredicted RBP21.33■■□□□ 1.01
PCOLCE-208ENST00000487172 TAS1R3Q7RTX0 852 aa21.33■■□□□ 1.01
PCOLCE-208ENST00000487172 RTN4RL1Q86UN2 441 aaPredicted RBP21.33■■□□□ 1.01
PCOLCE-208ENST00000487172 TRAIPQ9BWF2 469 aa21.33■■□□□ 1.01
PCOLCE-208ENST00000487172 STRA6Q9BX79 667 aa21.33■■□□□ 1.01
PCOLCE-208ENST00000487172 TSPYL2Q9H2G4 693 aaPredicted RBP21.33■■□□□ 1.01
PCOLCE-208ENST00000487172 MTIF3Q9H2K0 278 aaKnown RBP21.33■■□□□ 1.01
PCOLCE-208ENST00000487172 RGS18Q9NS28 235 aa21.33■■□□□ 1.01
PCOLCE-208ENST00000487172 MICAL3Q7RTP6 2002 aa21.33■■□□□ 1
PCOLCE-208ENST00000487172 PPP1R37O75864 691 aa21.32■■□□□ 1
PCOLCE-208ENST00000487172 RPN1P04843 607 aaKnown RBP21.32■■□□□ 1
PCOLCE-208ENST00000487172 NMT1P30419 496 aaKnown RBP21.32■■□□□ 1
PCOLCE-208ENST00000487172 PSMD2Q13200 908 aa21.32■■□□□ 1
PCOLCE-208ENST00000487172 ALCAMQ13740 583 aa21.32■■□□□ 1
PCOLCE-208ENST00000487172 SHHQ15465 462 aa21.32■■□□□ 1
PCOLCE-208ENST00000487172 PRPF38BQ5VTL8 546 aaKnown RBP21.32■■□□□ 1
PCOLCE-208ENST00000487172 HVCN1Q96D96 273 aa21.32■■□□□ 1
PCOLCE-208ENST00000487172 MRPL44Q9H9J2 332 aaKnown RBP21.32■■□□□ 1
PCOLCE-208ENST00000487172 C1orf112Q9NSG2 853 aa21.32■■□□□ 1
PCOLCE-208ENST00000487172 CNTNAP2Q9UHC6 1331 aa21.31■■□□□ 1
PCOLCE-208ENST00000487172 TNRC18O15417 2968 aaPredicted RBP21.31■■□□□ 1
PCOLCE-208ENST00000487172 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.31■■□□□ 1
PCOLCE-208ENST00000487172 K7ENM7 598 aa21.31■■□□□ 1
PCOLCE-208ENST00000487172 MGEA5O60502 916 aa21.31■■□□□ 1
PCOLCE-208ENST00000487172 ARF4P18085 180 aaPredicted RBP21.31■■□□□ 1
PCOLCE-208ENST00000487172 PNOCQ13519 176 aa21.31■■□□□ 1
PCOLCE-208ENST00000487172 PRPF4BQ13523 1007 aaKnown RBP21.31■■□□□ 1
PCOLCE-208ENST00000487172 KCNB1Q14721 858 aa21.31■■□□□ 1
PCOLCE-208ENST00000487172 KMT5BQ4FZB7 885 aa21.31■■□□□ 1
PCOLCE-208ENST00000487172 FAM26FQ5R3K3 315 aa21.31■■□□□ 1
PCOLCE-208ENST00000487172 C9orf50Q5SZB4 431 aa21.31■■□□□ 1
PCOLCE-208ENST00000487172 SPATA20Q8TB22 786 aa21.31■■□□□ 1
PCOLCE-208ENST00000487172 LINC01599Q8WXQ3 324 aa21.31■■□□□ 1
PCOLCE-208ENST00000487172 CCDC47Q96A33 483 aaKnown RBP21.31■■□□□ 1
PCOLCE-208ENST00000487172 CCDC51Q96ER9 411 aa21.31■■□□□ 1
PCOLCE-208ENST00000487172 ADAM2Q99965 735 aa21.31■■□□□ 1
PCOLCE-208ENST00000487172 TBX20Q9UMR3 447 aa21.31■■□□□ 1
PCOLCE-208ENST00000487172 PIN4Q9Y237 131 aaKnown RBP21.31■■□□□ 1
PCOLCE-208ENST00000487172 PCDHB13Q9Y5F0 798 aa21.31■■□□□ 1
PCOLCE-208ENST00000487172 A0A1B0GUA9 196 aa21.3■■□□□ 1
PCOLCE-208ENST00000487172 RBAK-RBAKDNI3L0D1 243 aa21.3■■□□□ 1
PCOLCE-208ENST00000487172 RHOBTB3O94955 611 aa21.3■■□□□ 1
PCOLCE-208ENST00000487172 WDR5P61964 334 aaKnown RBP21.3■■□□□ 1
PCOLCE-208ENST00000487172 FAM189BP81408 668 aa21.3■■□□□ 1
PCOLCE-208ENST00000487172 STRN3Q13033 797 aa21.3■■□□□ 1
PCOLCE-208ENST00000487172 NOTUMQ6P988 496 aa21.3■■□□□ 1
PCOLCE-208ENST00000487172 CHRDL2Q6WN34 429 aa21.3■■□□□ 1
PCOLCE-208ENST00000487172 SLC24A5Q71RS6 500 aa21.3■■□□□ 1
PCOLCE-208ENST00000487172 PHOSPHO2Q8TCD6 241 aa21.3■■□□□ 1
PCOLCE-208ENST00000487172 GPT2Q8TD30 523 aa21.3■■□□□ 1
PCOLCE-208ENST00000487172 MRPL4Q9BYD3 311 aaKnown RBP21.3■■□□□ 1
PCOLCE-208ENST00000487172 TBC1D7Q9P0N9 293 aa21.3■■□□□ 1
PCOLCE-208ENST00000487172 A0A1W2PPC1 479 aa21.29■■□□□ 1
PCOLCE-208ENST00000487172 C9IYK1 514 aa21.29■■□□□ 1
PCOLCE-208ENST00000487172 B4GALT5O43286 388 aa21.29■■□□□ 1
PCOLCE-208ENST00000487172 SMC2O95347 1197 aa21.29■■□□□ 1
PCOLCE-208ENST00000487172 GCNT3O95395 438 aa21.29■■□□□ 1
PCOLCE-208ENST00000487172 MBD3O95983 291 aa21.29■■□□□ 1
PCOLCE-208ENST00000487172 EDN1P05305 212 aa21.29■■□□□ 1
PCOLCE-208ENST00000487172 NT5DC1Q5TFE4 455 aa21.29■■□□□ 1
PCOLCE-208ENST00000487172 ZPBP2Q6X784 338 aa21.29■■□□□ 1
PCOLCE-208ENST00000487172 STXBP4Q6ZWJ1 553 aa21.29■■□□□ 1
PCOLCE-208ENST00000487172 MAP4K3Q8IVH8 894 aa21.29■■□□□ 1
PCOLCE-208ENST00000487172 TDHQ8IZJ6 230 aa21.29■■□□□ 1
PCOLCE-208ENST00000487172 GSDMAQ96QA5 445 aa21.29■■□□□ 1
PCOLCE-208ENST00000487172 ACO2Q99798 780 aaKnown RBP21.29■■□□□ 1
PCOLCE-208ENST00000487172 EXOC1Q9NV70 894 aa21.29■■□□□ 1
PCOLCE-208ENST00000487172 RNF216Q9NWF9 866 aaPredicted RBP21.29■■□□□ 1
PCOLCE-208ENST00000487172 CXXC1Q9P0U4 656 aaPredicted RBP21.29■■□□□ 1
PCOLCE-208ENST00000487172 N4BP3O15049 544 aa21.28■■□□□ 1
PCOLCE-208ENST00000487172 EIF3DO15371 548 aaKnown RBP eCLIP21.28■■□□□ 1
PCOLCE-208ENST00000487172 ZNF623O75123 536 aa21.28■■□□□ 1
PCOLCE-208ENST00000487172 PIGRP01833 764 aa21.28■■□□□ 1
PCOLCE-208ENST00000487172 PTMSP20962 102 aa21.28■■□□□ 1
PCOLCE-208ENST00000487172 KCNJ6P48051 423 aa21.28■■□□□ 1
PCOLCE-208ENST00000487172 SARSP49591 514 aaKnown RBP21.28■■□□□ 1
PCOLCE-208ENST00000487172 ZC2HC1CQ53FD0 456 aaPredicted RBP21.28■■□□□ 1
PCOLCE-208ENST00000487172 TWF2Q6IBS0 349 aaKnown RBP21.28■■□□□ 1
PCOLCE-208ENST00000487172 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.28■■□□□ 1
PCOLCE-208ENST00000487172 EPM2AIP1Q7L775 607 aaPredicted RBP21.28■■□□□ 1
PCOLCE-208ENST00000487172 ZNF507Q8TCN5 953 aa21.28■■□□□ 1
PCOLCE-208ENST00000487172 HPS3Q969F9 1004 aa21.28■■□□□ 1
PCOLCE-208ENST00000487172 CPB2Q96IY4 423 aa21.28■■□□□ 1
PCOLCE-208ENST00000487172 RNPC3Q96LT9 517 aaKnown RBP21.28■■□□□ 1
PCOLCE-208ENST00000487172 SLC9A7Q96T83 725 aa21.28■■□□□ 1
PCOLCE-208ENST00000487172 ELAC1Q9H777 363 aaKnown RBP21.28■■□□□ 1
PCOLCE-208ENST00000487172 TNFSF13BQ9Y275 285 aa21.28■■□□□ 1
PCOLCE-208ENST00000487172 PCDHA5Q9Y5H7 936 aa21.28■■□□□ 1
PCOLCE-208ENST00000487172 SLC4A7Q9Y6M7 1214 aa21.28■■□□□ 1
PCOLCE-208ENST00000487172 TTC3P53804 2025 aa21.28■■□□□ 1
PCOLCE-208ENST00000487172 A0A0U1RQF3 1178 aa21.27■■□□□ 1
PCOLCE-208ENST00000487172 TTLL13PA6NNM8 815 aa21.27■■□□□ 1
PCOLCE-208ENST00000487172 ZBBXA8MT70 800 aa21.27■■□□□ 1
PCOLCE-208ENST00000487172 AMHP03971 560 aa21.27■■□□□ 1
PCOLCE-208ENST00000487172 MYBP10242 640 aa21.27■■□□□ 1
PCOLCE-208ENST00000487172 SKIP12755 728 aa21.27■■□□□ 1
PCOLCE-208ENST00000487172 RAB27AP51159 221 aa21.27■■□□□ 1
PCOLCE-208ENST00000487172 CASP5P51878 434 aa21.27■■□□□ 1
PCOLCE-208ENST00000487172 UBXN11Q5T124 520 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms