RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 ADH1AP07327 375 aa17.27■□□□□ 0.36
U2AF1-211ENST00000486519 NT5C2P49902 561 aa17.27■□□□□ 0.36
U2AF1-211ENST00000486519 RNF168Q8IYW5 571 aaPredicted RBP17.27■□□□□ 0.36
U2AF1-211ENST00000486519 CMTR1Q8N1G2 835 aaKnown RBP17.27■□□□□ 0.36
U2AF1-211ENST00000486519 ITFG1Q8TB96 612 aa17.27■□□□□ 0.36
U2AF1-211ENST00000486519 PRKD2Q9BZL6 878 aa17.27■□□□□ 0.36
U2AF1-211ENST00000486519 PLA2G2FQ9BZM2 168 aa17.27■□□□□ 0.36
U2AF1-211ENST00000486519 IL25Q9H293 177 aa17.27■□□□□ 0.36
U2AF1-211ENST00000486519 RXFP1Q9HBX9 757 aa17.27■□□□□ 0.36
U2AF1-211ENST00000486519 HEBP1Q9NRV9 189 aa17.27■□□□□ 0.36
U2AF1-211ENST00000486519 CDH7Q9ULB5 785 aa17.27■□□□□ 0.36
U2AF1-211ENST00000486519 WASF3Q9UPY6 502 aa17.27■□□□□ 0.36
U2AF1-211ENST00000486519 TAF6LQ9Y6J9 622 aa17.27■□□□□ 0.36
U2AF1-211ENST00000486519 TICRRQ7Z2Z1 1910 aa17.26■□□□□ 0.35
U2AF1-211ENST00000486519 PLEKHA8P1O95397 391 aa17.26■□□□□ 0.35
U2AF1-211ENST00000486519 RPL17P18621 184 aaKnown RBP17.26■□□□□ 0.35
U2AF1-211ENST00000486519 SDSP20132 328 aa17.26■□□□□ 0.35
U2AF1-211ENST00000486519 SIM2Q14190 667 aaPredicted RBP17.26■□□□□ 0.35
U2AF1-211ENST00000486519 FAM160B1Q5W0V3 765 aa17.26■□□□□ 0.35
U2AF1-211ENST00000486519 GLB1LQ6UWU2 654 aa17.26■□□□□ 0.35
U2AF1-211ENST00000486519 RSPO2Q6UXX9 243 aaPredicted RBP17.26■□□□□ 0.35
U2AF1-211ENST00000486519 AGMOQ6ZNB7 445 aa17.26■□□□□ 0.35
U2AF1-211ENST00000486519 CKAP2LQ8IYA6 745 aa17.26■□□□□ 0.35
U2AF1-211ENST00000486519 DDX1Q92499 740 aaKnown RBP17.26■□□□□ 0.35
U2AF1-211ENST00000486519 FGF13Q92913 245 aa17.26■□□□□ 0.35
U2AF1-211ENST00000486519 PHKBQ93100 1093 aa17.26■□□□□ 0.35
U2AF1-211ENST00000486519 FAM126AQ9BYI3 521 aaPredicted RBP17.26■□□□□ 0.35
U2AF1-211ENST00000486519 PRG3Q9Y2Y8 225 aaPredicted RBP17.26■□□□□ 0.35
U2AF1-211ENST00000486519 SMG1Q96Q15 3661 aaKnown RBP17.25■□□□□ 0.35
U2AF1-211ENST00000486519 CHURC1-FNTBB4DL54 471 aa17.25■□□□□ 0.35
U2AF1-211ENST00000486519 GIPC1O14908 333 aa17.25■□□□□ 0.35
U2AF1-211ENST00000486519 DHX15O43143 795 aaKnown RBP17.25■□□□□ 0.35
U2AF1-211ENST00000486519 KCNK5O95279 499 aa17.25■□□□□ 0.35
U2AF1-211ENST00000486519 FNTBP49356 437 aa17.25■□□□□ 0.35
U2AF1-211ENST00000486519 SATB1Q01826 763 aa17.25■□□□□ 0.35
U2AF1-211ENST00000486519 IMMTQ16891 758 aaKnown RBP17.25■□□□□ 0.35
U2AF1-211ENST00000486519 LILRA6Q6PI73 481 aa17.25■□□□□ 0.35
U2AF1-211ENST00000486519 RILPL2Q969X0 211 aa17.25■□□□□ 0.35
U2AF1-211ENST00000486519 RRP36Q96EU6 259 aaKnown RBP17.25■□□□□ 0.35
U2AF1-211ENST00000486519 SPZ1Q9BXG8 430 aa17.25■□□□□ 0.35
U2AF1-211ENST00000486519 CNNM2Q9H8M5 875 aa17.25■□□□□ 0.35
U2AF1-211ENST00000486519 FAM105AQ9NUU6 356 aa17.25■□□□□ 0.35
U2AF1-211ENST00000486519 DACT1Q9NYF0 836 aa17.25■□□□□ 0.35
U2AF1-211ENST00000486519 NDRG2Q9UN36 371 aaKnown RBP17.25■□□□□ 0.35
U2AF1-211ENST00000486519 FAN1Q9Y2M0 1017 aa17.25■□□□□ 0.35
U2AF1-211ENST00000486519 LAMA1P25391 3075 aa17.25■□□□□ 0.35
U2AF1-211ENST00000486519 TDRD15B5MCY1 1934 aaKnown RBP17.25■□□□□ 0.35
U2AF1-211ENST00000486519 DMXL2Q8TDJ6 3036 aa17.25■□□□□ 0.35
U2AF1-211ENST00000486519 DSPP15924 2871 aaKnown RBP17.24■□□□□ 0.35
U2AF1-211ENST00000486519 SPDYE3A6NKU9 549 aa17.24■□□□□ 0.35
U2AF1-211ENST00000486519 IFIT3O14879 490 aaKnown RBP17.24■□□□□ 0.35
U2AF1-211ENST00000486519 GAS2O43903 313 aaKnown RBP17.24■□□□□ 0.35
U2AF1-211ENST00000486519 GLUD2P49448 558 aa17.24■□□□□ 0.35
U2AF1-211ENST00000486519 GAS6Q14393 721 aa17.24■□□□□ 0.35
U2AF1-211ENST00000486519 AASDHQ4L235 1098 aaPredicted RBP17.24■□□□□ 0.35
U2AF1-211ENST00000486519 TWF2Q6IBS0 349 aaKnown RBP17.24■□□□□ 0.35
U2AF1-211ENST00000486519 CWC27Q6UX04 472 aaKnown RBP17.24■□□□□ 0.35
U2AF1-211ENST00000486519 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.24■□□□□ 0.35
U2AF1-211ENST00000486519 SRBD1Q8N5C6 995 aaKnown RBP17.24■□□□□ 0.35
U2AF1-211ENST00000486519 FAM160A2Q8N612 972 aaPredicted RBP17.24■□□□□ 0.35
U2AF1-211ENST00000486519 CHRDQ9H2X0 955 aa17.24■□□□□ 0.35
U2AF1-211ENST00000486519 SMOC1Q9H4F8 434 aa17.24■□□□□ 0.35
U2AF1-211ENST00000486519 ZDHHC7Q9NXF8 308 aa17.24■□□□□ 0.35
U2AF1-211ENST00000486519 MAFBQ9Y5Q3 323 aaPredicted RBP17.24■□□□□ 0.35
U2AF1-211ENST00000486519 F5P12259 2224 aa17.23■□□□□ 0.35
U2AF1-211ENST00000486519 NRG2O14511 850 aaPredicted RBP17.23■□□□□ 0.35
U2AF1-211ENST00000486519 POMCP01189 267 aa17.23■□□□□ 0.35
U2AF1-211ENST00000486519 KIF5BP33176 963 aa17.23■□□□□ 0.35
U2AF1-211ENST00000486519 LIMK1P53667 647 aa17.23■□□□□ 0.35
U2AF1-211ENST00000486519 ADCY1Q08828 1119 aa17.23■□□□□ 0.35
U2AF1-211ENST00000486519 PSAPL1Q6NUJ1 521 aa17.23■□□□□ 0.35
U2AF1-211ENST00000486519 NLRP7Q8WX94 980 aa17.23■□□□□ 0.35
U2AF1-211ENST00000486519 SCLT1Q96NL6 688 aa17.23■□□□□ 0.35
U2AF1-211ENST00000486519 MAP7D2Q96T17 732 aa17.23■□□□□ 0.35
U2AF1-211ENST00000486519 TRAIPQ9BWF2 469 aa17.23■□□□□ 0.35
U2AF1-211ENST00000486519 LY9Q9HBG7 655 aa17.23■□□□□ 0.35
U2AF1-211ENST00000486519 ADAMTS20P59510 1910 aa17.22■□□□□ 0.35
U2AF1-211ENST00000486519 CYSRT1A8MQ03 144 aa17.22■□□□□ 0.35
U2AF1-211ENST00000486519 TAF4O00268 1085 aa17.22■□□□□ 0.35
U2AF1-211ENST00000486519 MEIS1O00470 390 aa17.22■□□□□ 0.35
U2AF1-211ENST00000486519 ZNF862O60290 1169 aa17.22■□□□□ 0.35
U2AF1-211ENST00000486519 ZMYND10O75800 440 aa17.22■□□□□ 0.35
U2AF1-211ENST00000486519 FOXC1Q12948 553 aa17.22■□□□□ 0.35
U2AF1-211ENST00000486519 CEP55Q53EZ4 464 aa17.22■□□□□ 0.35
U2AF1-211ENST00000486519 STPG1Q5TH74 334 aa17.22■□□□□ 0.35
U2AF1-211ENST00000486519 MIS18BP1Q6P0N0 1132 aa17.22■□□□□ 0.35
U2AF1-211ENST00000486519 GATA6Q92908 595 aa17.22■□□□□ 0.35
U2AF1-211ENST00000486519 DSCC1Q9BVC3 393 aa17.22■□□□□ 0.35
U2AF1-211ENST00000486519 PHF20Q9BVI0 1012 aa17.22■□□□□ 0.35
U2AF1-211ENST00000486519 HCFC1R1Q9NWW0 138 aa17.22■□□□□ 0.35
U2AF1-211ENST00000486519 C2orf42Q9NWW7 574 aa17.22■□□□□ 0.35
U2AF1-211ENST00000486519 PIN4Q9Y237 131 aaKnown RBP17.22■□□□□ 0.35
U2AF1-211ENST00000486519 SPAG17Q6Q759 2223 aa17.22■□□□□ 0.35
U2AF1-211ENST00000486519 PDCD11Q14690 1871 aaKnown RBP17.22■□□□□ 0.35
U2AF1-211ENST00000486519 ALDH2P05091 517 aa17.21■□□□□ 0.35
U2AF1-211ENST00000486519 ANTXR2P58335 489 aa17.21■□□□□ 0.35
U2AF1-211ENST00000486519 PFKPQ01813 784 aa17.21■□□□□ 0.35
U2AF1-211ENST00000486519 DSG1Q02413 1049 aa17.21■□□□□ 0.35
U2AF1-211ENST00000486519 ANKRD45Q5TZF3 282 aa17.21■□□□□ 0.35
U2AF1-211ENST00000486519 ZNF852Q6ZMS4 543 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms