RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 TCEA3O75764 348 aa5.65□□□□□ -1.5
VPS13A-211ENST00000484581 TUSC2O75896 110 aa5.65□□□□□ -1.5
VPS13A-211ENST00000484581 CLEC2LP0C7M8 214 aa5.65□□□□□ -1.5
VPS13A-211ENST00000484581 THBS2P35442 1172 aa5.65□□□□□ -1.5
VPS13A-211ENST00000484581 SLC16A1P53985 500 aa5.65□□□□□ -1.5
VPS13A-211ENST00000484581 AK2P54819 239 aa5.65□□□□□ -1.5
VPS13A-211ENST00000484581 FAM193AP78312 1265 aa5.65□□□□□ -1.5
VPS13A-211ENST00000484581 RAPGEF1Q13905 1077 aa5.65□□□□□ -1.5
VPS13A-211ENST00000484581 KRT72Q14CN4 511 aa5.65□□□□□ -1.5
VPS13A-211ENST00000484581 RALBP1Q15311 655 aa5.65□□□□□ -1.5
VPS13A-211ENST00000484581 MUM1Q2TAK8 710 aa5.65□□□□□ -1.5
VPS13A-211ENST00000484581 UAP1L1Q3KQV9 507 aa5.65□□□□□ -1.5
VPS13A-211ENST00000484581 INO80DQ53TQ3 878 aaPredicted RBP5.65□□□□□ -1.5
VPS13A-211ENST00000484581 PITRM1Q5JRX3 1037 aa5.65□□□□□ -1.5
VPS13A-211ENST00000484581 TTC38Q5R3I4 469 aa5.65□□□□□ -1.5
VPS13A-211ENST00000484581 USP45Q70EL2 814 aa5.65□□□□□ -1.5
VPS13A-211ENST00000484581 RTN4RL1Q86UN2 441 aaPredicted RBP5.65□□□□□ -1.5
VPS13A-211ENST00000484581 DENND1CQ8IV53 801 aa5.65□□□□□ -1.5
VPS13A-211ENST00000484581 TRIM48Q8IWZ4 208 aa5.65□□□□□ -1.5
VPS13A-211ENST00000484581 GRAMD1CQ8IYS0 662 aa5.65□□□□□ -1.5
VPS13A-211ENST00000484581 THEMISQ8N1K5 641 aaPredicted RBP5.65□□□□□ -1.5
VPS13A-211ENST00000484581 TTLL11Q8NHH1 800 aa5.65□□□□□ -1.5
VPS13A-211ENST00000484581 PNISRQ8TF01 805 aaKnown RBP5.65□□□□□ -1.5
VPS13A-211ENST00000484581 COA7Q96BR5 231 aa5.65□□□□□ -1.5
VPS13A-211ENST00000484581 SAMD11Q96NU1 681 aa5.65□□□□□ -1.5
VPS13A-211ENST00000484581 ANO3Q9BYT9 981 aa5.65□□□□□ -1.5
VPS13A-211ENST00000484581 TMEM60Q9H2L4 133 aa5.65□□□□□ -1.5
VPS13A-211ENST00000484581 PLCB1Q9NQ66 1216 aa5.65□□□□□ -1.5
VPS13A-211ENST00000484581 SERPINB13Q9UIV8 391 aa5.65□□□□□ -1.5
VPS13A-211ENST00000484581 EDARQ9UNE0 448 aa5.65□□□□□ -1.5
VPS13A-211ENST00000484581 PCDHB4Q9Y5E5 795 aa5.65□□□□□ -1.5
VPS13A-211ENST00000484581 ZNF536O15090 1300 aa5.65□□□□□ -1.51
VPS13A-211ENST00000484581 ST20-MTHFSA0A0A6YYL1 179 aa5.64□□□□□ -1.51
VPS13A-211ENST00000484581 MROH6A6NGR9 719 aa5.64□□□□□ -1.51
VPS13A-211ENST00000484581 SGSM2O43147 1006 aa5.64□□□□□ -1.51
VPS13A-211ENST00000484581 SLC5A1P13866 664 aa5.64□□□□□ -1.51
VPS13A-211ENST00000484581 PDCP20941 246 aa5.64□□□□□ -1.51
VPS13A-211ENST00000484581 TM4SF4P48230 202 aa5.64□□□□□ -1.51
VPS13A-211ENST00000484581 ANO4Q32M45 955 aa5.64□□□□□ -1.51
VPS13A-211ENST00000484581 TMEM95Q3KNT9 176 aa5.64□□□□□ -1.51
VPS13A-211ENST00000484581 TBC1D10BQ4KMP7 808 aaPredicted RBP5.64□□□□□ -1.51
VPS13A-211ENST00000484581 FAM26FQ5R3K3 315 aa5.64□□□□□ -1.51
VPS13A-211ENST00000484581 MCTP2Q6DN12 878 aa5.64□□□□□ -1.51
VPS13A-211ENST00000484581 TIGD7Q6NT04 549 aaPredicted RBP5.64□□□□□ -1.51
VPS13A-211ENST00000484581 IFNL2Q8IZJ0 200 aa5.64□□□□□ -1.51
VPS13A-211ENST00000484581 PRR18Q8N4B5 295 aa5.64□□□□□ -1.51
VPS13A-211ENST00000484581 FAM26EQ8N5C1 309 aa5.64□□□□□ -1.51
VPS13A-211ENST00000484581 FAM156AQ8NDB6 213 aa5.64□□□□□ -1.51
VPS13A-211ENST00000484581 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.64□□□□□ -1.51
VPS13A-211ENST00000484581 PARD3BQ8TEW8 1205 aa5.64□□□□□ -1.51
VPS13A-211ENST00000484581 ASB15Q8WXK1 588 aa5.64□□□□□ -1.51
VPS13A-211ENST00000484581 FOXRED1Q96CU9 486 aaPredicted RBP5.64□□□□□ -1.51
VPS13A-211ENST00000484581 KCTD10Q9H3F6 313 aa5.64□□□□□ -1.51
VPS13A-211ENST00000484581 POFUT1Q9H488 388 aa5.64□□□□□ -1.51
VPS13A-211ENST00000484581 NGRNQ9NPE2 291 aaKnown RBP5.64□□□□□ -1.51
VPS13A-211ENST00000484581 PRSS38A1L453 326 aa5.63□□□□□ -1.51
VPS13A-211ENST00000484581 DDX3XO00571 662 aaKnown RBP eCLIP5.63□□□□□ -1.51
VPS13A-211ENST00000484581 SH3BP5O60239 455 aa5.63□□□□□ -1.51
VPS13A-211ENST00000484581 PRLP01236 227 aa5.63□□□□□ -1.51
VPS13A-211ENST00000484581 LPLP06858 475 aa5.63□□□□□ -1.51
VPS13A-211ENST00000484581 MMEP08473 750 aa5.63□□□□□ -1.51
VPS13A-211ENST00000484581 MYBP10242 640 aa5.63□□□□□ -1.51
VPS13A-211ENST00000484581 ALDH5A1P51649 535 aaPredicted RBP5.63□□□□□ -1.51
VPS13A-211ENST00000484581 ZXDAP98168 799 aa5.63□□□□□ -1.51
VPS13A-211ENST00000484581 LONRF1Q17RB8 773 aa5.63□□□□□ -1.51
VPS13A-211ENST00000484581 GLB1LQ6UWU2 654 aa5.63□□□□□ -1.51
VPS13A-211ENST00000484581 CCDC149Q6ZUS6 474 aa5.63□□□□□ -1.51
VPS13A-211ENST00000484581 MILR1Q7Z6M3 343 aa5.63□□□□□ -1.51
VPS13A-211ENST00000484581 STK32CQ86UX6 486 aa5.63□□□□□ -1.51
VPS13A-211ENST00000484581 RBM12BQ8IXT5 1001 aaKnown RBP5.63□□□□□ -1.51
VPS13A-211ENST00000484581 FAM186BQ8IYM0 893 aa5.63□□□□□ -1.51
VPS13A-211ENST00000484581 CAMKK1Q8N5S9 505 aa5.63□□□□□ -1.51
VPS13A-211ENST00000484581 TTC9BQ8N6N2 239 aa5.63□□□□□ -1.51
VPS13A-211ENST00000484581 PPP1R35Q8TAP8 253 aa5.63□□□□□ -1.51
VPS13A-211ENST00000484581 C8orf49Q96NF6 230 aa5.63□□□□□ -1.51
VPS13A-211ENST00000484581 GBP4Q96PP9 640 aa5.63□□□□□ -1.51
VPS13A-211ENST00000484581 SLC2A13Q96QE2 648 aa5.63□□□□□ -1.51
VPS13A-211ENST00000484581 MYD88Q99836 296 aa5.63□□□□□ -1.51
VPS13A-211ENST00000484581 SYT3Q9BQG1 590 aa5.63□□□□□ -1.51
VPS13A-211ENST00000484581 NAA15Q9BXJ9 866 aaKnown RBP5.63□□□□□ -1.51
VPS13A-211ENST00000484581 PPCSQ9HAB8 311 aa5.63□□□□□ -1.51
VPS13A-211ENST00000484581 IFT122Q9HBG6 1241 aa5.63□□□□□ -1.51
VPS13A-211ENST00000484581 NUMBLQ9Y6R0 609 aa5.63□□□□□ -1.51
VPS13A-211ENST00000484581 TCRBV5S2A0A599 114 aa5.62□□□□□ -1.51
VPS13A-211ENST00000484581 KLRG2A4D1S0 409 aaPredicted RBP5.62□□□□□ -1.51
VPS13A-211ENST00000484581 GOLGA6L22H0YM25 854 aa5.62□□□□□ -1.51
VPS13A-211ENST00000484581 ACOT7O00154 380 aa5.62□□□□□ -1.51
VPS13A-211ENST00000484581 B3GALT2O43825 422 aa5.62□□□□□ -1.51
VPS13A-211ENST00000484581 UBXN7O94888 489 aa5.62□□□□□ -1.51
VPS13A-211ENST00000484581 PRPF6O94906 941 aaKnown RBP5.62□□□□□ -1.51
VPS13A-211ENST00000484581 FGAP02671 866 aa5.62□□□□□ -1.51
VPS13A-211ENST00000484581 MYL3P08590 195 aa5.62□□□□□ -1.51
VPS13A-211ENST00000484581 AOAHP28039 575 aa5.62□□□□□ -1.51
VPS13A-211ENST00000484581 IL12RB1P42701 662 aa5.62□□□□□ -1.51
VPS13A-211ENST00000484581 FXR1P51114 621 aaKnown RBP eCLIP5.62□□□□□ -1.51
VPS13A-211ENST00000484581 KRTAP1-1Q07627 177 aa5.62□□□□□ -1.51
VPS13A-211ENST00000484581 SEMA5AQ13591 1074 aa5.62□□□□□ -1.51
VPS13A-211ENST00000484581 SPIDRQ14159 915 aa5.62□□□□□ -1.51
VPS13A-211ENST00000484581 PGS1Q32NB8 556 aa5.62□□□□□ -1.51
VPS13A-211ENST00000484581 KIAA1841Q6NSI8 718 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms