RNA–Protein interactions for RNA: ENST00000461098.1

HCFC1-204, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-204ENST00000461098 ARHGEF3Q9NR81 526 aa13.36□□□□□ -0.27
HCFC1-204ENST00000461098 SLC2A4RGQ9NR83 387 aa13.36□□□□□ -0.27
HCFC1-204ENST00000461098 STK39Q9UEW8 545 aa13.36□□□□□ -0.27
HCFC1-204ENST00000461098 MTCL1Q9Y4B5 1905 aaKnown RBP13.35□□□□□ -0.27
HCFC1-204ENST00000461098 SPTBN2O15020 2390 aa13.35□□□□□ -0.27
HCFC1-204ENST00000461098 ESYT2A0FGR8 921 aa13.35□□□□□ -0.27
HCFC1-204ENST00000461098 C2CD2LO14523 706 aa13.35□□□□□ -0.27
HCFC1-204ENST00000461098 ALDH2P05091 517 aa13.35□□□□□ -0.27
HCFC1-204ENST00000461098 LAMP2P13473 410 aa13.35□□□□□ -0.27
HCFC1-204ENST00000461098 SFPQP23246 707 aaKnown RBP eCLIP13.35□□□□□ -0.27
HCFC1-204ENST00000461098 RAB27AP51159 221 aa13.35□□□□□ -0.27
HCFC1-204ENST00000461098 STARD6P59095 220 aa13.35□□□□□ -0.27
HCFC1-204ENST00000461098 CDC42EP1Q00587 391 aa13.35□□□□□ -0.27
HCFC1-204ENST00000461098 HTR4Q13639 388 aa13.35□□□□□ -0.27
HCFC1-204ENST00000461098 UBXN11Q5T124 520 aa13.35□□□□□ -0.27
HCFC1-204ENST00000461098 ZNF410Q86VK4 478 aa13.35□□□□□ -0.27
HCFC1-204ENST00000461098 KSR1Q8IVT5 923 aa13.35□□□□□ -0.27
HCFC1-204ENST00000461098 PJA1Q8NG27 643 aa13.35□□□□□ -0.27
HCFC1-204ENST00000461098 GJA10Q969M2 543 aa13.35□□□□□ -0.27
HCFC1-204ENST00000461098 TCEANC2Q96MN5 208 aa13.35□□□□□ -0.27
HCFC1-204ENST00000461098 HINFPQ9BQA5 517 aa13.35□□□□□ -0.27
HCFC1-204ENST00000461098 TMEM175Q9BSA9 504 aa13.35□□□□□ -0.27
HCFC1-204ENST00000461098 RPP25Q9BUL9 199 aaKnown RBP13.35□□□□□ -0.27
HCFC1-204ENST00000461098 HERC2P3Q9BVR0 1158 aa13.35□□□□□ -0.27
HCFC1-204ENST00000461098 FOXQ1Q9C009 403 aa13.35□□□□□ -0.27
HCFC1-204ENST00000461098 UNC45AQ9H3U1 944 aa13.35□□□□□ -0.27
HCFC1-204ENST00000461098 IFT122Q9HBG6 1241 aa13.35□□□□□ -0.27
HCFC1-204ENST00000461098 RXFP1Q9HBX9 757 aa13.35□□□□□ -0.27
HCFC1-204ENST00000461098 FAN1Q9Y2M0 1017 aa13.35□□□□□ -0.27
HCFC1-204ENST00000461098 PCDHB2Q9Y5E7 798 aa13.35□□□□□ -0.27
HCFC1-204ENST00000461098 PATJQ8NI35 1801 aa13.34□□□□□ -0.27
HCFC1-204ENST00000461098 DOCK6Q96HP0 2047 aa13.34□□□□□ -0.27
HCFC1-204ENST00000461098 F8W810 466 aa13.34□□□□□ -0.27
HCFC1-204ENST00000461098 ZBTB43O43298 467 aa13.34□□□□□ -0.27
HCFC1-204ENST00000461098 SPATA31D3P0C874 917 aa13.34□□□□□ -0.27
HCFC1-204ENST00000461098 HOXA11P31270 313 aaPredicted RBP13.34□□□□□ -0.27
HCFC1-204ENST00000461098 AK2P54819 239 aa13.34□□□□□ -0.27
HCFC1-204ENST00000461098 NONOQ15233 471 aaKnown RBP eCLIP13.34□□□□□ -0.27
HCFC1-204ENST00000461098 MTERF2Q49AM1 385 aa13.34□□□□□ -0.27
HCFC1-204ENST00000461098 DCLRE1AQ6PJP8 1040 aa13.34□□□□□ -0.27
HCFC1-204ENST00000461098 B3GNT9Q6UX72 402 aa13.34□□□□□ -0.27
HCFC1-204ENST00000461098 SYNE3Q6ZMZ3 975 aa13.34□□□□□ -0.27
HCFC1-204ENST00000461098 SPATA31D4Q6ZUB0 917 aa13.34□□□□□ -0.27
HCFC1-204ENST00000461098 SMG7Q92540 1137 aaKnown RBP13.34□□□□□ -0.27
HCFC1-204ENST00000461098 STAMQ92783 540 aa13.34□□□□□ -0.27
HCFC1-204ENST00000461098 SLC5A5Q92911 643 aa13.34□□□□□ -0.27
HCFC1-204ENST00000461098 RIT2Q99578 217 aa13.34□□□□□ -0.27
HCFC1-204ENST00000461098 NT5C3AQ9H0P0 336 aa13.34□□□□□ -0.27
HCFC1-204ENST00000461098 AGPAT5Q9NUQ2 364 aa13.34□□□□□ -0.27
HCFC1-204ENST00000461098 SUCLA2Q9P2R7 463 aaPredicted RBP13.34□□□□□ -0.27
HCFC1-204ENST00000461098 NUMBLQ9Y6R0 609 aa13.34□□□□□ -0.27
HCFC1-204ENST00000461098 CHMP2AO43633 222 aa13.33□□□□□ -0.28
HCFC1-204ENST00000461098 MAFO75444 373 aaPredicted RBP13.33□□□□□ -0.28
HCFC1-204ENST00000461098 GLUD1P00367 558 aa13.33□□□□□ -0.28
HCFC1-204ENST00000461098 POMCP01189 267 aa13.33□□□□□ -0.28
HCFC1-204ENST00000461098 ADH1AP07327 375 aa13.33□□□□□ -0.28
HCFC1-204ENST00000461098 SFNP31947 248 aa13.33□□□□□ -0.28
HCFC1-204ENST00000461098 ADD1P35611 737 aaKnown RBP13.33□□□□□ -0.28
HCFC1-204ENST00000461098 ATXN1P54253 815 aaKnown RBP13.33□□□□□ -0.28
HCFC1-204ENST00000461098 GPC5P78333 572 aa13.33□□□□□ -0.28
HCFC1-204ENST00000461098 LILRA6Q6PI73 481 aa13.33□□□□□ -0.28
HCFC1-204ENST00000461098 RHPN2Q8IUC4 686 aa13.33□□□□□ -0.28
HCFC1-204ENST00000461098 COLGALT2Q8IYK4 626 aa13.33□□□□□ -0.28
HCFC1-204ENST00000461098 HDAC7Q8WUI4 952 aa13.33□□□□□ -0.28
HCFC1-204ENST00000461098 PGBD4Q96DM1 585 aa13.33□□□□□ -0.28
HCFC1-204ENST00000461098 DDX23Q9BUQ8 820 aaKnown RBP13.33□□□□□ -0.28
HCFC1-204ENST00000461098 INO80BQ9C086 356 aaPredicted RBP13.33□□□□□ -0.28
HCFC1-204ENST00000461098 MINDY3Q9H8M7 445 aa13.33□□□□□ -0.28
HCFC1-204ENST00000461098 RSAD1Q9HA92 442 aa13.33□□□□□ -0.28
HCFC1-204ENST00000461098 CHST7Q9NS84 486 aa13.33□□□□□ -0.28
HCFC1-204ENST00000461098 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.33□□□□□ -0.28
HCFC1-204ENST00000461098 TCEAL9Q9UHQ7 104 aa13.33□□□□□ -0.28
HCFC1-204ENST00000461098 MTF2Q9Y483 593 aaPredicted RBP13.33□□□□□ -0.28
HCFC1-204ENST00000461098 MIA3Q5JRA6 1907 aa13.33□□□□□ -0.28
HCFC1-204ENST00000461098 MYH15Q9Y2K3 1946 aa13.33□□□□□ -0.28
HCFC1-204ENST00000461098 KINO60870 393 aaKnown RBP13.32□□□□□ -0.28
HCFC1-204ENST00000461098 PSMD10O75832 226 aa13.32□□□□□ -0.28
HCFC1-204ENST00000461098 URODP06132 367 aa13.32□□□□□ -0.28
HCFC1-204ENST00000461098 RFX1P22670 979 aa13.32□□□□□ -0.28
HCFC1-204ENST00000461098 TGM1P22735 817 aa13.32□□□□□ -0.28
HCFC1-204ENST00000461098 JAK3P52333 1124 aa13.32□□□□□ -0.28
HCFC1-204ENST00000461098 DSG1Q02413 1049 aa13.32□□□□□ -0.28
HCFC1-204ENST00000461098 DSC1Q08554 894 aa13.32□□□□□ -0.28
HCFC1-204ENST00000461098 ZNF528Q3MIS6 628 aa13.32□□□□□ -0.28
HCFC1-204ENST00000461098 XKR3Q5GH77 459 aa13.32□□□□□ -0.28
HCFC1-204ENST00000461098 VARS2Q5ST30 1063 aaKnown RBP13.32□□□□□ -0.28
HCFC1-204ENST00000461098 ANO5Q75V66 913 aa13.32□□□□□ -0.28
HCFC1-204ENST00000461098 CATSPER4Q7RTX7 472 aa13.32□□□□□ -0.28
HCFC1-204ENST00000461098 REXO1Q8N1G1 1221 aaKnown RBP13.32□□□□□ -0.28
HCFC1-204ENST00000461098 SMG8Q8ND04 991 aaKnown RBP13.32□□□□□ -0.28
HCFC1-204ENST00000461098 URGCPQ8TCY9 931 aa13.32□□□□□ -0.28
HCFC1-204ENST00000461098 FGF14Q92915 247 aa13.32□□□□□ -0.28
HCFC1-204ENST00000461098 MIOSQ9NXC5 875 aa13.32□□□□□ -0.28
HCFC1-204ENST00000461098 KANSL3Q9P2N6 904 aa13.32□□□□□ -0.28
HCFC1-204ENST00000461098 SEPT9Q9UHD8 586 aaPredicted RBP13.32□□□□□ -0.28
HCFC1-204ENST00000461098 GOLGA8AA7E2F4 631 aa13.31□□□□□ -0.28
HCFC1-204ENST00000461098 GOLGA8BA8MQT2 603 aa13.31□□□□□ -0.28
HCFC1-204ENST00000461098 TGM5O43548 720 aa13.31□□□□□ -0.28
HCFC1-204ENST00000461098 GAS7O60861 476 aa13.31□□□□□ -0.28
HCFC1-204ENST00000461098 C1RP00736 705 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms