RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 SPTLC3Q9NUV7 552 aa6.95□□□□□ -1.3
HMGB3P5-201ENST00000428894 NCDNQ9UBB6 729 aa6.95□□□□□ -1.3
HMGB3P5-201ENST00000428894 CFAP43Q8NDM7 1665 aa6.95□□□□□ -1.3
HMGB3P5-201ENST00000428894 MYPNQ86TC9 1320 aa6.95□□□□□ -1.3
HMGB3P5-201ENST00000428894 ZCCHC11Q5TAX3 1644 aaKnown RBP6.94□□□□□ -1.3
HMGB3P5-201ENST00000428894 WDR7Q9Y4E6 1490 aa6.94□□□□□ -1.3
HMGB3P5-201ENST00000428894 A0A0A6YYK5 440 aaPredicted RBP6.94□□□□□ -1.3
HMGB3P5-201ENST00000428894 KRTAP23-1A1A580 65 aa6.94□□□□□ -1.3
HMGB3P5-201ENST00000428894 ZNF202O95125 648 aa6.94□□□□□ -1.3
HMGB3P5-201ENST00000428894 KIR2DL3P43628 341 aa6.94□□□□□ -1.3
HMGB3P5-201ENST00000428894 HMGA2P52926 109 aa6.94□□□□□ -1.3
HMGB3P5-201ENST00000428894 OCRLQ01968 901 aa6.94□□□□□ -1.3
HMGB3P5-201ENST00000428894 CRHR2Q13324 411 aa6.94□□□□□ -1.3
HMGB3P5-201ENST00000428894 IGFL4Q6B9Z1 124 aa6.94□□□□□ -1.3
HMGB3P5-201ENST00000428894 KIAA0907Q7Z7F0 614 aaPredicted RBP6.94□□□□□ -1.3
HMGB3P5-201ENST00000428894 OR2W6PQ8NHA6 318 aa6.94□□□□□ -1.3
HMGB3P5-201ENST00000428894 FERMT2Q96AC1 680 aa6.94□□□□□ -1.3
HMGB3P5-201ENST00000428894 MIEF2Q96C03 454 aa6.94□□□□□ -1.3
HMGB3P5-201ENST00000428894 SOX7Q9BT81 388 aa6.94□□□□□ -1.3
HMGB3P5-201ENST00000428894 MRIQ9BWK5 157 aa6.94□□□□□ -1.3
HMGB3P5-201ENST00000428894 USP36Q9P275 1121 aaKnown RBP6.94□□□□□ -1.3
HMGB3P5-201ENST00000428894 PHLDB1Q86UU1 1377 aa6.94□□□□□ -1.3
HMGB3P5-201ENST00000428894 PTPRMP28827 1452 aa6.93□□□□□ -1.3
HMGB3P5-201ENST00000428894 FSBPO95073 299 aa6.93□□□□□ -1.3
HMGB3P5-201ENST00000428894 LSP1P33241 339 aa6.93□□□□□ -1.3
HMGB3P5-201ENST00000428894 LSSP48449 732 aa6.93□□□□□ -1.3
HMGB3P5-201ENST00000428894 IL2P60568 153 aa6.93□□□□□ -1.3
HMGB3P5-201ENST00000428894 KLF10Q13118 480 aa6.93□□□□□ -1.3
HMGB3P5-201ENST00000428894 RRP1BQ14684 758 aaKnown RBP6.93□□□□□ -1.3
HMGB3P5-201ENST00000428894 ELAVL1Q15717 326 aaKnown RBP6.93□□□□□ -1.3
HMGB3P5-201ENST00000428894 GPR158Q5T848 1215 aa6.93□□□□□ -1.3
HMGB3P5-201ENST00000428894 TMPRSS6Q8IU80 811 aa6.93□□□□□ -1.3
HMGB3P5-201ENST00000428894 GSPT2Q8IYD1 628 aaKnown RBP6.93□□□□□ -1.3
HMGB3P5-201ENST00000428894 CMTM4Q8IZR5 234 aa6.93□□□□□ -1.3
HMGB3P5-201ENST00000428894 CACTINQ8WUQ7 758 aaKnown RBP6.93□□□□□ -1.3
HMGB3P5-201ENST00000428894 ARL8AQ96BM9 186 aa6.93□□□□□ -1.3
HMGB3P5-201ENST00000428894 PCED1AQ9H1Q7 454 aa6.93□□□□□ -1.3
HMGB3P5-201ENST00000428894 KIF21BO75037 1637 aa6.92□□□□□ -1.3
HMGB3P5-201ENST00000428894 ST20-MTHFSA0A0A6YYL1 179 aa6.92□□□□□ -1.3
HMGB3P5-201ENST00000428894 LCHNA4D1U4 455 aa6.92□□□□□ -1.3
HMGB3P5-201ENST00000428894 NARSO43776 548 aaKnown RBP6.92□□□□□ -1.3
HMGB3P5-201ENST00000428894 FKBP9O95302 570 aa6.92□□□□□ -1.3
HMGB3P5-201ENST00000428894 GAAP10253 952 aa6.92□□□□□ -1.3
HMGB3P5-201ENST00000428894 ADCYAP1R1P41586 468 aa6.92□□□□□ -1.3
HMGB3P5-201ENST00000428894 SCNN1GP51170 649 aa6.92□□□□□ -1.3
HMGB3P5-201ENST00000428894 PHC1P78364 1004 aa6.92□□□□□ -1.3
HMGB3P5-201ENST00000428894 ZBTB41Q5SVQ8 909 aa6.92□□□□□ -1.3
HMGB3P5-201ENST00000428894 FKBP15Q5T1M5 1219 aa6.92□□□□□ -1.3
HMGB3P5-201ENST00000428894 Q6ZRM9 215 aa6.92□□□□□ -1.3
HMGB3P5-201ENST00000428894 FKBP9P1Q75LS8 142 aa6.92□□□□□ -1.3
HMGB3P5-201ENST00000428894 ZNF610Q8N9Z0 462 aa6.92□□□□□ -1.3
HMGB3P5-201ENST00000428894 LEO1Q8WVC0 666 aaPredicted RBP6.92□□□□□ -1.3
HMGB3P5-201ENST00000428894 MS4A5Q9H3V2 200 aa6.92□□□□□ -1.3
HMGB3P5-201ENST00000428894 ZNF703Q9H7S9 590 aaPredicted RBP6.92□□□□□ -1.3
HMGB3P5-201ENST00000428894 ING1Q9UK53 422 aaPredicted RBP6.92□□□□□ -1.3
HMGB3P5-201ENST00000428894 USP18Q9UMW8 372 aa6.92□□□□□ -1.3
HMGB3P5-201ENST00000428894 PCDHB6Q9Y5E3 794 aa6.92□□□□□ -1.3
HMGB3P5-201ENST00000428894 DISP3Q9P2K9 1392 aa6.92□□□□□ -1.3
HMGB3P5-201ENST00000428894 ARAP3Q8WWN8 1544 aa6.91□□□□□ -1.3
HMGB3P5-201ENST00000428894 DISP1Q96F81 1524 aa6.91□□□□□ -1.3
HMGB3P5-201ENST00000428894 GSG1L2A8MUP6 293 aa6.91□□□□□ -1.3
HMGB3P5-201ENST00000428894 NPEPPSP55786 919 aa6.91□□□□□ -1.3
HMGB3P5-201ENST00000428894 ABHD18Q0P651 414 aa6.91□□□□□ -1.3
HMGB3P5-201ENST00000428894 CNGB1Q14028 1251 aaPredicted RBP6.91□□□□□ -1.3
HMGB3P5-201ENST00000428894 TERF2Q15554 542 aa6.91□□□□□ -1.3
HMGB3P5-201ENST00000428894 C11orf74Q86VG3 221 aa6.91□□□□□ -1.3
HMGB3P5-201ENST00000428894 CDYL2Q8N8U2 506 aa6.91□□□□□ -1.3
HMGB3P5-201ENST00000428894 PPP1R14CQ8TAE6 165 aa6.91□□□□□ -1.3
HMGB3P5-201ENST00000428894 PARPBPQ9NWS1 579 aa6.91□□□□□ -1.3
HMGB3P5-201ENST00000428894 ING3Q9NXR8 418 aa6.91□□□□□ -1.3
HMGB3P5-201ENST00000428894 CEP72Q9P209 647 aa6.91□□□□□ -1.3
HMGB3P5-201ENST00000428894 ARID4BQ4LE39 1312 aaPredicted RBP6.91□□□□□ -1.3
HMGB3P5-201ENST00000428894 PCF11O94913 1555 aaKnown RBP6.91□□□□□ -1.3
HMGB3P5-201ENST00000428894 ADAMTSL3P82987 1691 aa6.9□□□□□ -1.3
HMGB3P5-201ENST00000428894 A0A087X0B3 334 aa6.9□□□□□ -1.3
HMGB3P5-201ENST00000428894 PRSS38A1L453 326 aa6.9□□□□□ -1.3
HMGB3P5-201ENST00000428894 ENPP3O14638 875 aa6.9□□□□□ -1.3
HMGB3P5-201ENST00000428894 MTSS1O43312 755 aa6.9□□□□□ -1.3
HMGB3P5-201ENST00000428894 MYCLP1P12525 358 aaPredicted RBP6.9□□□□□ -1.3
HMGB3P5-201ENST00000428894 MCM7P33993 719 aa6.9□□□□□ -1.3
HMGB3P5-201ENST00000428894 CD69Q07108 199 aa6.9□□□□□ -1.3
HMGB3P5-201ENST00000428894 TUBA3CQ13748 450 aa6.9□□□□□ -1.3
HMGB3P5-201ENST00000428894 MFSD5Q6N075 450 aa6.9□□□□□ -1.3
HMGB3P5-201ENST00000428894 TUBA3EQ6PEY2 450 aa6.9□□□□□ -1.3
HMGB3P5-201ENST00000428894 NOP9Q86U38 636 aaKnown RBP6.9□□□□□ -1.3
HMGB3P5-201ENST00000428894 ELOA2Q8IYF1 753 aaPredicted RBP6.9□□□□□ -1.3
HMGB3P5-201ENST00000428894 PIK3C3Q8NEB9 887 aa6.9□□□□□ -1.3
HMGB3P5-201ENST00000428894 ZNF512Q96ME7 567 aaPredicted RBP6.9□□□□□ -1.3
HMGB3P5-201ENST00000428894 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.9□□□□□ -1.3
HMGB3P5-201ENST00000428894 UGGT2Q9NYU1 1516 aa6.9□□□□□ -1.31
HMGB3P5-201ENST00000428894 PDE8AO60658 829 aa6.89□□□□□ -1.31
HMGB3P5-201ENST00000428894 MFAP3LO75121 409 aa6.89□□□□□ -1.31
HMGB3P5-201ENST00000428894 PFKMP08237 780 aa6.89□□□□□ -1.31
HMGB3P5-201ENST00000428894 MAN2A2P49641 1150 aa6.89□□□□□ -1.31
HMGB3P5-201ENST00000428894 SPIDRQ14159 915 aa6.89□□□□□ -1.31
HMGB3P5-201ENST00000428894 FHL2Q14192 279 aa6.89□□□□□ -1.31
HMGB3P5-201ENST00000428894 FRMD7Q6ZUT3 714 aa6.89□□□□□ -1.31
HMGB3P5-201ENST00000428894 UNC5BQ8IZJ1 945 aa6.89□□□□□ -1.31
HMGB3P5-201ENST00000428894 GAB3Q8WWW8 586 aa6.89□□□□□ -1.31
HMGB3P5-201ENST00000428894 GPR87Q9BY21 358 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms