RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 MRPL9Q9BYD2 267 aaKnown RBP23.65■■□□□ 1.38
CPNE1-211ENST00000420363 LMAN2LQ9H0V9 348 aa23.65■■□□□ 1.38
CPNE1-211ENST00000420363 NSUN3Q9H649 340 aaKnown RBP23.65■■□□□ 1.38
CPNE1-211ENST00000420363 CD320Q9NPF0 282 aa23.65■■□□□ 1.38
CPNE1-211ENST00000420363 KCND2Q9NZV8 630 aa23.65■■□□□ 1.38
CPNE1-211ENST00000420363 SSTR3P32745 418 aaPredicted RBP23.64■■□□□ 1.37
CPNE1-211ENST00000420363 PLA2G5P39877 138 aa23.64■■□□□ 1.37
CPNE1-211ENST00000420363 FAM187BQ17R55 369 aa23.64■■□□□ 1.37
CPNE1-211ENST00000420363 CLLU1OSQ5K130 101 aa23.64■■□□□ 1.37
CPNE1-211ENST00000420363 GJD3Q8N144 294 aa23.64■■□□□ 1.37
CPNE1-211ENST00000420363 BSNDQ8WZ55 320 aa23.64■■□□□ 1.37
CPNE1-211ENST00000420363 CALML4Q96GE6 196 aa23.64■■□□□ 1.37
CPNE1-211ENST00000420363 DRC1Q96MC2 740 aa23.64■■□□□ 1.37
CPNE1-211ENST00000420363 AAASQ9NRG9 546 aa23.64■■□□□ 1.37
CPNE1-211ENST00000420363 PRMT7Q9NVM4 692 aaPredicted RBP23.64■■□□□ 1.37
CPNE1-211ENST00000420363 DAXXQ9UER7 740 aaPredicted RBP23.64■■□□□ 1.37
CPNE1-211ENST00000420363 ATG2AQ2TAZ0 1938 aa23.63■■□□□ 1.37
CPNE1-211ENST00000420363 GRXCR2A6NFK2 248 aa23.63■■□□□ 1.37
CPNE1-211ENST00000420363 H3BQ06 376 aaPredicted RBP23.63■■□□□ 1.37
CPNE1-211ENST00000420363 IL9P15248 144 aa23.63■■□□□ 1.37
CPNE1-211ENST00000420363 GUCY2CP25092 1073 aa23.63■■□□□ 1.37
CPNE1-211ENST00000420363 NASPP49321 788 aaPredicted RBP23.63■■□□□ 1.37
CPNE1-211ENST00000420363 CSPP1Q1MSJ5 1256 aa23.63■■□□□ 1.37
CPNE1-211ENST00000420363 RINT1Q6NUQ1 792 aa23.63■■□□□ 1.37
CPNE1-211ENST00000420363 FAM173BQ6P4H8 233 aa23.63■■□□□ 1.37
CPNE1-211ENST00000420363 C1orf186Q6ZWK4 172 aa23.63■■□□□ 1.37
CPNE1-211ENST00000420363 SYT2Q8N9I0 419 aaPredicted RBP23.63■■□□□ 1.37
CPNE1-211ENST00000420363 CNNM3Q8NE01 707 aa23.63■■□□□ 1.37
CPNE1-211ENST00000420363 PGBD4Q96DM1 585 aa23.63■■□□□ 1.37
CPNE1-211ENST00000420363 PABPC5Q96DU9 382 aaKnown RBP23.63■■□□□ 1.37
CPNE1-211ENST00000420363 IFT74Q96LB3 600 aa23.63■■□□□ 1.37
CPNE1-211ENST00000420363 USP28Q96RU2 1077 aa23.63■■□□□ 1.37
CPNE1-211ENST00000420363 FBXO2Q9UK22 296 aaPredicted RBP23.63■■□□□ 1.37
CPNE1-211ENST00000420363 HCN4Q9Y3Q4 1203 aa23.63■■□□□ 1.37
CPNE1-211ENST00000420363 PCDHB2Q9Y5E7 798 aa23.63■■□□□ 1.37
CPNE1-211ENST00000420363 SRPRBQ9Y5M8 271 aaKnown RBP23.63■■□□□ 1.37
CPNE1-211ENST00000420363 CNTNAP2Q9UHC6 1331 aa23.62■■□□□ 1.37
CPNE1-211ENST00000420363 PI4K2BG5E9Z4 385 aa23.62■■□□□ 1.37
CPNE1-211ENST00000420363 NCK2O43639 380 aa23.62■■□□□ 1.37
CPNE1-211ENST00000420363 GPR37L1O60883 481 aa23.62■■□□□ 1.37
CPNE1-211ENST00000420363 LAG3P18627 525 aa23.62■■□□□ 1.37
CPNE1-211ENST00000420363 GRIN1Q05586 938 aa23.62■■□□□ 1.37
CPNE1-211ENST00000420363 ZRSR1Q15695 479 aaKnown RBP23.62■■□□□ 1.37
CPNE1-211ENST00000420363 UBXN11Q5T124 520 aa23.62■■□□□ 1.37
CPNE1-211ENST00000420363 MRPL10Q7Z7H8 261 aaKnown RBP23.62■■□□□ 1.37
CPNE1-211ENST00000420363 RNF169Q8NCN4 708 aa23.62■■□□□ 1.37
CPNE1-211ENST00000420363 RUSC1Q9BVN2 902 aa23.62■■□□□ 1.37
CPNE1-211ENST00000420363 CCSER1Q9C0I3 900 aa23.62■■□□□ 1.37
CPNE1-211ENST00000420363 FZD8Q9H461 694 aa23.62■■□□□ 1.37
CPNE1-211ENST00000420363 C17orf75Q9HAS0 396 aa23.62■■□□□ 1.37
CPNE1-211ENST00000420363 PHLPP2Q6ZVD8 1323 aa23.61■■□□□ 1.37
CPNE1-211ENST00000420363 ZSCAN22P10073 491 aaPredicted RBP23.61■■□□□ 1.37
CPNE1-211ENST00000420363 ARF4P18085 180 aaPredicted RBP23.61■■□□□ 1.37
CPNE1-211ENST00000420363 EFNA5P52803 228 aa23.61■■□□□ 1.37
CPNE1-211ENST00000420363 SLC12A3P55017 1021 aa23.61■■□□□ 1.37
CPNE1-211ENST00000420363 SLC39A14Q15043 492 aa23.61■■□□□ 1.37
CPNE1-211ENST00000420363 DEPTORQ8TB45 409 aa23.61■■□□□ 1.37
CPNE1-211ENST00000420363 CCDC113Q9H0I3 377 aa23.61■■□□□ 1.37
CPNE1-211ENST00000420363 CSRNP2Q9H175 543 aa23.61■■□□□ 1.37
CPNE1-211ENST00000420363 CWH43Q9H720 699 aa23.61■■□□□ 1.37
CPNE1-211ENST00000420363 FAM50BQ9Y247 325 aa23.61■■□□□ 1.37
CPNE1-211ENST00000420363 PCDHB12Q9Y5F1 795 aa23.61■■□□□ 1.37
CPNE1-211ENST00000420363 ZMYM2Q9UBW7 1377 aa23.61■■□□□ 1.37
CPNE1-211ENST00000420363 MYH11P35749 1972 aa23.6■■□□□ 1.37
CPNE1-211ENST00000420363 CARNS1A5YM72 827 aa23.6■■□□□ 1.37
CPNE1-211ENST00000420363 HIP1RO75146 1068 aa23.6■■□□□ 1.37
CPNE1-211ENST00000420363 PLA2G4BP0C869 781 aa23.6■■□□□ 1.37
CPNE1-211ENST00000420363 NCLP19338 710 aaKnown RBP23.6■■□□□ 1.37
CPNE1-211ENST00000420363 MAPK7Q13164 816 aa23.6■■□□□ 1.37
CPNE1-211ENST00000420363 DMP1Q13316 513 aaPredicted RBP23.6■■□□□ 1.37
CPNE1-211ENST00000420363 MAPK6Q16659 721 aa23.6■■□□□ 1.37
CPNE1-211ENST00000420363 GLB1LQ6UWU2 654 aa23.6■■□□□ 1.37
CPNE1-211ENST00000420363 DAW1Q8N136 415 aa23.6■■□□□ 1.37
CPNE1-211ENST00000420363 HELQQ8TDG4 1101 aa23.6■■□□□ 1.37
CPNE1-211ENST00000420363 ZNF396Q96N95 335 aaPredicted RBP23.6■■□□□ 1.37
CPNE1-211ENST00000420363 TYW1Q9NV66 732 aaKnown RBP23.6■■□□□ 1.37
CPNE1-211ENST00000420363 CLDND1Q9NY35 253 aa23.6■■□□□ 1.37
CPNE1-211ENST00000420363 PLXNA4Q9HCM2 1894 aa23.6■■□□□ 1.37
CPNE1-211ENST00000420363 A0A1B0GUA9 196 aa23.59■■□□□ 1.37
CPNE1-211ENST00000420363 FAM86C2PA6NEL3 165 aa23.59■■□□□ 1.37
CPNE1-211ENST00000420363 F13A1P00488 732 aa23.59■■□□□ 1.37
CPNE1-211ENST00000420363 MARCKSP29966 332 aaPredicted RBP23.59■■□□□ 1.37
CPNE1-211ENST00000420363 COL19A1Q14993 1142 aa23.59■■□□□ 1.37
CPNE1-211ENST00000420363 SPOUT1Q5T280 376 aaKnown RBP23.59■■□□□ 1.37
CPNE1-211ENST00000420363 COLGALT1Q8NBJ5 622 aa23.59■■□□□ 1.37
CPNE1-211ENST00000420363 CPB2Q96IY4 423 aa23.59■■□□□ 1.37
CPNE1-211ENST00000420363 UBN1Q9NPG3 1134 aa23.59■■□□□ 1.37
CPNE1-211ENST00000420363 MYO7AQ13402 2215 aa23.58■■□□□ 1.37
CPNE1-211ENST00000420363 GRM6O15303 877 aa23.58■■□□□ 1.37
CPNE1-211ENST00000420363 PRKCBP05771 671 aa23.58■■□□□ 1.37
CPNE1-211ENST00000420363 PLCG1P19174 1290 aa23.58■■□□□ 1.37
CPNE1-211ENST00000420363 TXLNAP40222 546 aa23.58■■□□□ 1.37
CPNE1-211ENST00000420363 CEBPZQ03701 1054 aaKnown RBP23.58■■□□□ 1.37
CPNE1-211ENST00000420363 UBE3AQ05086 875 aa23.58■■□□□ 1.37
CPNE1-211ENST00000420363 KARSQ15046 597 aaKnown RBP23.58■■□□□ 1.37
CPNE1-211ENST00000420363 SLC27A1Q6PCB7 646 aa23.58■■□□□ 1.37
CPNE1-211ENST00000420363 AGMOQ6ZNB7 445 aa23.58■■□□□ 1.37
CPNE1-211ENST00000420363 LRRC55Q6ZSA7 311 aa23.58■■□□□ 1.37
CPNE1-211ENST00000420363 KRI1Q8N9T8 703 aaKnown RBP23.58■■□□□ 1.37
CPNE1-211ENST00000420363 KLHL23Q8NBE8 558 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms