RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-206ENST00000416651 ACSF2Q96CM8 615 aaPredicted RBP9.93□□□□□ -0.82
NIF3L1-206ENST00000416651 KAT14Q9H8E8 782 aa9.93□□□□□ -0.82
NIF3L1-206ENST00000416651 ARHGEF3Q9NR81 526 aa9.93□□□□□ -0.82
NIF3L1-206ENST00000416651 IGF2RP11717 2491 aa9.92□□□□□ -0.82
NIF3L1-206ENST00000416651 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.92□□□□□ -0.82
NIF3L1-206ENST00000416651 MEIS3P2A8K0S8 358 aa9.92□□□□□ -0.82
NIF3L1-206ENST00000416651 RFPL2O75678 378 aa9.92□□□□□ -0.82
NIF3L1-206ENST00000416651 SSBP05455 408 aaKnown RBP eCLIP9.92□□□□□ -0.82
NIF3L1-206ENST00000416651 SRFP11831 508 aa9.92□□□□□ -0.82
NIF3L1-206ENST00000416651 BMP2P12643 396 aa9.92□□□□□ -0.82
NIF3L1-206ENST00000416651 LMNB2Q03252 620 aa9.92□□□□□ -0.82
NIF3L1-206ENST00000416651 KRT17Q04695 432 aa9.92□□□□□ -0.82
NIF3L1-206ENST00000416651 SNW1Q13573 536 aaKnown RBP9.92□□□□□ -0.82
NIF3L1-206ENST00000416651 PHLDB3Q6NSJ2 640 aa9.92□□□□□ -0.82
NIF3L1-206ENST00000416651 DCLRE1AQ6PJP8 1040 aa9.92□□□□□ -0.82
NIF3L1-206ENST00000416651 KLHL5Q96PQ7 755 aa9.92□□□□□ -0.82
NIF3L1-206ENST00000416651 ZSCAN10Q96SZ4 725 aaPredicted RBP9.92□□□□□ -0.82
NIF3L1-206ENST00000416651 SENP7Q9BQF6 1050 aa9.92□□□□□ -0.82
NIF3L1-206ENST00000416651 DZANK1Q9NVP4 752 aa9.92□□□□□ -0.82
NIF3L1-206ENST00000416651 SPATA6Q9NWH7 488 aaPredicted RBP9.92□□□□□ -0.82
NIF3L1-206ENST00000416651 ZSWIM5Q9P217 1185 aa9.92□□□□□ -0.82
NIF3L1-206ENST00000416651 IGSF9Q9P2J2 1179 aa9.92□□□□□ -0.82
NIF3L1-206ENST00000416651 MIA3Q5JRA6 1907 aa9.92□□□□□ -0.82
NIF3L1-206ENST00000416651 SMIM35A0A1B0GVV1 85 aa9.91□□□□□ -0.82
NIF3L1-206ENST00000416651 PALM3A6NDB9 673 aaPredicted RBP9.91□□□□□ -0.82
NIF3L1-206ENST00000416651 PRR5-ARHGAP8B1AHC4 643 aa9.91□□□□□ -0.82
NIF3L1-206ENST00000416651 C1QTNF9BB2RNN3 333 aa9.91□□□□□ -0.82
NIF3L1-206ENST00000416651 M0QZ92 97 aa9.91□□□□□ -0.82
NIF3L1-206ENST00000416651 SLC30A4O14863 429 aa9.91□□□□□ -0.82
NIF3L1-206ENST00000416651 LILRB5O75023 590 aa9.91□□□□□ -0.82
NIF3L1-206ENST00000416651 VTNP04004 478 aa9.91□□□□□ -0.82
NIF3L1-206ENST00000416651 C1QTNF9P0C862 333 aa9.91□□□□□ -0.82
NIF3L1-206ENST00000416651 SPATA31D3P0C874 917 aa9.91□□□□□ -0.82
NIF3L1-206ENST00000416651 CTSAP10619 480 aa9.91□□□□□ -0.82
NIF3L1-206ENST00000416651 KLRC1P26715 233 aa9.91□□□□□ -0.82
NIF3L1-206ENST00000416651 PMLP29590 882 aa9.91□□□□□ -0.82
NIF3L1-206ENST00000416651 CLCN4P51793 760 aa9.91□□□□□ -0.82
NIF3L1-206ENST00000416651 GPC5P78333 572 aa9.91□□□□□ -0.82
NIF3L1-206ENST00000416651 ARHGAP8P85298 464 aa9.91□□□□□ -0.82
NIF3L1-206ENST00000416651 NMIQ13287 307 aaPredicted RBP9.91□□□□□ -0.82
NIF3L1-206ENST00000416651 PTPN14Q15678 1187 aa9.91□□□□□ -0.82
NIF3L1-206ENST00000416651 QPCTQ16769 361 aa9.91□□□□□ -0.82
NIF3L1-206ENST00000416651 SPATA31D4Q6ZUB0 917 aa9.91□□□□□ -0.82
NIF3L1-206ENST00000416651 ECHDC2Q86YB7 292 aa9.91□□□□□ -0.82
NIF3L1-206ENST00000416651 ZBTB44Q8NCP5 570 aa9.91□□□□□ -0.82
NIF3L1-206ENST00000416651 ARMC2Q8NEN0 867 aa9.91□□□□□ -0.82
NIF3L1-206ENST00000416651 LPPQ93052 612 aa9.91□□□□□ -0.82
NIF3L1-206ENST00000416651 SMARCAD1Q9H4L7 1026 aa9.91□□□□□ -0.82
NIF3L1-206ENST00000416651 DCTPP1Q9H773 170 aa9.91□□□□□ -0.82
NIF3L1-206ENST00000416651 C1orf112Q9NSG2 853 aa9.91□□□□□ -0.82
NIF3L1-206ENST00000416651 DNAJB4Q9UDY4 337 aa9.91□□□□□ -0.82
NIF3L1-206ENST00000416651 RRN3P2A6NIE6 340 aa9.9□□□□□ -0.82
NIF3L1-206ENST00000416651 SHISA7A6NL88 538 aa9.9□□□□□ -0.82
NIF3L1-206ENST00000416651 ZBTB42B2RXF5 422 aa9.9□□□□□ -0.82
NIF3L1-206ENST00000416651 RNF225M0QZC1 329 aaPredicted RBP9.9□□□□□ -0.82
NIF3L1-206ENST00000416651 MEIS2O14770 477 aa9.9□□□□□ -0.82
NIF3L1-206ENST00000416651 GPR32O75388 356 aa9.9□□□□□ -0.82
NIF3L1-206ENST00000416651 CSDE1O75534 798 aaKnown RBP9.9□□□□□ -0.82
NIF3L1-206ENST00000416651 CNPP09543 421 aaKnown RBP9.9□□□□□ -0.82
NIF3L1-206ENST00000416651 NR5A1Q13285 461 aa9.9□□□□□ -0.82
NIF3L1-206ENST00000416651 PCNX4Q63HM2 1172 aa9.9□□□□□ -0.82
NIF3L1-206ENST00000416651 CYB5R4Q7L1T6 521 aa9.9□□□□□ -0.82
NIF3L1-206ENST00000416651 TAS1R1Q7RTX1 841 aa9.9□□□□□ -0.82
NIF3L1-206ENST00000416651 BPHLQ86WA6 291 aaPredicted RBP9.9□□□□□ -0.82
NIF3L1-206ENST00000416651 LRRC43Q8N309 656 aa9.9□□□□□ -0.82
NIF3L1-206ENST00000416651 ESR2Q92731 530 aa9.9□□□□□ -0.82
NIF3L1-206ENST00000416651 NELL1Q92832 810 aa9.9□□□□□ -0.82
NIF3L1-206ENST00000416651 GPATCH3Q96I76 525 aa9.9□□□□□ -0.82
NIF3L1-206ENST00000416651 EPC1Q9H2F5 836 aa9.9□□□□□ -0.82
NIF3L1-206ENST00000416651 RIOX1Q9H6W3 641 aa9.9□□□□□ -0.82
NIF3L1-206ENST00000416651 ELAC1Q9H777 363 aaKnown RBP9.9□□□□□ -0.82
NIF3L1-206ENST00000416651 SFXN1Q9H9B4 322 aa9.9□□□□□ -0.82
NIF3L1-206ENST00000416651 SLC24A3Q9HC58 644 aa9.9□□□□□ -0.82
NIF3L1-206ENST00000416651 MAP3K20Q9NYL2 800 aaKnown RBP9.9□□□□□ -0.82
NIF3L1-206ENST00000416651 ZMIZ1Q9ULJ6 1067 aa9.9□□□□□ -0.82
NIF3L1-206ENST00000416651 DDX19BQ9UMR2 479 aa9.9□□□□□ -0.82
NIF3L1-206ENST00000416651 NUMBLQ9Y6R0 609 aa9.9□□□□□ -0.82
NIF3L1-206ENST00000416651 MYH15Q9Y2K3 1946 aa9.9□□□□□ -0.83
NIF3L1-206ENST00000416651 SALL3Q9BXA9 1300 aa9.89□□□□□ -0.83
NIF3L1-206ENST00000416651 CCDC195A0A1B0GUA6 201 aa9.89□□□□□ -0.83
NIF3L1-206ENST00000416651 CYSRT1A8MQ03 144 aa9.89□□□□□ -0.83
NIF3L1-206ENST00000416651 LAMTOR5O43504 91 aa9.89□□□□□ -0.83
NIF3L1-206ENST00000416651 ZC3H11AO75152 810 aaKnown RBP eCLIP9.89□□□□□ -0.83
NIF3L1-206ENST00000416651 TOP3BO95985 862 aaKnown RBP9.89□□□□□ -0.83
NIF3L1-206ENST00000416651 ATP4AP20648 1035 aa9.89□□□□□ -0.83
NIF3L1-206ENST00000416651 SDHBP21912 280 aa9.89□□□□□ -0.83
NIF3L1-206ENST00000416651 PPM1AP35813 382 aa9.89□□□□□ -0.83
NIF3L1-206ENST00000416651 AFF1P51825 1210 aaKnown RBP9.89□□□□□ -0.83
NIF3L1-206ENST00000416651 STARD6P59095 220 aa9.89□□□□□ -0.83
NIF3L1-206ENST00000416651 SRSF5Q13243 272 aaKnown RBP9.89□□□□□ -0.83
NIF3L1-206ENST00000416651 HTR4Q13639 388 aa9.89□□□□□ -0.83
NIF3L1-206ENST00000416651 UBXN2BQ14CS0 331 aa9.89□□□□□ -0.83
NIF3L1-206ENST00000416651 SEC23AQ15436 765 aa9.89□□□□□ -0.83
NIF3L1-206ENST00000416651 C4orf48Q5BLP8 95 aa9.89□□□□□ -0.83
NIF3L1-206ENST00000416651 PARM1Q6UWI2 310 aa9.89□□□□□ -0.83
NIF3L1-206ENST00000416651 TRMT1LQ7Z2T5 733 aaKnown RBP9.89□□□□□ -0.83
NIF3L1-206ENST00000416651 LINC00528Q8N1L1 170 aa9.89□□□□□ -0.83
NIF3L1-206ENST00000416651 GPR161Q8N6U8 529 aaKnown RBP9.89□□□□□ -0.83
NIF3L1-206ENST00000416651 ATRIPQ8WXE1 791 aa9.89□□□□□ -0.83
NIF3L1-206ENST00000416651 FGF14Q92915 247 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms