RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 ZMYND10O75800 440 aa9.81□□□□□ -0.84
TDP1-202ENST00000393452 KIF4AO95239 1232 aa9.81□□□□□ -0.84
TDP1-202ENST00000393452 TNFRSF8P28908 595 aa9.81□□□□□ -0.84
TDP1-202ENST00000393452 GCLMP48507 274 aa9.81□□□□□ -0.84
TDP1-202ENST00000393452 GALCP54803 685 aa9.81□□□□□ -0.84
TDP1-202ENST00000393452 SNRNP35Q16560 246 aaKnown RBP9.81□□□□□ -0.84
TDP1-202ENST00000393452 SLC39A4Q6P5W5 647 aa9.81□□□□□ -0.84
TDP1-202ENST00000393452 LBX2Q6XYB7 198 aa9.81□□□□□ -0.84
TDP1-202ENST00000393452 TRMT1LQ7Z2T5 733 aaKnown RBP9.81□□□□□ -0.84
TDP1-202ENST00000393452 DNAAF5Q86Y56 855 aa9.81□□□□□ -0.84
TDP1-202ENST00000393452 GLYCTKQ8IVS8 523 aa9.81□□□□□ -0.84
TDP1-202ENST00000393452 AENQ8WTP8 325 aaKnown RBP9.81□□□□□ -0.84
TDP1-202ENST00000393452 PDE11AQ9HCR9 933 aa9.81□□□□□ -0.84
TDP1-202ENST00000393452 KMT5AQ9NQR1 393 aa9.81□□□□□ -0.84
TDP1-202ENST00000393452 TMEM59LQ9UK28 342 aa9.81□□□□□ -0.84
TDP1-202ENST00000393452 COQ4Q9Y3A0 265 aa9.81□□□□□ -0.84
TDP1-202ENST00000393452 TELO2Q9Y4R8 837 aa9.81□□□□□ -0.84
TDP1-202ENST00000393452 LRRN2O75325 713 aa9.81□□□□□ -0.84
TDP1-202ENST00000393452 ATG7O95352 703 aa9.81□□□□□ -0.84
TDP1-202ENST00000393452 TMEM253P0C7T8 217 aa9.81□□□□□ -0.84
TDP1-202ENST00000393452 MXI1P50539 228 aa9.81□□□□□ -0.84
TDP1-202ENST00000393452 PRKCEQ02156 737 aa9.81□□□□□ -0.84
TDP1-202ENST00000393452 ENPEPQ07075 957 aa9.81□□□□□ -0.84
TDP1-202ENST00000393452 GPS2Q13227 327 aa9.81□□□□□ -0.84
TDP1-202ENST00000393452 VGLL4Q14135 290 aa9.81□□□□□ -0.84
TDP1-202ENST00000393452 RPS6KA1Q15418 735 aa9.81□□□□□ -0.84
TDP1-202ENST00000393452 CBWD2Q8IUF1 395 aa9.81□□□□□ -0.84
TDP1-202ENST00000393452 ARHGEF19Q8IW93 802 aa9.81□□□□□ -0.84
TDP1-202ENST00000393452 PARD3BQ8TEW8 1205 aa9.81□□□□□ -0.84
TDP1-202ENST00000393452 LMBR1Q8WVP7 490 aa9.81□□□□□ -0.84
TDP1-202ENST00000393452 RFFLQ8WZ73 363 aa9.81□□□□□ -0.84
TDP1-202ENST00000393452 PBKQ96KB5 322 aa9.81□□□□□ -0.84
TDP1-202ENST00000393452 KIFC3Q9BVG8 833 aa9.81□□□□□ -0.84
TDP1-202ENST00000393452 ZCCHC17Q9NP64 241 aaKnown RBP9.81□□□□□ -0.84
TDP1-202ENST00000393452 CYP26B1Q9NR63 512 aa9.81□□□□□ -0.84
TDP1-202ENST00000393452 STIM2Q9P246 746 aa9.81□□□□□ -0.84
TDP1-202ENST00000393452 STXBP5LQ9Y2K9 1186 aa9.81□□□□□ -0.84
TDP1-202ENST00000393452 ADGRA3Q8IWK6 1321 aa9.8□□□□□ -0.84
TDP1-202ENST00000393452 ZC3H4Q9UPT8 1303 aaKnown RBP9.8□□□□□ -0.84
TDP1-202ENST00000393452 SUPT20HL2P0C7V6 817 aa9.8□□□□□ -0.84
TDP1-202ENST00000393452 NOP2P46087 812 aaKnown RBP9.8□□□□□ -0.84
TDP1-202ENST00000393452 AARSP49588 968 aaKnown RBP eCLIP9.8□□□□□ -0.84
TDP1-202ENST00000393452 SOX10P56693 466 aa9.8□□□□□ -0.84
TDP1-202ENST00000393452 SP2Q02086 613 aa9.8□□□□□ -0.84
TDP1-202ENST00000393452 STXBP2Q15833 593 aa9.8□□□□□ -0.84
TDP1-202ENST00000393452 ARHGAP44Q17R89 818 aa9.8□□□□□ -0.84
TDP1-202ENST00000393452 BRDTQ58F21 947 aaPredicted RBP9.8□□□□□ -0.84
TDP1-202ENST00000393452 XKR3Q5GH77 459 aa9.8□□□□□ -0.84
TDP1-202ENST00000393452 SYCE1Q8N0S2 351 aa9.8□□□□□ -0.84
TDP1-202ENST00000393452 TMC2Q8TDI7 906 aa9.8□□□□□ -0.84
TDP1-202ENST00000393452 MFSD14AQ96MC6 490 aa9.8□□□□□ -0.84
TDP1-202ENST00000393452 UBE2TQ9NPD8 197 aaPredicted RBP9.8□□□□□ -0.84
TDP1-202ENST00000393452 ARHGAP28Q9P2N2 729 aa9.8□□□□□ -0.84
TDP1-202ENST00000393452 SUCLA2Q9P2R7 463 aaPredicted RBP9.8□□□□□ -0.84
TDP1-202ENST00000393452 GOLGA8IPA6NC78 632 aa9.8□□□□□ -0.84
TDP1-202ENST00000393452 GOLGA8JA6NMD2 632 aa9.8□□□□□ -0.84
TDP1-202ENST00000393452 POLR3GO15318 223 aaPredicted RBP9.8□□□□□ -0.84
TDP1-202ENST00000393452 MATR3P43243 847 aaKnown RBP eCLIP9.8□□□□□ -0.84
TDP1-202ENST00000393452 PPATQ06203 517 aa9.8□□□□□ -0.84
TDP1-202ENST00000393452 TREML2Q5T2D2 321 aa9.8□□□□□ -0.84
TDP1-202ENST00000393452 C8orf74Q6P047 294 aa9.8□□□□□ -0.84
TDP1-202ENST00000393452 MIS18BP1Q6P0N0 1132 aa9.8□□□□□ -0.84
TDP1-202ENST00000393452 TAS1R3Q7RTX0 852 aa9.8□□□□□ -0.84
TDP1-202ENST00000393452 NT5DC3Q86UY8 548 aa9.8□□□□□ -0.84
TDP1-202ENST00000393452 PALB2Q86YC2 1186 aa9.8□□□□□ -0.84
TDP1-202ENST00000393452 USP38Q8NB14 1042 aa9.8□□□□□ -0.84
TDP1-202ENST00000393452 ACTRT1Q8TDG2 376 aa9.8□□□□□ -0.84
TDP1-202ENST00000393452 TAF4BQ92750 862 aa9.8□□□□□ -0.84
TDP1-202ENST00000393452 SELENOOQ9BVL4 669 aa9.8□□□□□ -0.84
TDP1-202ENST00000393452 GOLPH3Q9H4A6 298 aa9.8□□□□□ -0.84
TDP1-202ENST00000393452 ATP6V0A4Q9HBG4 840 aa9.8□□□□□ -0.84
TDP1-202ENST00000393452 HPCAL4Q9UM19 191 aa9.8□□□□□ -0.84
TDP1-202ENST00000393452 MAFBQ9Y5Q3 323 aaPredicted RBP9.8□□□□□ -0.84
TDP1-202ENST00000393452 ANKRD62A6NC57 917 aa9.79□□□□□ -0.84
TDP1-202ENST00000393452 ATP4AP20648 1035 aa9.79□□□□□ -0.84
TDP1-202ENST00000393452 TNFAIP3P21580 790 aa9.79□□□□□ -0.84
TDP1-202ENST00000393452 GARTP22102 1010 aa9.79□□□□□ -0.84
TDP1-202ENST00000393452 GTF2H1P32780 548 aa9.79□□□□□ -0.84
TDP1-202ENST00000393452 ABCD1P33897 745 aa9.79□□□□□ -0.84
TDP1-202ENST00000393452 GPC3P51654 580 aa9.79□□□□□ -0.84
TDP1-202ENST00000393452 HADHBP55084 474 aaKnown RBP9.79□□□□□ -0.84
TDP1-202ENST00000393452 CNTN2Q02246 1040 aa9.79□□□□□ -0.84
TDP1-202ENST00000393452 TCEAL1Q15170 157 aa9.79□□□□□ -0.84
TDP1-202ENST00000393452 KRT39Q6A163 491 aa9.79□□□□□ -0.84
TDP1-202ENST00000393452 RIOX2Q8IUF8 465 aa9.79□□□□□ -0.84
TDP1-202ENST00000393452 FAM71AQ8IYT1 594 aa9.79□□□□□ -0.84
TDP1-202ENST00000393452 SLC35G2Q8TBE7 412 aa9.79□□□□□ -0.84
TDP1-202ENST00000393452 ZNF526Q8TF50 670 aaPredicted RBP9.79□□□□□ -0.84
TDP1-202ENST00000393452 SAAL1Q96ER3 474 aa9.79□□□□□ -0.84
TDP1-202ENST00000393452 HES6Q96HZ4 224 aa9.79□□□□□ -0.84
TDP1-202ENST00000393452 AGPAT1Q99943 283 aa9.79□□□□□ -0.84
TDP1-202ENST00000393452 ACBD3Q9H3P7 528 aa9.79□□□□□ -0.84
TDP1-202ENST00000393452 TMEM8AQ9HCN3 771 aa9.79□□□□□ -0.84
TDP1-202ENST00000393452 MED4Q9NPJ6 270 aa9.79□□□□□ -0.84
TDP1-202ENST00000393452 FBXO40Q9UH90 709 aa9.79□□□□□ -0.84
TDP1-202ENST00000393452 SEPT9Q9UHD8 586 aaPredicted RBP9.79□□□□□ -0.84
TDP1-202ENST00000393452 KCNG1Q9UIX4 513 aa9.79□□□□□ -0.84
TDP1-202ENST00000393452 SYNGAP1Q96PV0 1343 aa9.79□□□□□ -0.84
TDP1-202ENST00000393452 SIP14410 1827 aa9.79□□□□□ -0.84
TDP1-202ENST00000393452 IGKV6D-21A0A0A0MT36 114 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms