RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 PIK3R2O00459 728 aa19.24■□□□□ 0.67
PTPDC1-202ENST00000375360 MCF2LO15068 1137 aa19.24■□□□□ 0.67
PTPDC1-202ENST00000375360 MAFGO15525 162 aa19.24■□□□□ 0.67
PTPDC1-202ENST00000375360 RARBP10826 455 aa19.24■□□□□ 0.67
PTPDC1-202ENST00000375360 EPC2Q52LR7 807 aa19.24■□□□□ 0.67
PTPDC1-202ENST00000375360 POLR3CQ9BUI4 534 aaPredicted RBP19.24■□□□□ 0.67
PTPDC1-202ENST00000375360 PIN4Q9Y237 131 aaKnown RBP19.24■□□□□ 0.67
PTPDC1-202ENST00000375360 IFT172Q9UG01 1749 aa19.24■□□□□ 0.67
PTPDC1-202ENST00000375360 A0A087X0B3 334 aa19.24■□□□□ 0.67
PTPDC1-202ENST00000375360 ADM5C9JUS6 153 aa19.24■□□□□ 0.67
PTPDC1-202ENST00000375360 EVI5O60447 810 aa19.24■□□□□ 0.67
PTPDC1-202ENST00000375360 SLC25A27O95847 323 aa19.24■□□□□ 0.67
PTPDC1-202ENST00000375360 CRY2Q49AN0 593 aa19.24■□□□□ 0.67
PTPDC1-202ENST00000375360 SMAP1Q8IYB5 467 aaPredicted RBP19.24■□□□□ 0.67
PTPDC1-202ENST00000375360 BCAS4Q8TDM0 211 aa19.24■□□□□ 0.67
PTPDC1-202ENST00000375360 PDCD2LQ9BRP1 358 aa19.24■□□□□ 0.67
PTPDC1-202ENST00000375360 FAN1Q9Y2M0 1017 aa19.24■□□□□ 0.67
PTPDC1-202ENST00000375360 TCF7P36402 384 aaPredicted RBP19.24■□□□□ 0.67
PTPDC1-202ENST00000375360 CASP4P49662 377 aa19.24■□□□□ 0.67
PTPDC1-202ENST00000375360 SLC12A2P55011 1212 aa19.24■□□□□ 0.67
PTPDC1-202ENST00000375360 P3H4Q92791 437 aa19.24■□□□□ 0.67
PTPDC1-202ENST00000375360 FUCA2Q9BTY2 467 aa19.24■□□□□ 0.67
PTPDC1-202ENST00000375360 HOMER3Q9NSC5 361 aa19.24■□□□□ 0.67
PTPDC1-202ENST00000375360 CHORDC1Q9UHD1 332 aaPredicted RBP19.24■□□□□ 0.67
PTPDC1-202ENST00000375360 FAM86B1E9PN63 330 aa19.23■□□□□ 0.67
PTPDC1-202ENST00000375360 FAM86B2P0C5J1 330 aa19.23■□□□□ 0.67
PTPDC1-202ENST00000375360 CEP57Q86XR8 500 aa19.23■□□□□ 0.67
PTPDC1-202ENST00000375360 SCN4BQ8IWT1 228 aa19.23■□□□□ 0.67
PTPDC1-202ENST00000375360 UBE4BO95155 1302 aa19.23■□□□□ 0.67
PTPDC1-202ENST00000375360 CASP8Q14790 479 aa19.23■□□□□ 0.67
PTPDC1-202ENST00000375360 PNMA8AQ86V59 439 aaPredicted RBP19.23■□□□□ 0.67
PTPDC1-202ENST00000375360 APEX2Q9UBZ4 518 aa19.23■□□□□ 0.67
PTPDC1-202ENST00000375360 SCINQ9Y6U3 715 aa19.23■□□□□ 0.67
PTPDC1-202ENST00000375360 M0QYV0 167 aa19.23■□□□□ 0.67
PTPDC1-202ENST00000375360 LMNB2Q03252 620 aa19.23■□□□□ 0.67
PTPDC1-202ENST00000375360 GABPB1Q06547 395 aaPredicted RBP19.23■□□□□ 0.67
PTPDC1-202ENST00000375360 SHROOM1Q2M3G4 852 aaPredicted RBP19.23■□□□□ 0.67
PTPDC1-202ENST00000375360 BEST2Q8NFU1 509 aa19.23■□□□□ 0.67
PTPDC1-202ENST00000375360 ZNF185O15231 689 aa19.23■□□□□ 0.67
PTPDC1-202ENST00000375360 PSMC1P62191 440 aaKnown RBP19.23■□□□□ 0.67
PTPDC1-202ENST00000375360 MFSD14CQ5VZR4 134 aa19.23■□□□□ 0.67
PTPDC1-202ENST00000375360 EFCAB12Q6NXP0 572 aa19.23■□□□□ 0.67
PTPDC1-202ENST00000375360 AGAP1Q9UPQ3 857 aa19.23■□□□□ 0.67
PTPDC1-202ENST00000375360 BBS9Q3SYG4 887 aa19.22■□□□□ 0.67
PTPDC1-202ENST00000375360 B4GALNT4Q76KP1 1039 aa19.22■□□□□ 0.67
PTPDC1-202ENST00000375360 PARK7Q99497 189 aaKnown RBP19.22■□□□□ 0.67
PTPDC1-202ENST00000375360 EDEM3Q9BZQ6 932 aa19.22■□□□□ 0.67
PTPDC1-202ENST00000375360 GOLPH3Q9H4A6 298 aa19.22■□□□□ 0.67
PTPDC1-202ENST00000375360 PFASO15067 1338 aa19.22■□□□□ 0.67
PTPDC1-202ENST00000375360 CETPP11597 493 aa19.22■□□□□ 0.67
PTPDC1-202ENST00000375360 PHBP35232 272 aa19.22■□□□□ 0.67
PTPDC1-202ENST00000375360 SOX10P56693 466 aa19.22■□□□□ 0.67
PTPDC1-202ENST00000375360 RNF10Q8N5U6 811 aaKnown RBP19.22■□□□□ 0.67
PTPDC1-202ENST00000375360 PKNOX2Q96KN3 472 aa19.22■□□□□ 0.67
PTPDC1-202ENST00000375360 FMO2Q99518 471 aa19.22■□□□□ 0.67
PTPDC1-202ENST00000375360 A8MXQ7 604 aa19.22■□□□□ 0.67
PTPDC1-202ENST00000375360 GH1P01241 217 aa19.22■□□□□ 0.67
PTPDC1-202ENST00000375360 PLEKP08567 350 aaPredicted RBP19.22■□□□□ 0.67
PTPDC1-202ENST00000375360 SLC51AQ86UW1 340 aa19.22■□□□□ 0.67
PTPDC1-202ENST00000375360 MED4Q9NPJ6 270 aa19.22■□□□□ 0.67
PTPDC1-202ENST00000375360 HEY1Q9Y5J3 304 aa19.22■□□□□ 0.67
PTPDC1-202ENST00000375360 FYB2Q5VWT5 728 aa19.21■□□□□ 0.67
PTPDC1-202ENST00000375360 DNAAF3Q8N9W5 541 aa19.21■□□□□ 0.67
PTPDC1-202ENST00000375360 AGPAT1Q99943 283 aa19.21■□□□□ 0.67
PTPDC1-202ENST00000375360 AGPAT3Q9NRZ7 376 aa19.21■□□□□ 0.67
PTPDC1-202ENST00000375360 MED1Q15648 1581 aaPredicted RBP19.21■□□□□ 0.67
PTPDC1-202ENST00000375360 TMEM150BA6NC51 233 aa19.21■□□□□ 0.67
PTPDC1-202ENST00000375360 ZBTB39O15060 712 aa19.21■□□□□ 0.67
PTPDC1-202ENST00000375360 TBXAS1P24557 533 aaPredicted RBP19.21■□□□□ 0.67
PTPDC1-202ENST00000375360 GALCP54803 685 aa19.21■□□□□ 0.67
PTPDC1-202ENST00000375360 SLC18A3Q16572 532 aa19.21■□□□□ 0.67
PTPDC1-202ENST00000375360 TTC7AQ9ULT0 858 aaPredicted RBP19.21■□□□□ 0.67
PTPDC1-202ENST00000375360 FNDC3AQ9Y2H6 1198 aaKnown RBP19.21■□□□□ 0.67
PTPDC1-202ENST00000375360 SNX9Q9Y5X1 595 aa19.21■□□□□ 0.67
PTPDC1-202ENST00000375360 ANO9A1A5B4 782 aa19.21■□□□□ 0.67
PTPDC1-202ENST00000375360 HSPA6P17066 643 aa19.21■□□□□ 0.67
PTPDC1-202ENST00000375360 ADORA2BP29275 332 aa19.21■□□□□ 0.67
PTPDC1-202ENST00000375360 MXD4Q14582 209 aaPredicted RBP19.21■□□□□ 0.67
PTPDC1-202ENST00000375360 BBOF1Q8ND07 529 aa19.21■□□□□ 0.67
PTPDC1-202ENST00000375360 ANKS1AQ92625 1134 aa19.21■□□□□ 0.67
PTPDC1-202ENST00000375360 ACAP3Q96P50 834 aa19.21■□□□□ 0.67
PTPDC1-202ENST00000375360 CAPS2Q9BXY5 557 aa19.21■□□□□ 0.67
PTPDC1-202ENST00000375360 ACSL3O95573 720 aa19.21■□□□□ 0.67
PTPDC1-202ENST00000375360 NCOA4Q13772 614 aa19.21■□□□□ 0.67
PTPDC1-202ENST00000375360 GIT2Q14161 759 aa19.21■□□□□ 0.67
PTPDC1-202ENST00000375360 GNASQ5JWF2 1037 aa19.21■□□□□ 0.67
PTPDC1-202ENST00000375360 FBXO16Q8IX29 292 aaPredicted RBP19.21■□□□□ 0.67
PTPDC1-202ENST00000375360 SEMA6BQ9H3T3 888 aa19.21■□□□□ 0.67
PTPDC1-202ENST00000375360 KCND2Q9NZV8 630 aa19.21■□□□□ 0.67
PTPDC1-202ENST00000375360 MRC1P22897 1456 aa19.2■□□□□ 0.66
PTPDC1-202ENST00000375360 RNF40O75150 1001 aa19.2■□□□□ 0.66
PTPDC1-202ENST00000375360 PSMC4P43686 418 aa19.2■□□□□ 0.66
PTPDC1-202ENST00000375360 TTI2Q6NXR4 508 aa19.2■□□□□ 0.66
PTPDC1-202ENST00000375360 C15orf52Q6ZUT6 534 aaKnown RBP19.2■□□□□ 0.66
PTPDC1-202ENST00000375360 RNF139Q8WU17 664 aa19.2■□□□□ 0.66
PTPDC1-202ENST00000375360 CPA5Q8WXQ8 436 aa19.2■□□□□ 0.66
PTPDC1-202ENST00000375360 GPRASP2Q96D09 838 aa19.2■□□□□ 0.66
PTPDC1-202ENST00000375360 STK33Q9BYT3 514 aa19.2■□□□□ 0.66
PTPDC1-202ENST00000375360 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.2■□□□□ 0.66
PTPDC1-202ENST00000375360 CSDE1O75534 798 aaKnown RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms