RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 U2AF1L4Q8WU68 220 aaKnown RBP22.09■■□□□ 1.13
TMEFF1-201ENST00000374879 SPATA31A1Q5TZJ5 1347 aa22.09■■□□□ 1.13
TMEFF1-201ENST00000374879 MAGEA13PA6NCF6 341 aa22.09■■□□□ 1.13
TMEFF1-201ENST00000374879 ANKRD63C9JTQ0 380 aa22.09■■□□□ 1.13
TMEFF1-201ENST00000374879 PCP11498 1178 aaKnown RBP22.09■■□□□ 1.13
TMEFF1-201ENST00000374879 UCHL3P15374 230 aa22.09■■□□□ 1.13
TMEFF1-201ENST00000374879 GALCP54803 685 aa22.09■■□□□ 1.13
TMEFF1-201ENST00000374879 NPEPPSP55786 919 aa22.09■■□□□ 1.13
TMEFF1-201ENST00000374879 KCNH2Q12809 1159 aa22.09■■□□□ 1.13
TMEFF1-201ENST00000374879 SF3B3Q15393 1217 aaKnown RBP22.09■■□□□ 1.13
TMEFF1-201ENST00000374879 RASIP1Q5U651 963 aa22.09■■□□□ 1.13
TMEFF1-201ENST00000374879 DPY19L2P1Q6NXN4 242 aa22.09■■□□□ 1.13
TMEFF1-201ENST00000374879 DDX50Q9BQ39 737 aaKnown RBP22.09■■□□□ 1.13
TMEFF1-201ENST00000374879 FAM192AQ9GZU8 254 aa22.09■■□□□ 1.13
TMEFF1-201ENST00000374879 USP40Q9NVE5 1235 aa22.09■■□□□ 1.13
TMEFF1-201ENST00000374879 BLOC1S6Q9UL45 172 aa22.09■■□□□ 1.13
TMEFF1-201ENST00000374879 PCDHA3Q9Y5H8 950 aa22.09■■□□□ 1.13
TMEFF1-201ENST00000374879 DDX3XO00571 662 aaKnown RBP eCLIP22.08■■□□□ 1.134e-6■■□□□ 12.4
TMEFF1-201ENST00000374879 ADAMTS2O95450 1211 aa22.08■■□□□ 1.13
TMEFF1-201ENST00000374879 RXRBP28702 533 aa22.08■■□□□ 1.13
TMEFF1-201ENST00000374879 TNIP1Q15025 636 aa22.08■■□□□ 1.13
TMEFF1-201ENST00000374879 HEATR3Q7Z4Q2 680 aa22.08■■□□□ 1.13
TMEFF1-201ENST00000374879 NELFCDQ8IXH7 590 aa22.08■■□□□ 1.13
TMEFF1-201ENST00000374879 FBXO41Q8TF61 875 aa22.08■■□□□ 1.13
TMEFF1-201ENST00000374879 CELF1Q92879 486 aaKnown RBP22.08■■□□□ 1.13
TMEFF1-201ENST00000374879 GRAMD1AQ96CP6 724 aa22.08■■□□□ 1.13
TMEFF1-201ENST00000374879 FGFBP2Q9BYJ0 223 aa22.08■■□□□ 1.13
TMEFF1-201ENST00000374879 TBC1D7Q9P0N9 293 aa22.08■■□□□ 1.13
TMEFF1-201ENST00000374879 RREB1Q92766 1687 aa22.08■■□□□ 1.12
TMEFF1-201ENST00000374879 ECE2O60344 883 aa22.08■■□□□ 1.12
TMEFF1-201ENST00000374879 LMNAP02545 664 aaKnown RBP22.08■■□□□ 1.12
TMEFF1-201ENST00000374879 CYP1A1P04798 512 aaPredicted RBP22.08■■□□□ 1.12
TMEFF1-201ENST00000374879 TXKP42681 527 aa22.08■■□□□ 1.12
TMEFF1-201ENST00000374879 YARSP54577 528 aaKnown RBP22.08■■□□□ 1.12
TMEFF1-201ENST00000374879 SLC35G2Q8TBE7 412 aa22.08■■□□□ 1.12
TMEFF1-201ENST00000374879 KLRK1P26718 216 aa22.07■■□□□ 1.12
TMEFF1-201ENST00000374879 GIT2Q14161 759 aa22.07■■□□□ 1.12
TMEFF1-201ENST00000374879 TTC27Q6P3X3 843 aa22.07■■□□□ 1.12
TMEFF1-201ENST00000374879 NSUN4Q96CB9 384 aaKnown RBP22.07■■□□□ 1.12
TMEFF1-201ENST00000374879 SERPINB12Q96P63 405 aa22.07■■□□□ 1.12
TMEFF1-201ENST00000374879 NT5C3AQ9H0P0 336 aa22.07■■□□□ 1.12
TMEFF1-201ENST00000374879 CARD9Q9H257 536 aa22.07■■□□□ 1.12
TMEFF1-201ENST00000374879 TMOD4Q9NZQ9 345 aa22.07■■□□□ 1.12
TMEFF1-201ENST00000374879 OCRLQ01968 901 aa22.07■■□□□ 1.12
TMEFF1-201ENST00000374879 RCN1Q15293 331 aa22.07■■□□□ 1.12
TMEFF1-201ENST00000374879 CLEC4GQ6UXB4 293 aa22.07■■□□□ 1.12
TMEFF1-201ENST00000374879 MIGA2Q7L4E1 593 aa22.07■■□□□ 1.12
TMEFF1-201ENST00000374879 ALG3Q92685 438 aa22.07■■□□□ 1.12
TMEFF1-201ENST00000374879 CDC42EP4Q9H3Q1 356 aaKnown RBP22.07■■□□□ 1.12
TMEFF1-201ENST00000374879 PARP2Q9UGN5 583 aa22.07■■□□□ 1.12
TMEFF1-201ENST00000374879 CETN3O15182 167 aa22.06■■□□□ 1.12
TMEFF1-201ENST00000374879 MECOMQ03112 1051 aa22.06■■□□□ 1.12
TMEFF1-201ENST00000374879 RRP1BQ14684 758 aaKnown RBP22.06■■□□□ 1.12
TMEFF1-201ENST00000374879 SH3RF3Q8TEJ3 882 aaPredicted RBP22.06■■□□□ 1.12
TMEFF1-201ENST00000374879 CEP63Q96MT8 703 aa22.06■■□□□ 1.12
TMEFF1-201ENST00000374879 RUNDC3BQ96NL0 473 aa22.06■■□□□ 1.12
TMEFF1-201ENST00000374879 TMEM165Q9HC07 324 aa22.06■■□□□ 1.12
TMEFF1-201ENST00000374879 PICK1Q9NRD5 415 aa22.06■■□□□ 1.12
TMEFF1-201ENST00000374879 DIS3Q9Y2L1 958 aaKnown RBP22.06■■□□□ 1.12
TMEFF1-201ENST00000374879 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.06■■□□□ 1.12
TMEFF1-201ENST00000374879 DLEC1Q9Y238 1755 aa22.06■■□□□ 1.12
TMEFF1-201ENST00000374879 MAPK13O15264 365 aa22.06■■□□□ 1.12
TMEFF1-201ENST00000374879 PHF2O75151 1096 aa22.06■■□□□ 1.12
TMEFF1-201ENST00000374879 ECEL1O95672 775 aa22.06■■□□□ 1.12
TMEFF1-201ENST00000374879 UBTFL6P0CB48 400 aaPredicted RBP22.06■■□□□ 1.12
TMEFF1-201ENST00000374879 CYP4X1Q8N118 509 aa22.06■■□□□ 1.12
TMEFF1-201ENST00000374879 PRELID2Q8N945 189 aa22.06■■□□□ 1.12
TMEFF1-201ENST00000374879 FAM163AQ96GL9 167 aaPredicted RBP22.06■■□□□ 1.12
TMEFF1-201ENST00000374879 VCX3BQ9H321 246 aa22.06■■□□□ 1.12
TMEFF1-201ENST00000374879 VCX3AQ9NNX9 186 aa22.06■■□□□ 1.12
TMEFF1-201ENST00000374879 DCP1AQ9NPI6 582 aaPredicted RBP22.06■■□□□ 1.12
TMEFF1-201ENST00000374879 PDP2Q9P2J9 529 aa22.06■■□□□ 1.12
TMEFF1-201ENST00000374879 AJAP1Q9UKB5 411 aaPredicted RBP22.06■■□□□ 1.12
TMEFF1-201ENST00000374879 USH1CQ9Y6N9 552 aa22.06■■□□□ 1.12
TMEFF1-201ENST00000374879 KCNQ2O43526 872 aa22.05■■□□□ 1.12
TMEFF1-201ENST00000374879 MARK3P27448 753 aa22.05■■□□□ 1.12
TMEFF1-201ENST00000374879 PRKCIP41743 596 aa22.05■■□□□ 1.12
TMEFF1-201ENST00000374879 LMNB2Q03252 620 aa22.05■■□□□ 1.12
TMEFF1-201ENST00000374879 CERKLQ49MI3 558 aaPredicted RBP22.05■■□□□ 1.12
TMEFF1-201ENST00000374879 ACBD5Q5T8D3 534 aaPredicted RBP22.05■■□□□ 1.12
TMEFF1-201ENST00000374879 C4orf50Q6ZRC1 276 aa22.05■■□□□ 1.12
TMEFF1-201ENST00000374879 KCNK18Q7Z418 384 aa22.05■■□□□ 1.12
TMEFF1-201ENST00000374879 CDK5RAP3Q96JB5 506 aa22.05■■□□□ 1.12
TMEFF1-201ENST00000374879 STK17AQ9UEE5 414 aa22.05■■□□□ 1.12
TMEFF1-201ENST00000374879 A0A1B0GUL6 1792 aa22.05■■□□□ 1.12
TMEFF1-201ENST00000374879 COASYQ13057 564 aa22.05■■□□□ 1.12
TMEFF1-201ENST00000374879 DPY19L2Q6NUT2 758 aa22.05■■□□□ 1.12
TMEFF1-201ENST00000374879 FOXR2Q6PJQ5 311 aa22.05■■□□□ 1.12
TMEFF1-201ENST00000374879 DSTYKQ6XUX3 929 aa22.05■■□□□ 1.12
TMEFF1-201ENST00000374879 ARHGEF18Q6ZSZ5 1173 aa22.05■■□□□ 1.12
TMEFF1-201ENST00000374879 ZDHHC14Q8IZN3 488 aa22.05■■□□□ 1.12
TMEFF1-201ENST00000374879 DAGLBQ8NCG7 672 aa22.05■■□□□ 1.12
TMEFF1-201ENST00000374879 ART4Q93070 314 aa22.05■■□□□ 1.12
TMEFF1-201ENST00000374879 IGSF9BQ9UPX0 1349 aa22.05■■□□□ 1.12
TMEFF1-201ENST00000374879 PODXLO00592 558 aa22.04■■□□□ 1.12
TMEFF1-201ENST00000374879 KRT36O76013 467 aa22.04■■□□□ 1.12
TMEFF1-201ENST00000374879 GNA14O95837 355 aa22.04■■□□□ 1.12
TMEFF1-201ENST00000374879 ZCCHC18P0CG32 403 aa22.04■■□□□ 1.12
TMEFF1-201ENST00000374879 VCAM1P19320 739 aa22.04■■□□□ 1.12
TMEFF1-201ENST00000374879 ATP5DP30049 168 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 196.2 ms