RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 QRICH2Q9H0J4 1663 aa6.2□□□□□ -1.42
PMS1-202ENST00000374826 HIP1RO75146 1068 aa6.2□□□□□ -1.42
PMS1-202ENST00000374826 MMEP08473 750 aa6.2□□□□□ -1.42
PMS1-202ENST00000374826 IGFALSP35858 605 aa6.2□□□□□ -1.42
PMS1-202ENST00000374826 ADCY8P40145 1251 aa6.2□□□□□ -1.42
PMS1-202ENST00000374826 NPM2Q86SE8 214 aaKnown RBP6.2□□□□□ -1.42
PMS1-202ENST00000374826 GPR135Q8IZ08 494 aa6.2□□□□□ -1.42
PMS1-202ENST00000374826 C2orf69Q8N8R5 385 aa6.2□□□□□ -1.42
PMS1-202ENST00000374826 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.2□□□□□ -1.42
PMS1-202ENST00000374826 CDC42EP3Q9UKI2 254 aa6.2□□□□□ -1.42
PMS1-202ENST00000374826 NKTRP30414 1462 aaKnown RBP6.2□□□□□ -1.42
PMS1-202ENST00000374826 LRRC7Q96NW7 1537 aa6.2□□□□□ -1.42
PMS1-202ENST00000374826 PIK3C2GO75747 1445 aa6.19□□□□□ -1.42
PMS1-202ENST00000374826 B4E1Z4 1266 aa6.19□□□□□ -1.42
PMS1-202ENST00000374826 GRM7Q14831 915 aa6.19□□□□□ -1.42
PMS1-202ENST00000374826 PCOLCEQ15113 449 aa6.19□□□□□ -1.42
PMS1-202ENST00000374826 DDX53Q86TM3 631 aaKnown RBP6.19□□□□□ -1.42
PMS1-202ENST00000374826 SGMS1Q86VZ5 419 aa6.19□□□□□ -1.42
PMS1-202ENST00000374826 LDLRAD3Q86YD5 345 aa6.19□□□□□ -1.42
PMS1-202ENST00000374826 ASB15Q8WXK1 588 aa6.19□□□□□ -1.42
PMS1-202ENST00000374826 LARP4BQ92615 738 aaKnown RBP6.19□□□□□ -1.42
PMS1-202ENST00000374826 DLG3Q92796 817 aa6.19□□□□□ -1.42
PMS1-202ENST00000374826 BTBD2Q9BX70 525 aa6.19□□□□□ -1.42
PMS1-202ENST00000374826 OR10A2Q9H208 303 aa6.19□□□□□ -1.42
PMS1-202ENST00000374826 PIF1Q9H611 641 aa6.19□□□□□ -1.42
PMS1-202ENST00000374826 UCKL1Q9NWZ5 548 aa6.19□□□□□ -1.42
PMS1-202ENST00000374826 TMEM260Q9NX78 707 aa6.19□□□□□ -1.42
PMS1-202ENST00000374826 B3GALT1Q9Y5Z6 326 aa6.19□□□□□ -1.42
PMS1-202ENST00000374826 NRXN1Q9ULB1 1477 aa6.19□□□□□ -1.42
PMS1-202ENST00000374826 PTPRUQ92729 1446 aa6.18□□□□□ -1.42
PMS1-202ENST00000374826 IQSEC2Q5JU85 1478 aa6.18□□□□□ -1.42
PMS1-202ENST00000374826 M0R2C6 588 aa6.18□□□□□ -1.42
PMS1-202ENST00000374826 FOXP2O15409 715 aa6.18□□□□□ -1.42
PMS1-202ENST00000374826 OPA1O60313 960 aa6.18□□□□□ -1.42
PMS1-202ENST00000374826 MPIG6BO95866 241 aa6.18□□□□□ -1.42
PMS1-202ENST00000374826 ADH4P08319 380 aa6.18□□□□□ -1.42
PMS1-202ENST00000374826 MAKP20794 623 aa6.18□□□□□ -1.42
PMS1-202ENST00000374826 SDHAP31040 664 aa6.18□□□□□ -1.42
PMS1-202ENST00000374826 MRE11P49959 708 aa6.18□□□□□ -1.42
PMS1-202ENST00000374826 NANOS3P60323 173 aaKnown RBP6.18□□□□□ -1.42
PMS1-202ENST00000374826 IRF9Q00978 393 aa6.18□□□□□ -1.42
PMS1-202ENST00000374826 HHEXQ03014 270 aa6.18□□□□□ -1.42
PMS1-202ENST00000374826 TMEM132BQ14DG7 1078 aa6.18□□□□□ -1.42
PMS1-202ENST00000374826 KRTAP15-1Q3LI76 137 aa6.18□□□□□ -1.42
PMS1-202ENST00000374826 ZCCHC8Q6NZY4 707 aaKnown RBP6.18□□□□□ -1.42
PMS1-202ENST00000374826 OTOP1Q7RTM1 612 aa6.18□□□□□ -1.42
PMS1-202ENST00000374826 FILIP1Q7Z7B0 1213 aa6.18□□□□□ -1.42
PMS1-202ENST00000374826 ADGRE4PQ86SQ3 457 aa6.18□□□□□ -1.42
PMS1-202ENST00000374826 ZNF483Q8TF39 744 aaPredicted RBP6.18□□□□□ -1.42
PMS1-202ENST00000374826 GBP4Q96PP9 640 aa6.18□□□□□ -1.42
PMS1-202ENST00000374826 BOCQ9BWV1 1114 aa6.18□□□□□ -1.42
PMS1-202ENST00000374826 AMNQ9BXJ7 453 aa6.18□□□□□ -1.42
PMS1-202ENST00000374826 CEP72Q9P209 647 aa6.18□□□□□ -1.42
PMS1-202ENST00000374826 ASB1Q9Y576 335 aa6.18□□□□□ -1.42
PMS1-202ENST00000374826 FMN2Q9NZ56 1722 aa6.18□□□□□ -1.42
PMS1-202ENST00000374826 ADGRF5Q8IZF2 1346 aa6.18□□□□□ -1.42
PMS1-202ENST00000374826 ROBO1Q9Y6N7 1651 aa6.17□□□□□ -1.42
PMS1-202ENST00000374826 ITSN1Q15811 1721 aa6.17□□□□□ -1.42
PMS1-202ENST00000374826 PMS2P1A4D2B8 440 aa6.17□□□□□ -1.42
PMS1-202ENST00000374826 RASSF10A6NK89 507 aa6.17□□□□□ -1.42
PMS1-202ENST00000374826 PPP1R12AO14974 1030 aaPredicted RBP6.17□□□□□ -1.42
PMS1-202ENST00000374826 DNAJC8O75937 253 aaPredicted RBP6.17□□□□□ -1.42
PMS1-202ENST00000374826 GLRX3O76003 335 aaKnown RBP6.17□□□□□ -1.42
PMS1-202ENST00000374826 ASMTLO95671 621 aa6.17□□□□□ -1.42
PMS1-202ENST00000374826 ASLP04424 464 aa6.17□□□□□ -1.42
PMS1-202ENST00000374826 ECE1P42892 770 aa6.17□□□□□ -1.42
PMS1-202ENST00000374826 CD83Q01151 205 aa6.17□□□□□ -1.42
PMS1-202ENST00000374826 HGFACQ04756 655 aa6.17□□□□□ -1.42
PMS1-202ENST00000374826 LRSAM1Q6UWE0 723 aa6.17□□□□□ -1.42
PMS1-202ENST00000374826 OTOP2Q7RTS6 562 aa6.17□□□□□ -1.42
PMS1-202ENST00000374826 HIPK4Q8NE63 616 aa6.17□□□□□ -1.42
PMS1-202ENST00000374826 WDR48Q8TAF3 677 aa6.17□□□□□ -1.42
PMS1-202ENST00000374826 SIN3AQ96ST3 1273 aa6.17□□□□□ -1.42
PMS1-202ENST00000374826 SAMD15Q9P1V8 674 aa6.17□□□□□ -1.42
PMS1-202ENST00000374826 GIT1Q9Y2X7 761 aa6.17□□□□□ -1.42
PMS1-202ENST00000374826 TNPO3Q9Y5L0 923 aaKnown RBP6.17□□□□□ -1.42
PMS1-202ENST00000374826 ADGRB1O14514 1584 aa6.17□□□□□ -1.42
PMS1-202ENST00000374826 RPGRIP1LQ68CZ1 1315 aa6.17□□□□□ -1.42
PMS1-202ENST00000374826 METP08581 1390 aa6.17□□□□□ -1.42
PMS1-202ENST00000374826 PHLPP1O60346 1717 aa6.16□□□□□ -1.42
PMS1-202ENST00000374826 A0A0G2JNJ9 132 aa6.16□□□□□ -1.42
PMS1-202ENST00000374826 KRTAP23-1A1A580 65 aa6.16□□□□□ -1.42
PMS1-202ENST00000374826 PRAMEF22A3QJZ6 481 aa6.16□□□□□ -1.42
PMS1-202ENST00000374826 KRT37O76014 449 aa6.16□□□□□ -1.42
PMS1-202ENST00000374826 ZBTB48P10074 688 aaPredicted RBP6.16□□□□□ -1.42
PMS1-202ENST00000374826 MEOX1P50221 254 aa6.16□□□□□ -1.42
PMS1-202ENST00000374826 MECP2P51608 486 aaKnown RBP6.16□□□□□ -1.42
PMS1-202ENST00000374826 ZNF460Q14592 562 aa6.16□□□□□ -1.42
PMS1-202ENST00000374826 ARHGAP44Q17R89 818 aa6.16□□□□□ -1.42
PMS1-202ENST00000374826 KANK2Q63ZY3 851 aa6.16□□□□□ -1.42
PMS1-202ENST00000374826 SPTY2D1Q68D10 685 aaPredicted RBP6.16□□□□□ -1.42
PMS1-202ENST00000374826 ZNF627Q7L945 461 aa6.16□□□□□ -1.42
PMS1-202ENST00000374826 TMPRSS6Q8IU80 811 aa6.16□□□□□ -1.42
PMS1-202ENST00000374826 DNAJC10Q8IXB1 793 aa6.16□□□□□ -1.42
PMS1-202ENST00000374826 AGO3Q9H9G7 860 aaKnown RBP6.16□□□□□ -1.42
PMS1-202ENST00000374826 Q9UFV3 132 aa6.16□□□□□ -1.42
PMS1-202ENST00000374826 CATSPEREQ5SY80 951 aa6.15□□□□□ -1.42
PMS1-202ENST00000374826 TMEM200BQ69YZ2 307 aa6.15□□□□□ -1.42
PMS1-202ENST00000374826 CC2D1AQ6P1N0 951 aaPredicted RBP6.15□□□□□ -1.42
PMS1-202ENST00000374826 MRGPRGQ86SM5 289 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms