RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 PHF2O75151 1096 aa12.57□□□□□ -0.4
SMARCA1-201ENST00000371121 GFPT2O94808 682 aa12.57□□□□□ -0.4
SMARCA1-201ENST00000371121 CBX6O95503 412 aa12.57□□□□□ -0.4
SMARCA1-201ENST00000371121 H2AFZP0C0S5 128 aa12.57□□□□□ -0.4
SMARCA1-201ENST00000371121 USP4Q13107 963 aa12.57□□□□□ -0.4
SMARCA1-201ENST00000371121 HYIQ5T013 277 aa12.57□□□□□ -0.4
SMARCA1-201ENST00000371121 SOGA3Q5TF21 947 aa12.57□□□□□ -0.4
SMARCA1-201ENST00000371121 C12orf60Q5U649 245 aa12.57□□□□□ -0.4
SMARCA1-201ENST00000371121 USP17L2Q6R6M4 530 aa12.57□□□□□ -0.4
SMARCA1-201ENST00000371121 H2AFVQ71UI9 128 aa12.57□□□□□ -0.4
SMARCA1-201ENST00000371121 GATA6Q92908 595 aa12.57□□□□□ -0.4
SMARCA1-201ENST00000371121 TLE6Q9H808 572 aa12.57□□□□□ -0.4
SMARCA1-201ENST00000371121 ASTN1O14525 1302 aa12.57□□□□□ -0.4
SMARCA1-201ENST00000371121 KLRF2D3W0D1 207 aa12.56□□□□□ -0.4
SMARCA1-201ENST00000371121 H0Y3Z8 333 aa12.56□□□□□ -0.4
SMARCA1-201ENST00000371121 PPP1R11O60927 126 aaPredicted RBP12.56□□□□□ -0.4
SMARCA1-201ENST00000371121 CYP11B2P19099 503 aa12.56□□□□□ -0.4
SMARCA1-201ENST00000371121 ADCY1Q08828 1119 aa12.56□□□□□ -0.4
SMARCA1-201ENST00000371121 CYP1B1Q16678 543 aa12.56□□□□□ -0.4
SMARCA1-201ENST00000371121 KRT25Q7Z3Z0 450 aa12.56□□□□□ -0.4
SMARCA1-201ENST00000371121 LONP2Q86WA8 852 aa12.56□□□□□ -0.4
SMARCA1-201ENST00000371121 CCNJLQ8IV13 435 aa12.56□□□□□ -0.4
SMARCA1-201ENST00000371121 DLGAP2Q9P1A6 1054 aa12.56□□□□□ -0.4
SMARCA1-201ENST00000371121 CPSF2Q9P2I0 782 aaKnown RBP12.56□□□□□ -0.4
SMARCA1-201ENST00000371121 AMFRQ9UKV5 643 aa12.56□□□□□ -0.4
SMARCA1-201ENST00000371121 BAG3O95817 575 aa12.56□□□□□ -0.4
SMARCA1-201ENST00000371121 NAPAP54920 295 aa12.56□□□□□ -0.4
SMARCA1-201ENST00000371121 ANKRD42Q8N9B4 389 aa12.56□□□□□ -0.4
SMARCA1-201ENST00000371121 KIFAP3Q92845 792 aa12.56□□□□□ -0.4
SMARCA1-201ENST00000371121 PIGSQ96S52 555 aa12.56□□□□□ -0.4
SMARCA1-201ENST00000371121 SPZ1Q9BXG8 430 aa12.56□□□□□ -0.4
SMARCA1-201ENST00000371121 CCDC113Q9H0I3 377 aa12.56□□□□□ -0.4
SMARCA1-201ENST00000371121 EMILIN3Q9NT22 766 aa12.56□□□□□ -0.4
SMARCA1-201ENST00000371121 COL24A1Q17RW2 1714 aa12.56□□□□□ -0.4
SMARCA1-201ENST00000371121 ZMYM2Q9UBW7 1377 aa12.56□□□□□ -0.4
SMARCA1-201ENST00000371121 ACSL3O95573 720 aa12.56□□□□□ -0.4
SMARCA1-201ENST00000371121 NTSR2O95665 410 aa12.56□□□□□ -0.4
SMARCA1-201ENST00000371121 PYGMP11217 842 aa12.56□□□□□ -0.4
SMARCA1-201ENST00000371121 ABCB4P21439 1286 aa12.56□□□□□ -0.4
SMARCA1-201ENST00000371121 NR2F2P24468 414 aa12.56□□□□□ -0.4
SMARCA1-201ENST00000371121 YARSP54577 528 aaKnown RBP12.56□□□□□ -0.4
SMARCA1-201ENST00000371121 SLC12A3P55017 1021 aa12.56□□□□□ -0.4
SMARCA1-201ENST00000371121 ATP11AP98196 1134 aa12.56□□□□□ -0.4
SMARCA1-201ENST00000371121 GRIK5Q16478 980 aa12.56□□□□□ -0.4
SMARCA1-201ENST00000371121 DSTYKQ6XUX3 929 aa12.56□□□□□ -0.4
SMARCA1-201ENST00000371121 ERP27Q96DN0 273 aa12.56□□□□□ -0.4
SMARCA1-201ENST00000371121 TSG101Q99816 390 aa12.56□□□□□ -0.4
SMARCA1-201ENST00000371121 ARMCX3Q9UH62 379 aaPredicted RBP12.56□□□□□ -0.4
SMARCA1-201ENST00000371121 E7ENQ6 273 aa12.55□□□□□ -0.4
SMARCA1-201ENST00000371121 TRAFD1O14545 582 aaPredicted RBP12.55□□□□□ -0.4
SMARCA1-201ENST00000371121 ECE2O60344 883 aa12.55□□□□□ -0.4
SMARCA1-201ENST00000371121 EYA4O95677 639 aa12.55□□□□□ -0.4
SMARCA1-201ENST00000371121 TMEM253P0C7T8 217 aa12.55□□□□□ -0.4
SMARCA1-201ENST00000371121 CNGA1P29973 690 aa12.55□□□□□ -0.4
SMARCA1-201ENST00000371121 PSMC6P62333 389 aa12.55□□□□□ -0.4
SMARCA1-201ENST00000371121 MRPS35P82673 323 aaKnown RBP12.55□□□□□ -0.4
SMARCA1-201ENST00000371121 PRPF4BQ13523 1007 aaKnown RBP12.55□□□□□ -0.4
SMARCA1-201ENST00000371121 RFFLQ8WZ73 363 aa12.55□□□□□ -0.4
SMARCA1-201ENST00000371121 RBM41Q96IZ5 413 aaKnown RBP12.55□□□□□ -0.4
SMARCA1-201ENST00000371121 LBHD1Q9BQE6 289 aaPredicted RBP12.55□□□□□ -0.4
SMARCA1-201ENST00000371121 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.55□□□□□ -0.4
SMARCA1-201ENST00000371121 TRAF3IP3Q9Y228 551 aa12.55□□□□□ -0.4
SMARCA1-201ENST00000371121 TBC1D30Q9Y2I9 924 aa12.55□□□□□ -0.4
SMARCA1-201ENST00000371121 BZW2Q9Y6E2 419 aaKnown RBP12.55□□□□□ -0.4
SMARCA1-201ENST00000371121 PCNTO95613 3336 aa12.55□□□□□ -0.4
SMARCA1-201ENST00000371121 CLK2P49760 499 aaKnown RBP12.55□□□□□ -0.4
SMARCA1-201ENST00000371121 CCDC137Q6PK04 289 aaKnown RBP12.55□□□□□ -0.4
SMARCA1-201ENST00000371121 PTPN22Q9Y2R2 807 aa12.55□□□□□ -0.4
SMARCA1-201ENST00000371121 IRS2Q9Y4H2 1338 aa12.55□□□□□ -0.4
SMARCA1-201ENST00000371121 ALG6Q9Y672 507 aa12.55□□□□□ -0.4
SMARCA1-201ENST00000371121 FLOT1O75955 427 aa12.55□□□□□ -0.4
SMARCA1-201ENST00000371121 EDRF1Q3B7T1 1238 aa12.55□□□□□ -0.4
SMARCA1-201ENST00000371121 DENND1AQ8TEH3 1009 aa12.55□□□□□ -0.4
SMARCA1-201ENST00000371121 PRR11Q96HE9 360 aaPredicted RBP12.55□□□□□ -0.4
SMARCA1-201ENST00000371121 NUDCD1Q96RS6 583 aa12.55□□□□□ -0.4
SMARCA1-201ENST00000371121 ARPP21Q9UBL0 812 aaPredicted RBP12.55□□□□□ -0.4
SMARCA1-201ENST00000371121 ADGRA3Q8IWK6 1321 aa12.54□□□□□ -0.4
SMARCA1-201ENST00000371121 POTEB3A0JP26 581 aa12.54□□□□□ -0.4
SMARCA1-201ENST00000371121 POTECB2RU33 542 aa12.54□□□□□ -0.4
SMARCA1-201ENST00000371121 ERVV-1B6SEH8 477 aa12.54□□□□□ -0.4
SMARCA1-201ENST00000371121 POLGP54098 1239 aaPredicted RBP12.54□□□□□ -0.4
SMARCA1-201ENST00000371121 INHBCP55103 352 aa12.54□□□□□ -0.4
SMARCA1-201ENST00000371121 MXRA7P84157 204 aa12.54□□□□□ -0.4
SMARCA1-201ENST00000371121 POTEBQ6S5H4 581 aa12.54□□□□□ -0.4
SMARCA1-201ENST00000371121 FAM47EQ6ZV65 393 aa12.54□□□□□ -0.4
SMARCA1-201ENST00000371121 C10orf82Q8WW14 230 aa12.54□□□□□ -0.4
SMARCA1-201ENST00000371121 MAGEB18Q96M61 343 aa12.54□□□□□ -0.4
SMARCA1-201ENST00000371121 NSRP1Q9H0G5 558 aaKnown RBP12.54□□□□□ -0.4
SMARCA1-201ENST00000371121 KRT82Q9NSB4 513 aa12.54□□□□□ -0.4
SMARCA1-201ENST00000371121 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.54□□□□□ -0.42e-7■■■□□ 18.3
SMARCA1-201ENST00000371121 RGL1Q9NZL6 768 aa12.54□□□□□ -0.4
SMARCA1-201ENST00000371121 JAG2Q9Y219 1238 aa12.54□□□□□ -0.4
SMARCA1-201ENST00000371121 MAGEB2O15479 319 aa12.54□□□□□ -0.4
SMARCA1-201ENST00000371121 ASMTLO95671 621 aa12.54□□□□□ -0.4
SMARCA1-201ENST00000371121 LACTBP83111 547 aaPredicted RBP12.54□□□□□ -0.4
SMARCA1-201ENST00000371121 TXNRD3Q86VQ6 643 aa12.54□□□□□ -0.4
SMARCA1-201ENST00000371121 SYCE1Q8N0S2 351 aa12.54□□□□□ -0.4
SMARCA1-201ENST00000371121 ZNF276Q8N554 614 aa12.54□□□□□ -0.4
SMARCA1-201ENST00000371121 B4GALNT2Q8NHY0 566 aa12.54□□□□□ -0.4
SMARCA1-201ENST00000371121 COA7Q96BR5 231 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms