RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 ZBED3Q96IU2 234 aaPredicted RBP6.52□□□□□ -1.37
RNU4-4P-201ENST00000364588 R3HDMLQ9H3Y0 253 aa6.52□□□□□ -1.37
RNU4-4P-201ENST00000364588 AOX1Q06278 1338 aa6.51□□□□□ -1.37
RNU4-4P-201ENST00000364588 IL16Q14005 1332 aa6.51□□□□□ -1.37
RNU4-4P-201ENST00000364588 H7BY64 318 aa6.51□□□□□ -1.37
RNU4-4P-201ENST00000364588 CAPNS1P04632 268 aa6.51□□□□□ -1.37
RNU4-4P-201ENST00000364588 ASGR2P07307 311 aa6.51□□□□□ -1.37
RNU4-4P-201ENST00000364588 FGFR1P11362 822 aa6.51□□□□□ -1.37
RNU4-4P-201ENST00000364588 PMLP29590 882 aa6.51□□□□□ -1.37
RNU4-4P-201ENST00000364588 NCKAP1LP55160 1127 aa6.51□□□□□ -1.37
RNU4-4P-201ENST00000364588 CAP1Q01518 475 aa6.51□□□□□ -1.37
RNU4-4P-201ENST00000364588 SREBF2Q12772 1141 aa6.51□□□□□ -1.37
RNU4-4P-201ENST00000364588 RASGRF1Q13972 1273 aa6.51□□□□□ -1.37
RNU4-4P-201ENST00000364588 SF1Q15637 639 aaKnown RBP6.51□□□□□ -1.37
RNU4-4P-201ENST00000364588 CFAP100Q494V2 611 aa6.51□□□□□ -1.37
RNU4-4P-201ENST00000364588 FBLN7Q53RD9 439 aa6.51□□□□□ -1.37
RNU4-4P-201ENST00000364588 TAF7LQ5H9L4 462 aa6.51□□□□□ -1.37
RNU4-4P-201ENST00000364588 EPHA10Q5JZY3 1008 aa6.51□□□□□ -1.37
RNU4-4P-201ENST00000364588 LMBR1LQ6UX01 489 aa6.51□□□□□ -1.37
RNU4-4P-201ENST00000364588 TMEFF1Q8IYR6 380 aa6.51□□□□□ -1.37
RNU4-4P-201ENST00000364588 CPA5Q8WXQ8 436 aa6.51□□□□□ -1.37
RNU4-4P-201ENST00000364588 TRMT2BQ96GJ1 504 aaKnown RBP6.51□□□□□ -1.37
RNU4-4P-201ENST00000364588 CLMNQ96JQ2 1002 aa6.51□□□□□ -1.37
RNU4-4P-201ENST00000364588 KRTAP9-9Q9BYP9 154 aa6.51□□□□□ -1.37
RNU4-4P-201ENST00000364588 KRTAP9-4Q9BYQ2 154 aa6.51□□□□□ -1.37
RNU4-4P-201ENST00000364588 DEFB129Q9H1M3 183 aa6.51□□□□□ -1.37
RNU4-4P-201ENST00000364588 VEZTQ9HBM0 779 aa6.51□□□□□ -1.37
RNU4-4P-201ENST00000364588 SIRPGQ9P1W8 387 aa6.51□□□□□ -1.37
RNU4-4P-201ENST00000364588 SSC5DA1L4H1 1573 aa6.51□□□□□ -1.37
RNU4-4P-201ENST00000364588 COL1A1P02452 1464 aaPredicted RBP6.5□□□□□ -1.37
RNU4-4P-201ENST00000364588 TRAV20A0A0B4J274 112 aa6.5□□□□□ -1.37
RNU4-4P-201ENST00000364588 PDPK1O15530 556 aa6.5□□□□□ -1.37
RNU4-4P-201ENST00000364588 PPP1R11O60927 126 aaPredicted RBP6.5□□□□□ -1.37
RNU4-4P-201ENST00000364588 FPR2P25090 351 aa6.5□□□□□ -1.37
RNU4-4P-201ENST00000364588 GTF2F1P35269 517 aaKnown RBP eCLIP6.5□□□□□ -1.37
RNU4-4P-201ENST00000364588 BCL6P41182 706 aa6.5□□□□□ -1.37
RNU4-4P-201ENST00000364588 GRIA2P42262 883 aa6.5□□□□□ -1.37
RNU4-4P-201ENST00000364588 MMP14P50281 582 aa6.5□□□□□ -1.37
RNU4-4P-201ENST00000364588 RBM5P52756 815 aaKnown RBP eCLIP6.5□□□□□ -1.37
RNU4-4P-201ENST00000364588 PKN2Q16513 984 aaKnown RBP6.5□□□□□ -1.37
RNU4-4P-201ENST00000364588 CCDC57Q2TAC2 916 aa6.5□□□□□ -1.37
RNU4-4P-201ENST00000364588 BEND3Q5T5X7 828 aa6.5□□□□□ -1.37
RNU4-4P-201ENST00000364588 RSPO2Q6UXX9 243 aaPredicted RBP6.5□□□□□ -1.37
RNU4-4P-201ENST00000364588 LDHAL6AQ6ZMR3 332 aa6.5□□□□□ -1.37
RNU4-4P-201ENST00000364588 C15orf52Q6ZUT6 534 aaKnown RBP6.5□□□□□ -1.37
RNU4-4P-201ENST00000364588 DPH6Q7L8W6 267 aa6.5□□□□□ -1.37
RNU4-4P-201ENST00000364588 ZNF804AQ7Z570 1209 aa6.5□□□□□ -1.37
RNU4-4P-201ENST00000364588 B3GNT8Q7Z7M8 397 aa6.5□□□□□ -1.37
RNU4-4P-201ENST00000364588 RCBTB1Q8NDN9 531 aa6.5□□□□□ -1.37
RNU4-4P-201ENST00000364588 PRMT6Q96LA8 375 aaPredicted RBP6.5□□□□□ -1.37
RNU4-4P-201ENST00000364588 PWWP2AQ96N64 755 aa6.5□□□□□ -1.37
RNU4-4P-201ENST00000364588 RXFP1Q9HBX9 757 aa6.5□□□□□ -1.37
RNU4-4P-201ENST00000364588 EPB41L4AQ9HCS5 686 aaPredicted RBP6.5□□□□□ -1.37
RNU4-4P-201ENST00000364588 ARHGEF4Q9NR80 690 aa6.5□□□□□ -1.37
RNU4-4P-201ENST00000364588 CNNM1Q9NRU3 951 aa6.5□□□□□ -1.37
RNU4-4P-201ENST00000364588 GPR27Q9NS67 375 aa6.5□□□□□ -1.37
RNU4-4P-201ENST00000364588 RAPGEFL1Q9UHV5 662 aa6.5□□□□□ -1.37
RNU4-4P-201ENST00000364588 TMEFF2Q9UIK5 374 aaPredicted RBP6.5□□□□□ -1.37
RNU4-4P-201ENST00000364588 NPFFR2Q9Y5X5 522 aa6.5□□□□□ -1.37
RNU4-4P-201ENST00000364588 X6R8D5 127 aa6.5□□□□□ -1.37
RNU4-4P-201ENST00000364588 OTOFQ9HC10 1997 aa6.49□□□□□ -1.37
RNU4-4P-201ENST00000364588 MANSC4A6NHS7 340 aaPredicted RBP6.49□□□□□ -1.37
RNU4-4P-201ENST00000364588 GRM8O00222 908 aa6.49□□□□□ -1.37
RNU4-4P-201ENST00000364588 IL1R1P14778 569 aa6.49□□□□□ -1.37
RNU4-4P-201ENST00000364588 GYG1P46976 350 aa6.49□□□□□ -1.37
RNU4-4P-201ENST00000364588 LIMS1P48059 325 aa6.49□□□□□ -1.37
RNU4-4P-201ENST00000364588 LSAMPQ13449 338 aa6.49□□□□□ -1.37
RNU4-4P-201ENST00000364588 RASA3Q14644 834 aa6.49□□□□□ -1.37
RNU4-4P-201ENST00000364588 MTERF2Q49AM1 385 aa6.49□□□□□ -1.37
RNU4-4P-201ENST00000364588 FBXO46Q6PJ61 603 aaPredicted RBP6.49□□□□□ -1.37
RNU4-4P-201ENST00000364588 SLC4A10Q6U841 1118 aa6.49□□□□□ -1.37
RNU4-4P-201ENST00000364588 ETV3LQ6ZN32 361 aa6.49□□□□□ -1.37
RNU4-4P-201ENST00000364588 CEP68Q76N32 757 aa6.49□□□□□ -1.37
RNU4-4P-201ENST00000364588 WDR63Q8IWG1 891 aa6.49□□□□□ -1.37
RNU4-4P-201ENST00000364588 WNK4Q96J92 1243 aa6.49□□□□□ -1.37
RNU4-4P-201ENST00000364588 CHAMP1Q96JM3 812 aa6.49□□□□□ -1.37
RNU4-4P-201ENST00000364588 CCDC113Q9H0I3 377 aa6.49□□□□□ -1.37
RNU4-4P-201ENST00000364588 EPB41L1Q9H4G0 881 aa6.49□□□□□ -1.37
RNU4-4P-201ENST00000364588 PCDH18Q9HCL0 1135 aa6.49□□□□□ -1.37
RNU4-4P-201ENST00000364588 C9orf78Q9NZ63 289 aaPredicted RBP6.49□□□□□ -1.37
RNU4-4P-201ENST00000364588 TRIM17Q9Y577 477 aa6.49□□□□□ -1.37
RNU4-4P-201ENST00000364588 PCDHA2Q9Y5H9 948 aa6.49□□□□□ -1.37
RNU4-4P-201ENST00000364588 PMF1-BGLAPU3KQ54 211 aa6.49□□□□□ -1.37
RNU4-4P-201ENST00000364588 PDE4DIPQ5VU43 2346 aa6.49□□□□□ -1.37
RNU4-4P-201ENST00000364588 LAMB1P07942 1786 aa6.49□□□□□ -1.37
RNU4-4P-201ENST00000364588 ARAP2Q8WZ64 1704 aa6.48□□□□□ -1.37
RNU4-4P-201ENST00000364588 DLX3O60479 287 aa6.48□□□□□ -1.37
RNU4-4P-201ENST00000364588 FKBP1AP62942 108 aaKnown RBP6.48□□□□□ -1.37
RNU4-4P-201ENST00000364588 SUPT20HL1Q3ZLR7 823 aa6.48□□□□□ -1.37
RNU4-4P-201ENST00000364588 MFSD14BQ5SR56 506 aa6.48□□□□□ -1.37
RNU4-4P-201ENST00000364588 DENND5AQ6IQ26 1287 aa6.48□□□□□ -1.37
RNU4-4P-201ENST00000364588 USP53Q70EK8 1073 aa6.48□□□□□ -1.37
RNU4-4P-201ENST00000364588 ZC3H18Q86VM9 953 aaKnown RBP6.48□□□□□ -1.37
RNU4-4P-201ENST00000364588 PANK1Q8TE04 598 aa6.48□□□□□ -1.37
RNU4-4P-201ENST00000364588 SUCLG2Q96I99 432 aa6.48□□□□□ -1.37
RNU4-4P-201ENST00000364588 ZFYVE21Q9BQ24 234 aa6.48□□□□□ -1.37
RNU4-4P-201ENST00000364588 PHF20Q9BVI0 1012 aa6.48□□□□□ -1.37
RNU4-4P-201ENST00000364588 PUS3Q9BZE2 481 aaKnown RBP6.48□□□□□ -1.37
RNU4-4P-201ENST00000364588 TDRD3Q9H7E2 651 aaKnown RBP6.48□□□□□ -1.37
RNU4-4P-201ENST00000364588 CLDND1Q9NY35 253 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms