RNA–Protein interactions for RNA: ENST00000323926.10

FN1-201, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-201ENST00000323926 KLHDC4Q8TBB5 520 aa13.39□□□□□ -0.27
FN1-201ENST00000323926 URB1O60287 2271 aaKnown RBP13.39□□□□□ -0.27
FN1-201ENST00000323926 CFAP69A5D8W1 941 aa13.39□□□□□ -0.27
FN1-201ENST00000323926 NCKAP1LP55160 1127 aa13.39□□□□□ -0.27
FN1-201ENST00000323926 RBL2Q08999 1139 aa13.39□□□□□ -0.27
FN1-201ENST00000323926 MAPK8IP2Q13387 824 aaPredicted RBP13.39□□□□□ -0.27
FN1-201ENST00000323926 STAMBPL1Q96FJ0 436 aa13.39□□□□□ -0.27
FN1-201ENST00000323926 BFARQ9NZS9 450 aa13.39□□□□□ -0.27
FN1-201ENST00000323926 SDC4P31431 198 aa13.39□□□□□ -0.27
FN1-201ENST00000323926 KNOP1Q1ED39 458 aaKnown RBP13.39□□□□□ -0.27
FN1-201ENST00000323926 FAF2Q96CS3 445 aa13.39□□□□□ -0.27
FN1-201ENST00000323926 NAF1Q96HR8 494 aaKnown RBP13.39□□□□□ -0.27
FN1-201ENST00000323926 DPH5Q9H2P9 285 aa13.39□□□□□ -0.27
FN1-201ENST00000323926 MMS22LQ6ZRQ5 1243 aa13.39□□□□□ -0.27
FN1-201ENST00000323926 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.39□□□□□ -0.272e-44■■■■□ 22.2
FN1-201ENST00000323926 ANAPC7Q9UJX3 599 aa13.39□□□□□ -0.27
FN1-201ENST00000323926 ALDH1A1P00352 501 aa13.39□□□□□ -0.27
FN1-201ENST00000323926 EFTUD2Q15029 972 aaKnown RBP eCLIP13.39□□□□□ -0.272e-8■□□□□ 11.3
FN1-201ENST00000323926 ZNF677Q86XU0 584 aa13.39□□□□□ -0.27
FN1-201ENST00000323926 FAM133AQ8N9E0 248 aa13.39□□□□□ -0.27
FN1-201ENST00000323926 C17orf75Q9HAS0 396 aa13.39□□□□□ -0.27
FN1-201ENST00000323926 ABHD10Q9NUJ1 306 aa13.39□□□□□ -0.27
FN1-201ENST00000323926 APOA1P02647 267 aa13.38□□□□□ -0.27
FN1-201ENST00000323926 NR3C1P04150 777 aa13.38□□□□□ -0.27
FN1-201ENST00000323926 FCER1AP12319 257 aa13.38□□□□□ -0.27
FN1-201ENST00000323926 NPEPPSP55786 919 aa13.38□□□□□ -0.27
FN1-201ENST00000323926 KRR1Q13601 381 aaKnown RBP13.38□□□□□ -0.27
FN1-201ENST00000323926 MAPRE1Q15691 268 aaKnown RBP13.38□□□□□ -0.27
FN1-201ENST00000323926 KCTD1Q719H9 257 aa13.38□□□□□ -0.27
FN1-201ENST00000323926 ULK4Q96C45 1275 aa13.38□□□□□ -0.27
FN1-201ENST00000323926 PLEKHA5Q9HAU0 1116 aa13.38□□□□□ -0.27
FN1-201ENST00000323926 RASA4BC9J798 803 aa13.38□□□□□ -0.27
FN1-201ENST00000323926 RASA4O43374 803 aa13.38□□□□□ -0.27
FN1-201ENST00000323926 MFAP3LO75121 409 aa13.38□□□□□ -0.27
FN1-201ENST00000323926 MMEP08473 750 aa13.38□□□□□ -0.27
FN1-201ENST00000323926 BRAFP15056 766 aa13.38□□□□□ -0.27
FN1-201ENST00000323926 IL10P22301 178 aa13.38□□□□□ -0.27
FN1-201ENST00000323926 GPC3P51654 580 aa13.38□□□□□ -0.27
FN1-201ENST00000323926 PREPLQ4J6C6 727 aaPredicted RBP13.38□□□□□ -0.27
FN1-201ENST00000323926 UVRAGQ9P2Y5 699 aa13.38□□□□□ -0.27
FN1-201ENST00000323926 H0Y626 953 aa13.38□□□□□ -0.27
FN1-201ENST00000323926 TRIM16O95361 564 aa13.38□□□□□ -0.27
FN1-201ENST00000323926 KRT27Q7Z3Y8 459 aa13.38□□□□□ -0.27
FN1-201ENST00000323926 KRCC1Q9NPI7 259 aaPredicted RBP13.38□□□□□ -0.27
FN1-201ENST00000323926 BARHL2Q9NY43 387 aa13.38□□□□□ -0.27
FN1-201ENST00000323926 HSPA1AP0DMV8 641 aaKnown RBP13.38□□□□□ -0.27
FN1-201ENST00000323926 HSPA1BP0DMV9 641 aaKnown RBP13.38□□□□□ -0.27
FN1-201ENST00000323926 EPC1Q9H2F5 836 aa13.38□□□□□ -0.27
FN1-201ENST00000323926 HACD3Q9P035 362 aa13.38□□□□□ -0.27
FN1-201ENST00000323926 PIM2Q9P1W9 311 aa13.38□□□□□ -0.27
FN1-201ENST00000323926 ACADSBP45954 432 aa13.38□□□□□ -0.27
FN1-201ENST00000323926 NLRP11P59045 1033 aaKnown RBP13.38□□□□□ -0.27
FN1-201ENST00000323926 CATSPER4Q7RTX7 472 aa13.38□□□□□ -0.27
FN1-201ENST00000323926 NLRP4Q96MN2 994 aa13.38□□□□□ -0.27
FN1-201ENST00000323926 SLIT1O75093 1534 aa13.38□□□□□ -0.27
FN1-201ENST00000323926 USP17L5A8MUK1 530 aa13.38□□□□□ -0.27
FN1-201ENST00000323926 CD4P01730 458 aa13.38□□□□□ -0.27
FN1-201ENST00000323926 PTH1RQ03431 593 aa13.38□□□□□ -0.27
FN1-201ENST00000323926 OTUD7AQ8TE49 926 aaPredicted RBP13.38□□□□□ -0.27
FN1-201ENST00000323926 CRB1P82279 1406 aa13.38□□□□□ -0.27
FN1-201ENST00000323926 E2F6O75461 281 aa13.38□□□□□ -0.27
FN1-201ENST00000323926 ANXA11P50995 505 aaKnown RBP13.38□□□□□ -0.27
FN1-201ENST00000323926 VIPAS39Q9H9C1 493 aa13.38□□□□□ -0.27
FN1-201ENST00000323926 STKLD1Q8NE28 680 aa13.37□□□□□ -0.27
FN1-201ENST00000323926 DTNBP1Q96EV8 351 aa13.37□□□□□ -0.27
FN1-201ENST00000323926 TAF1DQ9H5J8 278 aaPredicted RBP13.37□□□□□ -0.27
FN1-201ENST00000323926 IFT172Q9UG01 1749 aa13.37□□□□□ -0.27
FN1-201ENST00000323926 TMPRSS15P98073 1019 aa13.37□□□□□ -0.27
FN1-201ENST00000323926 CDK5RAP1Q96SZ6 601 aaKnown RBP13.37□□□□□ -0.27
FN1-201ENST00000323926 SEC24BO95487 1268 aa13.37□□□□□ -0.27
FN1-201ENST00000323926 EIF4A3P38919 411 aaKnown RBP13.37□□□□□ -0.27
FN1-201ENST00000323926 ZNF568Q3ZCX4 644 aa13.37□□□□□ -0.27
FN1-201ENST00000323926 MRPL48Q96GC5 212 aaKnown RBP13.37□□□□□ -0.27
FN1-201ENST00000323926 KIDINS220Q9ULH0 1771 aa13.37□□□□□ -0.27
FN1-201ENST00000323926 PAX3P23760 479 aa13.37□□□□□ -0.27
FN1-201ENST00000323926 SCNN1DP51172 638 aa13.37□□□□□ -0.27
FN1-201ENST00000323926 STAT4Q14765 748 aa13.37□□□□□ -0.27
FN1-201ENST00000323926 CYP4F22Q6NT55 531 aa13.37□□□□□ -0.27
FN1-201ENST00000323926 PIK3C2BO00750 1634 aa13.37□□□□□ -0.27
FN1-201ENST00000323926 TRIP11Q15643 1979 aa13.37□□□□□ -0.27
FN1-201ENST00000323926 FAM208AQ9UK61 1670 aaKnown RBP13.37□□□□□ -0.27
FN1-201ENST00000323926 PSMC5P62195 406 aa13.37□□□□□ -0.27
FN1-201ENST00000323926 TERB1Q8NA31 727 aa13.37□□□□□ -0.27
FN1-201ENST00000323926 TBX3O15119 743 aa13.37□□□□□ -0.27
FN1-201ENST00000323926 NCF2P19878 526 aaPredicted RBP13.37□□□□□ -0.27
FN1-201ENST00000323926 CDC27P30260 824 aa13.37□□□□□ -0.27
FN1-201ENST00000323926 TSGA10IPQ3SY00 556 aa13.37□□□□□ -0.27
FN1-201ENST00000323926 TWF2Q6IBS0 349 aaKnown RBP13.37□□□□□ -0.27
FN1-201ENST00000323926 MYLK4Q86YV6 388 aaPredicted RBP13.37□□□□□ -0.27
FN1-201ENST00000323926 CEP95Q96GE4 821 aa13.37□□□□□ -0.27
FN1-201ENST00000323926 PAGE5Q96GU1 130 aa13.37□□□□□ -0.27
FN1-201ENST00000323926 KRT82Q9NSB4 513 aa13.37□□□□□ -0.27
FN1-201ENST00000323926 CTIFO43310 598 aaKnown RBP13.37□□□□□ -0.27
FN1-201ENST00000323926 OCM2P0CE71 109 aa13.37□□□□□ -0.27
FN1-201ENST00000323926 OCMP0CE72 109 aaPredicted RBP13.37□□□□□ -0.27
FN1-201ENST00000323926 C4BPBP20851 252 aa13.37□□□□□ -0.27
FN1-201ENST00000323926 CDK17Q00537 523 aa13.37□□□□□ -0.27
FN1-201ENST00000323926 RASGRF1Q13972 1273 aa13.37□□□□□ -0.27
FN1-201ENST00000323926 UNC5CLQ8IV45 518 aa13.37□□□□□ -0.27
FN1-201ENST00000323926 CREB3O43889 395 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms