RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 NRG3P56975 720 aa12.79□□□□□ -0.36
PCF11-201ENST00000298281 CUL3Q13618 768 aa12.79□□□□□ -0.36
PCF11-201ENST00000298281 ARHGEF25Q86VW2 580 aa12.79□□□□□ -0.36
PCF11-201ENST00000298281 WDR75Q8IWA0 830 aaKnown RBP12.79□□□□□ -0.36
PCF11-201ENST00000298281 DDIASQ8IXT1 998 aa12.79□□□□□ -0.36
PCF11-201ENST00000298281 TTC39CQ8N584 583 aa12.79□□□□□ -0.36
PCF11-201ENST00000298281 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.79□□□□□ -0.36
PCF11-201ENST00000298281 MYCBPQ99417 103 aaPredicted RBP12.79□□□□□ -0.36
PCF11-201ENST00000298281 BBS2Q9BXC9 721 aa12.79□□□□□ -0.36
PCF11-201ENST00000298281 LSG1Q9H089 658 aaKnown RBP12.79□□□□□ -0.36
PCF11-201ENST00000298281 ZWILCHQ9H900 591 aa12.79□□□□□ -0.36
PCF11-201ENST00000298281 C11orf88Q6PI97 169 aa12.79□□□□□ -0.36
PCF11-201ENST00000298281 SRPRBQ9Y5M8 271 aaKnown RBP12.79□□□□□ -0.36
PCF11-201ENST00000298281 KDM5DQ9BY66 1539 aa12.79□□□□□ -0.36
PCF11-201ENST00000298281 ENC1O14682 589 aa12.79□□□□□ -0.36
PCF11-201ENST00000298281 ADRA2BP18089 450 aa12.79□□□□□ -0.36
PCF11-201ENST00000298281 ADD2P35612 726 aa12.79□□□□□ -0.36
PCF11-201ENST00000298281 JAK3P52333 1124 aa12.79□□□□□ -0.36
PCF11-201ENST00000298281 RWDD2BP57060 319 aa12.79□□□□□ -0.36
PCF11-201ENST00000298281 CAV1Q03135 178 aa12.79□□□□□ -0.36
PCF11-201ENST00000298281 VN1R5Q7Z5H4 357 aa12.79□□□□□ -0.36
PCF11-201ENST00000298281 PLD3Q8IV08 490 aa12.79□□□□□ -0.36
PCF11-201ENST00000298281 IL17REQ8NFR9 667 aa12.79□□□□□ -0.36
PCF11-201ENST00000298281 FAF2Q96CS3 445 aa12.79□□□□□ -0.36
PCF11-201ENST00000298281 TOPORSQ9NS56 1045 aaPredicted RBP12.79□□□□□ -0.36
PCF11-201ENST00000298281 CYP19A1P11511 503 aaPredicted RBP12.79□□□□□ -0.36
PCF11-201ENST00000298281 HSD3B2P26439 372 aa12.79□□□□□ -0.36
PCF11-201ENST00000298281 EMBQ6PCB8 327 aa12.79□□□□□ -0.36
PCF11-201ENST00000298281 SH3GLB2Q9NR46 395 aa12.79□□□□□ -0.36
PCF11-201ENST00000298281 KAT6AQ92794 2004 aa12.79□□□□□ -0.36
PCF11-201ENST00000298281 MIF4GDA9UHW6 222 aaKnown RBP12.79□□□□□ -0.36
PCF11-201ENST00000298281 GRK2P25098 689 aa12.79□□□□□ -0.36
PCF11-201ENST00000298281 LIFRP42702 1097 aa12.79□□□□□ -0.36
PCF11-201ENST00000298281 TSPY1Q01534 308 aa12.79□□□□□ -0.36
PCF11-201ENST00000298281 CBFBQ13951 182 aa12.79□□□□□ -0.36
PCF11-201ENST00000298281 IYDQ6PHW0 289 aa12.79□□□□□ -0.36
PCF11-201ENST00000298281 BTNL9Q6UXG8 535 aa12.79□□□□□ -0.36
PCF11-201ENST00000298281 SPICE1Q8N0Z3 855 aa12.79□□□□□ -0.36
PCF11-201ENST00000298281 MCPH1Q8NEM0 835 aa12.79□□□□□ -0.36
PCF11-201ENST00000298281 RBM41Q96IZ5 413 aaKnown RBP12.79□□□□□ -0.36
PCF11-201ENST00000298281 SYNGAP1Q96PV0 1343 aa12.79□□□□□ -0.36
PCF11-201ENST00000298281 SPAG7O75391 227 aa12.78□□□□□ -0.36
PCF11-201ENST00000298281 ATP5HO75947 161 aa12.78□□□□□ -0.36
PCF11-201ENST00000298281 PLA2G4BP0C869 781 aa12.78□□□□□ -0.36
PCF11-201ENST00000298281 ALDH6A1Q02252 535 aaKnown RBP12.78□□□□□ -0.36
PCF11-201ENST00000298281 TFDP2Q14188 446 aa12.78□□□□□ -0.36
PCF11-201ENST00000298281 RGS9BPQ6ZS82 235 aa12.78□□□□□ -0.36
PCF11-201ENST00000298281 LUZP2Q86TE4 346 aa12.78□□□□□ -0.36
PCF11-201ENST00000298281 PNMA6FA0A0J9YX94 578 aa12.78□□□□□ -0.36
PCF11-201ENST00000298281 ERVV-1B6SEH8 477 aa12.78□□□□□ -0.36
PCF11-201ENST00000298281 GFPT2O94808 682 aa12.78□□□□□ -0.36
PCF11-201ENST00000298281 CRKLP46109 303 aaKnown RBP12.78□□□□□ -0.36
PCF11-201ENST00000298281 DR1Q01658 176 aa12.78□□□□□ -0.36
PCF11-201ENST00000298281 TNFAIP2Q03169 654 aa12.78□□□□□ -0.36
PCF11-201ENST00000298281 RBL2Q08999 1139 aa12.78□□□□□ -0.36
PCF11-201ENST00000298281 TEDDM1Q5T9Z0 273 aa12.78□□□□□ -0.36
PCF11-201ENST00000298281 ERICH1Q86X53 443 aa12.78□□□□□ -0.36
PCF11-201ENST00000298281 COMMD2Q86X83 199 aa12.78□□□□□ -0.36
PCF11-201ENST00000298281 KLHL31Q9H511 634 aa12.78□□□□□ -0.36
PCF11-201ENST00000298281 RCOR1Q9UKL0 485 aa12.78□□□□□ -0.36
PCF11-201ENST00000298281 AP3B2Q13367 1082 aa12.78□□□□□ -0.36
PCF11-201ENST00000298281 KCTD1Q719H9 257 aa12.78□□□□□ -0.36
PCF11-201ENST00000298281 ZMYND12Q9H0C1 365 aa12.78□□□□□ -0.36
PCF11-201ENST00000298281 EPN3Q9H201 632 aa12.78□□□□□ -0.36
PCF11-201ENST00000298281 ADNPQ9H2P0 1102 aa12.78□□□□□ -0.36
PCF11-201ENST00000298281 LZTS1Q9Y250 596 aa12.78□□□□□ -0.36
PCF11-201ENST00000298281 PEG3Q9GZU2 1588 aa12.78□□□□□ -0.36
PCF11-201ENST00000298281 ZNF197O14709 1029 aa12.78□□□□□ -0.36
PCF11-201ENST00000298281 KPNA1P52294 538 aaPredicted RBP12.78□□□□□ -0.36
PCF11-201ENST00000298281 SNX30Q5VWJ9 437 aa12.78□□□□□ -0.36
PCF11-201ENST00000298281 POTEEQ6S8J3 1075 aa12.78□□□□□ -0.36
PCF11-201ENST00000298281 OR6B3Q8NGW1 331 aa12.78□□□□□ -0.36
PCF11-201ENST00000298281 WDR62O43379 1518 aa12.78□□□□□ -0.36
PCF11-201ENST00000298281 PRR23AA6NEV1 266 aa12.78□□□□□ -0.36
PCF11-201ENST00000298281 PWP1Q13610 501 aa12.78□□□□□ -0.36
PCF11-201ENST00000298281 USP39Q53GS9 565 aaKnown RBP12.78□□□□□ -0.36
PCF11-201ENST00000298281 USPL1Q5W0Q7 1092 aa12.78□□□□□ -0.36
PCF11-201ENST00000298281 SCUBE2Q9NQ36 999 aa12.78□□□□□ -0.36
PCF11-201ENST00000298281 ZC3H4Q9UPT8 1303 aaKnown RBP12.78□□□□□ -0.36
PCF11-201ENST00000298281 SNTNA6NMZ2 147 aa12.78□□□□□ -0.36
PCF11-201ENST00000298281 BIRC5O15392 142 aa12.78□□□□□ -0.36
PCF11-201ENST00000298281 ASNSP08243 561 aa12.78□□□□□ -0.36
PCF11-201ENST00000298281 SMARCA1P28370 1054 aa12.78□□□□□ -0.36
PCF11-201ENST00000298281 FAM133AQ8N9E0 248 aa12.78□□□□□ -0.36
PCF11-201ENST00000298281 FBXO40Q9UH90 709 aa12.78□□□□□ -0.36
PCF11-201ENST00000298281 ABCC2Q92887 1545 aa12.78□□□□□ -0.36
PCF11-201ENST00000298281 KRT38O76015 456 aa12.77□□□□□ -0.36
PCF11-201ENST00000298281 S100A5P33763 92 aa12.77□□□□□ -0.36
PCF11-201ENST00000298281 ST8SIA6P61647 398 aa12.77□□□□□ -0.36
PCF11-201ENST00000298281 ICE2Q659A1 982 aa12.77□□□□□ -0.36
PCF11-201ENST00000298281 UNC45BQ8IWX7 931 aa12.77□□□□□ -0.36
PCF11-201ENST00000298281 POMGNT2Q8NAT1 580 aa12.77□□□□□ -0.36
PCF11-201ENST00000298281 GINS4Q9BRT9 223 aa12.77□□□□□ -0.36
PCF11-201ENST00000298281 MCM8Q9UJA3 840 aa12.77□□□□□ -0.36
PCF11-201ENST00000298281 PLEKHG1Q9ULL1 1385 aa12.77□□□□□ -0.36
PCF11-201ENST00000298281 SUPT3HO75486 399 aa12.77□□□□□ -0.36
PCF11-201ENST00000298281 NCKAP1LP55160 1127 aa12.77□□□□□ -0.36
PCF11-201ENST00000298281 MTERF2Q49AM1 385 aa12.77□□□□□ -0.36
PCF11-201ENST00000298281 CENPPQ6IPU0 288 aa12.77□□□□□ -0.36
PCF11-201ENST00000298281 ABCA5Q8WWZ7 1642 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms