RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 CACNB1Q02641 598 aaPredicted RBP19.03■□□□□ 0.64
CDKN1B-201ENST00000228872 GRIPAP1Q4V328 841 aa19.03■□□□□ 0.64
CDKN1B-201ENST00000228872 VSTM1Q6UX27 236 aa19.03■□□□□ 0.64
CDKN1B-201ENST00000228872 PPP4R3CPQ6ZMV5 832 aa19.03■□□□□ 0.64
CDKN1B-201ENST00000228872 PODNQ7Z5L7 613 aa19.03■□□□□ 0.64
CDKN1B-201ENST00000228872 ANKLE1Q8NAG6 615 aa19.03■□□□□ 0.64
CDKN1B-201ENST00000228872 OLIG1Q8TAK6 271 aa19.03■□□□□ 0.64
CDKN1B-201ENST00000228872 STX8Q9UNK0 236 aa19.03■□□□□ 0.64
CDKN1B-201ENST00000228872 PHF2O75151 1096 aa19.03■□□□□ 0.64
CDKN1B-201ENST00000228872 TSPY3P0CV98 308 aa19.03■□□□□ 0.64
CDKN1B-201ENST00000228872 TSPY8P0CW00 308 aa19.03■□□□□ 0.64
CDKN1B-201ENST00000228872 CREB1P16220 341 aa19.03■□□□□ 0.64
CDKN1B-201ENST00000228872 PAPOLAP51003 745 aaKnown RBP19.03■□□□□ 0.64
CDKN1B-201ENST00000228872 MGAT5Q09328 741 aa19.03■□□□□ 0.64
CDKN1B-201ENST00000228872 SNX1Q13596 522 aa19.03■□□□□ 0.64
CDKN1B-201ENST00000228872 EPHA7Q15375 998 aa19.03■□□□□ 0.64
CDKN1B-201ENST00000228872 HERC4Q5GLZ8 1057 aaPredicted RBP19.03■□□□□ 0.64
CDKN1B-201ENST00000228872 OTUD6AQ7L8S5 288 aa19.03■□□□□ 0.64
CDKN1B-201ENST00000228872 MFN1Q8IWA4 741 aa19.03■□□□□ 0.64
CDKN1B-201ENST00000228872 CKAP2Q8WWK9 683 aa19.03■□□□□ 0.64
CDKN1B-201ENST00000228872 RNPEPL1Q9HAU8 725 aa19.03■□□□□ 0.64
CDKN1B-201ENST00000228872 MKNK2Q9HBH9 465 aa19.03■□□□□ 0.64
CDKN1B-201ENST00000228872 PARP2Q9UGN5 583 aa19.03■□□□□ 0.64
CDKN1B-201ENST00000228872 ARMCX3Q9UH62 379 aaPredicted RBP19.03■□□□□ 0.64
CDKN1B-201ENST00000228872 PSME4Q14997 1843 aa19.02■□□□□ 0.64
CDKN1B-201ENST00000228872 NPHP3-ACAD11A0A0J9YXS1 232 aa19.02■□□□□ 0.64
CDKN1B-201ENST00000228872 UNC5CO95185 931 aa19.02■□□□□ 0.64
CDKN1B-201ENST00000228872 GNAT1P11488 350 aa19.02■□□□□ 0.64
CDKN1B-201ENST00000228872 RARGP13631 454 aa19.02■□□□□ 0.64
CDKN1B-201ENST00000228872 RPS6KA3P51812 740 aa19.02■□□□□ 0.64
CDKN1B-201ENST00000228872 GNPTABQ3T906 1256 aa19.02■□□□□ 0.64
CDKN1B-201ENST00000228872 GJB7Q6PEY0 223 aa19.02■□□□□ 0.64
CDKN1B-201ENST00000228872 FRMD5Q7Z6J6 570 aa19.02■□□□□ 0.64
CDKN1B-201ENST00000228872 SLC30A5Q8TAD4 765 aa19.02■□□□□ 0.64
CDKN1B-201ENST00000228872 ALG3Q92685 438 aa19.02■□□□□ 0.64
CDKN1B-201ENST00000228872 ROPN1BQ9BZX4 212 aaPredicted RBP19.02■□□□□ 0.64
CDKN1B-201ENST00000228872 ROPN1Q9HAT0 212 aaPredicted RBP19.02■□□□□ 0.64
CDKN1B-201ENST00000228872 ETNK1Q9HBU6 452 aa19.02■□□□□ 0.64
CDKN1B-201ENST00000228872 MLXIPLQ9NP71 852 aa19.02■□□□□ 0.64
CDKN1B-201ENST00000228872 PAPOLBQ9NRJ5 636 aaKnown RBP19.02■□□□□ 0.64
CDKN1B-201ENST00000228872 ROBO3Q96MS0 1386 aa19.02■□□□□ 0.64
CDKN1B-201ENST00000228872 HGSO14964 777 aaPredicted RBP19.02■□□□□ 0.63
CDKN1B-201ENST00000228872 TMEM253P0C7T8 217 aa19.02■□□□□ 0.63
CDKN1B-201ENST00000228872 VCAM1P19320 739 aa19.02■□□□□ 0.63
CDKN1B-201ENST00000228872 TRAF1Q13077 416 aa19.02■□□□□ 0.63
CDKN1B-201ENST00000228872 DOK7Q18PE1 504 aa19.02■□□□□ 0.63
CDKN1B-201ENST00000228872 RNF43Q68DV7 783 aa19.02■□□□□ 0.63
CDKN1B-201ENST00000228872 CGB2Q6NT52 195 aa19.02■□□□□ 0.63
CDKN1B-201ENST00000228872 ANKRD42Q8N9B4 389 aa19.02■□□□□ 0.63
CDKN1B-201ENST00000228872 FBF1Q8TES7 1133 aa19.02■□□□□ 0.63
CDKN1B-201ENST00000228872 ARHGEF2Q92974 986 aaKnown RBP19.02■□□□□ 0.63
CDKN1B-201ENST00000228872 SEC63Q9UGP8 760 aaKnown RBP19.02■□□□□ 0.63
CDKN1B-201ENST00000228872 ZMYND8Q9ULU4 1186 aaPredicted RBP19.02■□□□□ 0.63
CDKN1B-201ENST00000228872 PCDHA3Q9Y5H8 950 aa19.02■□□□□ 0.63
CDKN1B-201ENST00000228872 SCN9AQ15858 1988 aa19.02■□□□□ 0.63
CDKN1B-201ENST00000228872 LRRD1A4D1F6 860 aa19.01■□□□□ 0.63
CDKN1B-201ENST00000228872 SPDYE5A6NIY4 337 aa19.01■□□□□ 0.63
CDKN1B-201ENST00000228872 ABLIM1O14639 778 aa19.01■□□□□ 0.63
CDKN1B-201ENST00000228872 GFPT2O94808 682 aa19.01■□□□□ 0.63
CDKN1B-201ENST00000228872 BTDP43251 543 aa19.01■□□□□ 0.63
CDKN1B-201ENST00000228872 TUBP50607 506 aa19.01■□□□□ 0.63
CDKN1B-201ENST00000228872 AADACL2Q6P093 401 aa19.01■□□□□ 0.63
CDKN1B-201ENST00000228872 VAT1LQ9HCJ6 419 aa19.01■□□□□ 0.63
CDKN1B-201ENST00000228872 ESYT2A0FGR8 921 aa19.01■□□□□ 0.63
CDKN1B-201ENST00000228872 PEX11AO75192 247 aa19.01■□□□□ 0.63
CDKN1B-201ENST00000228872 SMIM24O75264 130 aa19.01■□□□□ 0.63
CDKN1B-201ENST00000228872 PLCG2P16885 1265 aa19.01■□□□□ 0.63
CDKN1B-201ENST00000228872 CALB2P22676 271 aa19.01■□□□□ 0.63
CDKN1B-201ENST00000228872 CHRNA3P32297 505 aa19.01■□□□□ 0.63
CDKN1B-201ENST00000228872 NT5C2P49902 561 aa19.01■□□□□ 0.63
CDKN1B-201ENST00000228872 MRPS35P82673 323 aaKnown RBP19.01■□□□□ 0.63
CDKN1B-201ENST00000228872 CLUL1Q15846 466 aa19.01■□□□□ 0.63
CDKN1B-201ENST00000228872 LONRF1Q17RB8 773 aa19.01■□□□□ 0.63
CDKN1B-201ENST00000228872 MAPKAPK5Q8IW41 473 aa19.01■□□□□ 0.63
CDKN1B-201ENST00000228872 LMNTD2Q8IXW0 634 aa19.01■□□□□ 0.63
CDKN1B-201ENST00000228872 PRELID2Q8N945 189 aa19.01■□□□□ 0.63
CDKN1B-201ENST00000228872 SUPT20HQ8NEM7 779 aa19.01■□□□□ 0.63
CDKN1B-201ENST00000228872 PIGSQ96S52 555 aa19.01■□□□□ 0.63
CDKN1B-201ENST00000228872 TMOD4Q9NZQ9 345 aa19.01■□□□□ 0.63
CDKN1B-201ENST00000228872 SAP30BPQ9UHR5 308 aaKnown RBP19.01■□□□□ 0.63
CDKN1B-201ENST00000228872 PFASO15067 1338 aa19.01■□□□□ 0.63
CDKN1B-201ENST00000228872 E7ENQ6 273 aa19■□□□□ 0.63
CDKN1B-201ENST00000228872 G3V3G9 751 aa19■□□□□ 0.63
CDKN1B-201ENST00000228872 NPTXRO95502 500 aa19■□□□□ 0.63
CDKN1B-201ENST00000228872 FKBP1AP62942 108 aaKnown RBP19■□□□□ 0.63
CDKN1B-201ENST00000228872 MXRA7P84157 204 aa19■□□□□ 0.63
CDKN1B-201ENST00000228872 ROR2Q01974 943 aaKnown RBP19■□□□□ 0.63
CDKN1B-201ENST00000228872 CCDC15Q0P6D6 951 aa19■□□□□ 0.63
CDKN1B-201ENST00000228872 CMPK2Q5EBM0 449 aa19■□□□□ 0.63
CDKN1B-201ENST00000228872 DCAF8Q5TAQ9 597 aa19■□□□□ 0.63
CDKN1B-201ENST00000228872 ECHDC2Q86YB7 292 aa19■□□□□ 0.63
CDKN1B-201ENST00000228872 SLC17A8Q8NDX2 589 aa19■□□□□ 0.63
CDKN1B-201ENST00000228872 GDAP1Q8TB36 358 aa19■□□□□ 0.63
CDKN1B-201ENST00000228872 KLHL14Q9P2G3 628 aa19■□□□□ 0.63
CDKN1B-201ENST00000228872 BRCA1P38398 1863 aaKnown RBP19■□□□□ 0.63
CDKN1B-201ENST00000228872 E9PMD0 336 aa19■□□□□ 0.63
CDKN1B-201ENST00000228872 PODXLO00592 558 aa19■□□□□ 0.63
CDKN1B-201ENST00000228872 MAP3K13O43283 966 aa19■□□□□ 0.63
CDKN1B-201ENST00000228872 ATP6V1C1P21283 382 aa19■□□□□ 0.63
CDKN1B-201ENST00000228872 ABCB4P21439 1286 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms