RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 MlxiplQ99MZ3 864 aa13.9□□□□□ -0.18
Nup88-203ENSMUST00000108531 Cd2bp2Q9CWK3 342 aaKnown RBP13.9□□□□□ -0.18
Nup88-203ENSMUST00000108531 Mta2Q9R190 668 aa13.9□□□□□ -0.18
Nup88-203ENSMUST00000108531 Nfs1Q9Z1J3 459 aa13.9□□□□□ -0.18
Nup88-203ENSMUST00000108531 DohhA0A1Y7VJ29 135 aa13.89□□□□□ -0.19
Nup88-203ENSMUST00000108531 Casq2O09161 415 aa13.89□□□□□ -0.19
Nup88-203ENSMUST00000108531 Znf697Q569E7 569 aa13.89□□□□□ -0.19
Nup88-203ENSMUST00000108531 Rusc1Q8BG26 893 aa13.89□□□□□ -0.19
Nup88-203ENSMUST00000108531 Kat5Q8CHK4 513 aa13.89□□□□□ -0.19
Nup88-203ENSMUST00000108531 Slc26a6Q8CIW6 758 aa13.89□□□□□ -0.19
Nup88-203ENSMUST00000108531 Slc4a8Q8JZR6 1089 aa13.89□□□□□ -0.19
Nup88-203ENSMUST00000108531 Kiaa0391Q8JZY4 584 aaKnown RBP13.89□□□□□ -0.19
Nup88-203ENSMUST00000108531 4921524L21RikQ9D5T2 438 aa13.89□□□□□ -0.19
Nup88-203ENSMUST00000108531 XdhQ00519 1335 aa13.89□□□□□ -0.19
Nup88-203ENSMUST00000108531 Atp2c2A7L9Z8 944 aa13.89□□□□□ -0.19
Nup88-203ENSMUST00000108531 Apba1B2RUJ5 842 aa13.89□□□□□ -0.19
Nup88-203ENSMUST00000108531 Cacna2d1O08532 1103 aa13.89□□□□□ -0.19
Nup88-203ENSMUST00000108531 LdhbP16125 334 aaKnown RBP13.89□□□□□ -0.19
Nup88-203ENSMUST00000108531 Stmn4P63042 189 aa13.89□□□□□ -0.19
Nup88-203ENSMUST00000108531 MaeaQ4VC33 396 aa13.89□□□□□ -0.19
Nup88-203ENSMUST00000108531 AlcamQ61490 583 aa13.89□□□□□ -0.19
Nup88-203ENSMUST00000108531 Tmem132dQ76HP3 1097 aa13.89□□□□□ -0.19
Nup88-203ENSMUST00000108531 Calhm6Q8C9E8 313 aa13.89□□□□□ -0.19
Nup88-203ENSMUST00000108531 BbxQ8VBW5 907 aa13.89□□□□□ -0.19
Nup88-203ENSMUST00000108531 Atp6v1e2Q9D593 226 aa13.89□□□□□ -0.19
Nup88-203ENSMUST00000108531 Tcirg1Q9JHF5 834 aa13.89□□□□□ -0.19
Nup88-203ENSMUST00000108531 NagaQ9QWR8 415 aa13.89□□□□□ -0.19
Nup88-203ENSMUST00000108531 Frmpd3A0A140LIW3 1774 aa13.89□□□□□ -0.19
Nup88-203ENSMUST00000108531 Mtcl1Q3UHU5 1945 aa13.88□□□□□ -0.19
Nup88-203ENSMUST00000108531 Patl2A2ARM1 529 aa13.88□□□□□ -0.19
Nup88-203ENSMUST00000108531 Flot1O08917 428 aa13.88□□□□□ -0.19
Nup88-203ENSMUST00000108531 MyocO70624 490 aa13.88□□□□□ -0.19
Nup88-203ENSMUST00000108531 Phactr4Q501J7 694 aa13.88□□□□□ -0.19
Nup88-203ENSMUST00000108531 Jade3Q6IE82 823 aa13.88□□□□□ -0.19
Nup88-203ENSMUST00000108531 Ano5Q75UR0 904 aa13.88□□□□□ -0.19
Nup88-203ENSMUST00000108531 Raver2Q7TPD6 673 aa13.88□□□□□ -0.19
Nup88-203ENSMUST00000108531 Trim65Q8BFW4 522 aa13.88□□□□□ -0.19
Nup88-203ENSMUST00000108531 Sap130Q8BIH0 1057 aa13.88□□□□□ -0.19
Nup88-203ENSMUST00000108531 C130026I21RikQ8C898 291 aa13.88□□□□□ -0.19
Nup88-203ENSMUST00000108531 MyripQ8K3I4 856 aa13.88□□□□□ -0.19
Nup88-203ENSMUST00000108531 Gprc5cQ8K3J9 440 aa13.88□□□□□ -0.19
Nup88-203ENSMUST00000108531 Nmrk1Q91W63 195 aa13.88□□□□□ -0.19
Nup88-203ENSMUST00000108531 Zcchc8Q9CYA6 709 aaKnown RBP13.88□□□□□ -0.19
Nup88-203ENSMUST00000108531 IkbipQ9DBZ1 373 aa13.88□□□□□ -0.19
Nup88-203ENSMUST00000108531 Kmt2eQ3UG20 1868 aa13.88□□□□□ -0.19
Nup88-203ENSMUST00000108531 NynrinQ5DTZ0 1840 aa13.88□□□□□ -0.19
Nup88-203ENSMUST00000108531 RptorQ8K4Q0 1335 aa13.88□□□□□ -0.19
Nup88-203ENSMUST00000108531 Adamtsl1Q8BLI0 1745 aa13.88□□□□□ -0.19
Nup88-203ENSMUST00000108531 Fyb2A2A995 729 aa13.88□□□□□ -0.19
Nup88-203ENSMUST00000108531 Abi2P62484 446 aa13.88□□□□□ -0.19
Nup88-203ENSMUST00000108531 Etv6P97360 485 aa13.88□□□□□ -0.19
Nup88-203ENSMUST00000108531 Rrp36Q3UFY0 244 aaKnown RBP13.88□□□□□ -0.19
Nup88-203ENSMUST00000108531 Miga1Q4QQM5 600 aa13.88□□□□□ -0.19
Nup88-203ENSMUST00000108531 OgdhQ60597 1023 aaKnown RBP13.88□□□□□ -0.19
Nup88-203ENSMUST00000108531 Dnajc8Q6NZB0 253 aaKnown RBP13.88□□□□□ -0.19
Nup88-203ENSMUST00000108531 SpopQ6ZWS8 374 aa13.88□□□□□ -0.19
Nup88-203ENSMUST00000108531 Gm5622Q810Q0 167 aa13.88□□□□□ -0.19
Nup88-203ENSMUST00000108531 Iffo1Q8BXL9 562 aa13.88□□□□□ -0.19
Nup88-203ENSMUST00000108531 Calhm4Q8CE93 315 aa13.88□□□□□ -0.19
Nup88-203ENSMUST00000108531 Slc12a8Q8VI23 705 aa13.88□□□□□ -0.19
Nup88-203ENSMUST00000108531 Dph6Q9CQ28 267 aa13.88□□□□□ -0.19
Nup88-203ENSMUST00000108531 Mcur1Q9CXD6 340 aa13.88□□□□□ -0.19
Nup88-203ENSMUST00000108531 Cpb2Q9JHH6 422 aa13.88□□□□□ -0.19
Nup88-203ENSMUST00000108531 Net1Q9Z206 595 aa13.88□□□□□ -0.19
Nup88-203ENSMUST00000108531 Ccdc152E9PX14 254 aa13.87□□□□□ -0.19
Nup88-203ENSMUST00000108531 Slc16a2O70324 545 aa13.87□□□□□ -0.19
Nup88-203ENSMUST00000108531 Mgat1P27808 447 aa13.87□□□□□ -0.19
Nup88-203ENSMUST00000108531 Rit2P70425 217 aa13.87□□□□□ -0.19
Nup88-203ENSMUST00000108531 Pbxip1Q3TVI8 727 aa13.87□□□□□ -0.19
Nup88-203ENSMUST00000108531 SpdyaQ5IBH7 310 aa13.87□□□□□ -0.19
Nup88-203ENSMUST00000108531 Kcnt1Q6ZPR4 1224 aa13.87□□□□□ -0.19
Nup88-203ENSMUST00000108531 Slc7a6osQ7TPE5 306 aa13.87□□□□□ -0.19
Nup88-203ENSMUST00000108531 Fbxo38Q8BMI0 1194 aa13.87□□□□□ -0.19
Nup88-203ENSMUST00000108531 Zhx2Q8C0C0 836 aaKnown RBP13.87□□□□□ -0.19
Nup88-203ENSMUST00000108531 Btbd9Q8C726 612 aa13.87□□□□□ -0.19
Nup88-203ENSMUST00000108531 Pcdhgb4Q91XX6 912 aa13.87□□□□□ -0.19
Nup88-203ENSMUST00000108531 Ttc1Q91Z38 292 aa13.87□□□□□ -0.19
Nup88-203ENSMUST00000108531 Hspbp1Q99P31 357 aaKnown RBP13.87□□□□□ -0.19
Nup88-203ENSMUST00000108531 Gtf2h1Q9DBA9 547 aa13.87□□□□□ -0.19
Nup88-203ENSMUST00000108531 Cpne8Q9DC53 577 aa13.87□□□□□ -0.19
Nup88-203ENSMUST00000108531 1700018F24RikB2RW27 314 aa13.87□□□□□ -0.19
Nup88-203ENSMUST00000108531 Gm6588E9Q3K0 461 aa13.87□□□□□ -0.19
Nup88-203ENSMUST00000108531 Gm5814J3QP80 125 aa13.87□□□□□ -0.19
Nup88-203ENSMUST00000108531 Agbl1Q09M05 972 aa13.87□□□□□ -0.19
Nup88-203ENSMUST00000108531 Six1Q62231 284 aa13.87□□□□□ -0.19
Nup88-203ENSMUST00000108531 IgflQ6B9Z0 140 aa13.87□□□□□ -0.19
Nup88-203ENSMUST00000108531 Olfml3Q8BK62 406 aa13.87□□□□□ -0.19
Nup88-203ENSMUST00000108531 Mill1Q8HWE7 395 aa13.87□□□□□ -0.19
Nup88-203ENSMUST00000108531 D630039A03RikQ8K0M7 236 aa13.87□□□□□ -0.19
Nup88-203ENSMUST00000108531 Mrfap1Q9CQL7 125 aa13.87□□□□□ -0.19
Nup88-203ENSMUST00000108531 Snx10Q9CWT3 201 aa13.87□□□□□ -0.19
Nup88-203ENSMUST00000108531 4930449I24RikQ9D5E3 319 aa13.87□□□□□ -0.19
Nup88-203ENSMUST00000108531 Mipol1Q9D9F8 279 aa13.87□□□□□ -0.19
Nup88-203ENSMUST00000108531 Bpifb9bA2AJD1 591 aa13.86□□□□□ -0.19
Nup88-203ENSMUST00000108531 6030498E09RikB1AX85 169 aa13.86□□□□□ -0.19
Nup88-203ENSMUST00000108531 Heatr4E9Q357 955 aa13.86□□□□□ -0.19
Nup88-203ENSMUST00000108531 Parp2O88554 559 aa13.86□□□□□ -0.19
Nup88-203ENSMUST00000108531 Irf8P23611 424 aa13.86□□□□□ -0.19
Nup88-203ENSMUST00000108531 Ttc39dQ0VF76 604 aa13.86□□□□□ -0.19
Nup88-203ENSMUST00000108531 Trmt1Q3TX08 663 aa13.86□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 24 ms