RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Vmn2r55G3UWZ4 781 aa16.05■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Vmn2r53L7N473 806 aa16.05■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Pdrg1P59048 133 aa16.05■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Adcy5P84309 1262 aa16.05■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Fads2p1Q0VAX3 487 aa16.05■□□□□ 0.16
Ercc1-201ENSMUST00000003645 EregQ61521 162 aa16.05■□□□□ 0.16
Ercc1-201ENSMUST00000003645 FAM120AQ6A0A9 1112 aaKnown RBP16.05■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Phf24Q80TL4 400 aa16.05■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Cnksr3Q8BMA3 555 aa16.05■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Cep95Q8BVV7 827 aa16.05■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Ccdc169Q8BXX9 214 aa16.05■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Ccser1Q8C0C4 895 aa16.05■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Traf3ip3Q8C0G2 513 aa16.05■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Klhl30Q8C3F7 581 aa16.05■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Q8C5S3 137 aa16.05■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Vps52Q8C754 723 aaKnown RBP16.05■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Pym1Q8CHP5 203 aaKnown RBP16.05■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Akirin1Q99LF1 191 aa16.05■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Igdcc4Q9EQS9 1252 aa16.05■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Rab27aQ9ERI2 221 aa16.05■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Copb1Q9JIF7 953 aa16.05■□□□□ 0.16
Ercc1-201ENSMUST00000003645 AmfrQ9R049 643 aa16.05■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Myo5aQ99104 1853 aaKnown RBP16.05■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Zscan25B2RX31 543 aa16.04■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Chrna9G3X8Z7 479 aa16.04■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Mmp3P28862 477 aa16.04■□□□□ 0.16
Ercc1-201ENSMUST00000003645 TdgP56581 421 aa16.04■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Arf4P61750 180 aa16.04■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Dlg3P70175 849 aa16.04■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Atp13a4Q5XF90 1193 aa16.04■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Ankrd24Q80VM7 985 aa16.04■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Q8BGN9 141 aa16.04■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Adgrg2Q8CJ12 1009 aa16.04■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Sbk1Q8QZX0 417 aa16.04■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Ccdc96Q9CR92 584 aa16.04■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Atp6ap2Q9CYN9 350 aa16.04■□□□□ 0.16
Ercc1-201ENSMUST00000003645 4933402E13RikQ9D4D2 429 aa16.04■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Mmel1Q9JLI3 765 aa16.04■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Map2k5Q9WVS7 448 aa16.04■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Ep400Q8CHI8 3072 aaKnown RBP16.03■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Gm13941A2AJ38 245 aa16.03■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Etnk2A7MCT6 385 aa16.03■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Zfr2E9Q5M4 874 aa16.03■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Gimap9G3X987 291 aa16.03■□□□□ 0.16
Ercc1-201ENSMUST00000003645 MycP01108 439 aa16.03■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Tbx3P70324 741 aa16.03■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Edem3Q2HXL6 931 aa16.03■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Fam198aQ3UY90 562 aa16.03■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Fhod1Q6P9Q4 1197 aa16.03■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Znf507Q6ZPY5 941 aa16.03■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Ddx10Q80Y44 875 aaKnown RBP16.03■□□□□ 0.16
Ercc1-201ENSMUST00000003645 1700001K19RikQ80ZT1 219 aa16.03■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Zc3h6Q8BYK8 1177 aa16.03■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Ago2Q8CJG0 860 aaKnown RBP16.03■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Alas1Q8VC19 642 aa16.03■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Pcdha7Q91Y13 937 aa16.03■□□□□ 0.16
Ercc1-201ENSMUST00000003645 PrameQ9D4Z5 464 aa16.03■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Ccdc89Q9DA73 370 aa16.03■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Cmtr1Q9DBC3 837 aa16.03■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Usp29Q9ES63 869 aa16.03■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Foxe3Q9QY14 288 aa16.03■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Ralgapa2A3KGS3 1872 aa16.03■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Pds5aQ6A026 1332 aa16.03■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Supt3B0QZW4 406 aa16.02■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Mfsd14aP70187 490 aa16.02■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Cct6aP80317 531 aaKnown RBP16.02■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Gabpb2P81069 414 aa16.02■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Echdc2Q3TLP5 296 aa16.02■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Palb2Q3U0P1 1104 aa16.02■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Krt31Q61765 416 aa16.02■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Tspan18Q80WR1 248 aa16.02■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Ankfy1Q810B6 1169 aa16.02■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Gpr180Q8BPS4 441 aa16.02■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Ints4Q8CIM8 964 aa16.02■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Castor1Q9CWQ8 331 aa16.02■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Dusp6Q9DBB1 381 aa16.02■□□□□ 0.16
Ercc1-201ENSMUST00000003645 Cdr2lA2A6T1 465 aa16.01■□□□□ 0.15
Ercc1-201ENSMUST00000003645 Cspp1B2RX88 1205 aa16.01■□□□□ 0.15
Ercc1-201ENSMUST00000003645 Ugt1a8D3Z748 530 aa16.01■□□□□ 0.15
Ercc1-201ENSMUST00000003645 Ugt1a10E9PXN7 530 aa16.01■□□□□ 0.15
Ercc1-201ENSMUST00000003645 DgkkE9Q7N4 1118 aa16.01■□□□□ 0.15
Ercc1-201ENSMUST00000003645 Pip4k2aO70172 405 aa16.01■□□□□ 0.15
Ercc1-201ENSMUST00000003645 Cd72P21855 354 aa16.01■□□□□ 0.15
Ercc1-201ENSMUST00000003645 Pbx1P41778 430 aa16.01■□□□□ 0.15
Ercc1-201ENSMUST00000003645 FpgsP48760 587 aa16.01■□□□□ 0.15
Ercc1-201ENSMUST00000003645 Slc26a2Q62273 739 aa16.01■□□□□ 0.15
Ercc1-201ENSMUST00000003645 Nop9Q8BMC4 636 aaKnown RBP16.01■□□□□ 0.15
Ercc1-201ENSMUST00000003645 Rapgef5Q8C0Q9 814 aa16.01■□□□□ 0.15
Ercc1-201ENSMUST00000003645 Slc9b1Q8C0X2 565 aa16.01■□□□□ 0.15
Ercc1-201ENSMUST00000003645 Fam160b1Q8CDM8 764 aa16.01■□□□□ 0.15
Ercc1-201ENSMUST00000003645 OgtQ8CGY8 1046 aa16.01■□□□□ 0.15
Ercc1-201ENSMUST00000003645 Socs7Q8VHQ2 579 aa16.01■□□□□ 0.15
Ercc1-201ENSMUST00000003645 Ndst4Q9EQW8 872 aa16.01■□□□□ 0.15
Ercc1-201ENSMUST00000003645 Arih2Q9Z1K6 492 aa16.01■□□□□ 0.15
Ercc1-201ENSMUST00000003645 Tbkbp1A2A9T0 611 aa16■□□□□ 0.15
Ercc1-201ENSMUST00000003645 Ldlrad1D3YYZ1 218 aa16■□□□□ 0.15
Ercc1-201ENSMUST00000003645 Fgd3O88842 733 aa16■□□□□ 0.15
Ercc1-201ENSMUST00000003645 Sox5P35710 763 aa16■□□□□ 0.15
Ercc1-201ENSMUST00000003645 Scarf2P59222 833 aa16■□□□□ 0.15
Ercc1-201ENSMUST00000003645 VegfaQ00731 214 aa16■□□□□ 0.15
Retrieved 100 of 22,080 RNA–protein pairs in 25.9 ms