RNA–Protein interactions for RNA: YPR088C

SRP54, Transcript of Signal recognition particle (SRP) subunit (homolog of mammalian SRP54), yeastyeast

Gene SRP54, Length 1,626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP54YPR088C MAL32P38158 584 aa7.52□□□□□ -1.2
SRP54YPR088C MAL12P53341 584 aa7.52□□□□□ -1.2
SRP54YPR088C ATG21Q02887 496 aa7.52□□□□□ -1.2
SRP54YPR088C FDC1Q03034 503 aa7.52□□□□□ -1.2
SRP54YPR088C RSM10Q03201 203 aa7.52□□□□□ -1.2
SRP54YPR088C NUP53Q03790 475 aa7.52□□□□□ -1.2
SRP54YPR088C SNX41Q04053 625 aa7.52□□□□□ -1.2
SRP54YPR088C TAZ1Q06510 381 aa7.52□□□□□ -1.2
SRP54YPR088C IPK1Q06667 281 aa7.52□□□□□ -1.2
SRP54YPR088C RRG7Q08774 242 aaPredicted RBP7.52□□□□□ -1.2
SRP54YPR088C FRE5Q08908 694 aa7.52□□□□□ -1.2
SRP54YPR088C MED2Q12124 431 aa7.52□□□□□ -1.2
SRP54YPR088C ACF2Q12168 779 aa7.52□□□□□ -1.2
SRP54YPR088C YOL114CQ12322 202 aa7.52□□□□□ -1.2
SRP54YPR088C AIM17P23180 465 aaKnown RBP7.52□□□□□ -1.21
SRP54YPR088C RAD51P25454 400 aa7.52□□□□□ -1.21
SRP54YPR088C LDB16P25587 256 aa7.52□□□□□ -1.21
SRP54YPR088C SBA1P28707 216 aaKnown RBP7.52□□□□□ -1.21
SRP54YPR088C AMN1P38285 549 aaPredicted RBP7.52□□□□□ -1.21
SRP54YPR088C VBA2P38358 474 aaKnown RBP7.52□□□□□ -1.21
SRP54YPR088C MLH1P38920 769 aa7.52□□□□□ -1.21
SRP54YPR088C YIL165CP40446 119 aa7.52□□□□□ -1.21
SRP54YPR088C PKP1P40530 394 aa7.52□□□□□ -1.21
SRP54YPR088C YJL218WP40892 196 aaKnown RBP7.52□□□□□ -1.21
SRP54YPR088C SFH5P47008 294 aa7.52□□□□□ -1.21
SRP54YPR088C CPR8P53728 308 aa7.52□□□□□ -1.21
SRP54YPR088C PFA5Q03289 374 aa7.52□□□□□ -1.21
SRP54YPR088C GPI17Q04080 534 aa7.52□□□□□ -1.21
SRP54YPR088C HRT1Q08273 121 aa7.52□□□□□ -1.21
SRP54YPR088C RAX1Q08760 435 aa7.52□□□□□ -1.21
SRP54YPR088C YDL176WQ12027 708 aa7.52□□□□□ -1.21
SRP54YPR088C YRA1Q12159 226 aaKnown RBP7.52□□□□□ -1.21
SRP54YPR088C RPB8P20436 146 aa7.51□□□□□ -1.21
SRP54YPR088C PUB1P32588 453 aaKnown RBP RIP-Chip data7.51□□□□□ -1.21not detected
SRP54YPR088C PAD1P33751 242 aaKnown RBP RIP-Chip data7.51□□□□□ -1.21not detected
SRP54YPR088C YBR063CP38083 404 aa7.51□□□□□ -1.21
SRP54YPR088C DTR1P38125 572 aa7.51□□□□□ -1.21
SRP54YPR088C CHK1P38147 527 aa7.51□□□□□ -1.21
SRP54YPR088C OM14P38325 134 aa7.51□□□□□ -1.21
SRP54YPR088C PHO90P39535 881 aa7.51□□□□□ -1.21
SRP54YPR088C YER158CP40095 573 aa7.51□□□□□ -1.21
SRP54YPR088C GDS1P41913 522 aa7.51□□□□□ -1.21
SRP54YPR088C PGU1P47180 361 aa7.51□□□□□ -1.21
SRP54YPR088C MKC7P53379 596 aa7.51□□□□□ -1.21
SRP54YPR088C CIK1Q01649 594 aa7.51□□□□□ -1.21
SRP54YPR088C YDR514CQ04408 483 aa7.51□□□□□ -1.21
SRP54YPR088C IRC19Q07843 230 aa7.51□□□□□ -1.21
SRP54YPR088C YOR343CQ12484 108 aa7.51□□□□□ -1.21
SRP54YPR088C YEL009C-AA0A023PZF2 135 aa7.5□□□□□ -1.21
SRP54YPR088C RPN13O13563 156 aa7.5□□□□□ -1.21
SRP54YPR088C PEP4P07267 405 aaKnown RBP7.5□□□□□ -1.21
SRP54YPR088C GAS1P22146 559 aaKnown RBP7.5□□□□□ -1.21
SRP54YPR088C PRE7P23724 241 aaKnown RBP7.5□□□□□ -1.21
SRP54YPR088C SCO1P23833 295 aa7.5□□□□□ -1.21
SRP54YPR088C FUN19P28003 413 aaPredicted RBP7.5□□□□□ -1.21
SRP54YPR088C SDS22P36047 338 aa7.5□□□□□ -1.21
SRP54YPR088C GRE3P38715 327 aaKnown RBP RIP-Chip data7.5□□□□□ -1.21not detected
SRP54YPR088C YER184CP39961 794 aa7.5□□□□□ -1.21
SRP54YPR088C SDP1P40479 209 aa7.5□□□□□ -1.21
SRP54YPR088C COX20Q04935 205 aa7.5□□□□□ -1.21
SRP54YPR088C NGL1Q08213 363 aaKnown RBP7.5□□□□□ -1.21
SRP54YPR088C TY1A-NL1Q12391 440 aaKnown RBP7.5□□□□□ -1.21
SRP54YPR088C KIN28P06242 306 aa7.49□□□□□ -1.21
SRP54YPR088C YHR214C-DP0CX93 97 aa7.49□□□□□ -1.21
SRP54YPR088C AHC2P25649 128 aa7.49□□□□□ -1.21
SRP54YPR088C CPR3P25719 182 aa7.49□□□□□ -1.21
SRP54YPR088C RSM22P36056 628 aa7.49□□□□□ -1.21
SRP54YPR088C THI2P38141 450 aa7.49□□□□□ -1.21
SRP54YPR088C YER010CP40011 234 aa7.49□□□□□ -1.21
SRP54YPR088C SER3P40054 469 aa7.49□□□□□ -1.21
SRP54YPR088C RPE1P46969 238 aa7.49□□□□□ -1.21
SRP54YPR088C PPT1P53043 513 aa7.49□□□□□ -1.21
SRP54YPR088C VOA1P53262 265 aa7.49□□□□□ -1.21
SRP54YPR088C PAU12P53343 120 aa7.49□□□□□ -1.21
SRP54YPR088C NUP116Q02630 1113 aa7.49□□□□□ -1.21
SRP54YPR088C ERG8P24521 451 aa7.49□□□□□ -1.21
SRP54YPR088C YCR102CP25608 368 aa7.49□□□□□ -1.21
SRP54YPR088C NAM9P27929 486 aa7.49□□□□□ -1.21
SRP54YPR088C FUN26P31381 517 aa7.49□□□□□ -1.21
SRP54YPR088C NPL6P32832 435 aa7.49□□□□□ -1.21
SRP54YPR088C IKS1P47042 667 aa7.49□□□□□ -1.21
SRP54YPR088C SCS7Q03529 384 aa7.49□□□□□ -1.21
SRP54YPR088C GIS1Q03833 894 aa7.49□□□□□ -1.21
SRP54YPR088C MRPL51Q06090 140 aaPredicted RBP7.49□□□□□ -1.21
SRP54YPR088C AIM6Q07716 390 aa7.49□□□□□ -1.21
SRP54YPR088C RDL2Q08742 149 aaKnown RBP7.49□□□□□ -1.21
SRP54YPR088C SWM1Q12379 170 aa7.49□□□□□ -1.21
SRP54YPR088C YPR1Q12458 312 aa7.49□□□□□ -1.21
SRP54YPR088C FRE6Q12473 712 aa7.49□□□□□ -1.21
SRP54YPR088C SIR2P06700 562 aa7.48□□□□□ -1.21
SRP54YPR088C NFT1P0CE68 1218 aa7.48□□□□□ -1.21
SRP54YPR088C HMG1P12683 1054 aa7.48□□□□□ -1.21
SRP54YPR088C EXG1P23776 448 aaKnown RBP7.48□□□□□ -1.21
SRP54YPR088C FCY21P40039 528 aa7.48□□□□□ -1.21
SRP54YPR088C NAS2P40555 220 aa7.48□□□□□ -1.21
SRP54YPR088C BPL1P48445 690 aaPredicted RBP7.48□□□□□ -1.21
SRP54YPR088C BRR6P53062 197 aa7.48□□□□□ -1.21
SRP54YPR088C RAI1P53063 387 aaKnown RBP7.48□□□□□ -1.21
SRP54YPR088C YPR109WQ06104 294 aa7.48□□□□□ -1.21
SRP54YPR088C RRP9Q06506 573 aaKnown RBP7.48□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 25.2 ms