RNA–Protein interactions for RNA: YOR388C

FDH1, Transcript of NAD(+)-dependent formate dehydrogenase, yeast

Gene FDH1, Length 1,131 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FDH1	YOR388C	RPC11	Q04307	110 aa	Predicted RBP	3.55	□□□□□ -1.84
FDH1	YOR388C	RQC1	Q05468	723 aa	Known RBP	3.55	□□□□□ -1.84
FDH1	YOR388C	GPI11	Q06636	219 aa		3.55	□□□□□ -1.84
FDH1	YOR388C	YLR413W	Q06689	675 aa		3.55	□□□□□ -1.84
FDH1	YOR388C	PGC1	Q08959	321 aa		3.55	□□□□□ -1.84
FDH1	YOR388C	YDL009C	Q12210	107 aa		3.55	□□□□□ -1.84
FDH1	YOR388C	TRM10	Q12400	293 aa		3.55	□□□□□ -1.84
FDH1	YOR388C	ATG31	Q12421	196 aa		3.55	□□□□□ -1.84
FDH1	YOR388C	YPR1	Q12458	312 aa		3.55	□□□□□ -1.84
FDH1	YOR388C	DCP1	Q12517	231 aa	Predicted RBP	3.55	□□□□□ -1.84
FDH1	YOR388C	SPT15	P13393	240 aa	Known RBP	3.54	□□□□□ -1.84
FDH1	YOR388C	DBF2	P22204	572 aa		3.54	□□□□□ -1.84
FDH1	YOR388C	MRPL8	P22353	238 aa		3.54	□□□□□ -1.84
FDH1	YOR388C	CHA1	P25379	360 aa	Known RBP	3.54	□□□□□ -1.84
FDH1	YOR388C	VMA8	P32610	256 aa	Known RBP	3.54	□□□□□ -1.84
FDH1	YOR388C	TAF14	P35189	244 aa		3.54	□□□□□ -1.84
FDH1	YOR388C	YKL063C	P35725	167 aa		3.54	□□□□□ -1.84
FDH1	YOR388C	FUI1	P38196	639 aa		3.54	□□□□□ -1.84
FDH1	YOR388C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	3.54	□□□□□ -1.84	not detected
FDH1	YOR388C	ARN2	P38724	620 aa		3.54	□□□□□ -1.84
FDH1	YOR388C	YHR045W	P38775	560 aa		3.54	□□□□□ -1.84
FDH1	YOR388C	LSM12	P38828	187 aa	Known RBP	3.54	□□□□□ -1.84
FDH1	YOR388C	YER137C	P40083	148 aa	Known RBP	3.54	□□□□□ -1.84
FDH1	YOR388C	YKE4	P40544	346 aa		3.54	□□□□□ -1.84
FDH1	YOR388C	YPS6	P40583	537 aa		3.54	□□□□□ -1.84
FDH1	YOR388C	SNX4	P47057	423 aa		3.54	□□□□□ -1.84
FDH1	YOR388C	MRH4	P53166	561 aa		3.54	□□□□□ -1.84
FDH1	YOR388C	YGR126W	P53274	230 aa		3.54	□□□□□ -1.84
FDH1	YOR388C	MRPL50	P53724	139 aa		3.54	□□□□□ -1.84
FDH1	YOR388C	DBP6	P53734	629 aa	Known RBP	3.54	□□□□□ -1.84
FDH1	YOR388C	GRX5	Q02784	150 aa		3.54	□□□□□ -1.84
FDH1	YOR388C	RLI1	Q03195	608 aa	Known RBP	3.54	□□□□□ -1.84
FDH1	YOR388C	GAS3	Q03655	524 aa		3.54	□□□□□ -1.84
FDH1	YOR388C	TAF12	Q03761	539 aa		3.54	□□□□□ -1.84
FDH1	YOR388C	CSN9	Q03981	162 aa		3.54	□□□□□ -1.84
FDH1	YOR388C	APC4	Q04601	652 aa		3.54	□□□□□ -1.84
FDH1	YOR388C	YPR114W	Q06107	315 aa		3.54	□□□□□ -1.84
FDH1	YOR388C	LUC7	Q07508	261 aa	Predicted RBP	3.54	□□□□□ -1.84
FDH1	YOR388C	PFK27	Q12471	397 aa	Predicted RBP	3.54	□□□□□ -1.84
FDH1	YOR388C	YOL159C-A	Q3E769	90 aa		3.54	□□□□□ -1.84
FDH1	YOR388C	YKL018C-A	Q3E7A7	99 aa		3.54	□□□□□ -1.84
FDH1	YOR388C	SAS5	Q99314	248 aa		3.54	□□□□□ -1.84
FDH1	YOR388C	THP2	O13539	261 aa	Known RBP	3.53	□□□□□ -1.84
FDH1	YOR388C	CBP2	P03874	630 aa	Predicted RBP	3.53	□□□□□ -1.84
FDH1	YOR388C	ARG3	P05150	338 aa		3.53	□□□□□ -1.84
FDH1	YOR388C	HEM2	P05373	342 aa		3.53	□□□□□ -1.84
FDH1	YOR388C	RAD7	P06779	565 aa		3.53	□□□□□ -1.84
FDH1	YOR388C	PET494	P07390	489 aa	Predicted RBP	3.53	□□□□□ -1.84
FDH1	YOR388C	SCH9	P11792	824 aa	Known RBP	3.53	□□□□□ -1.84
FDH1	YOR388C	RED1	P14291	827 aa		3.53	□□□□□ -1.84
FDH1	YOR388C	HXT2	P23585	541 aa		3.53	□□□□□ -1.84
FDH1	YOR388C	RPL24B	P24000	155 aa	Known RBP	3.53	□□□□□ -1.84
FDH1	YOR388C	MNE1	P24720	663 aa		3.53	□□□□□ -1.84
FDH1	YOR388C	GIT1	P25346	518 aa		3.53	□□□□□ -1.84
FDH1	YOR388C	ATG22	P25568	528 aa		3.53	□□□□□ -1.84
FDH1	YOR388C	YCL068C	P25593	260 aa		3.53	□□□□□ -1.84
FDH1	YOR388C	ASF2	P32448	525 aa	Predicted RBP	3.53	□□□□□ -1.84
FDH1	YOR388C	MEI5	P32489	222 aa		3.53	□□□□□ -1.84
FDH1	YOR388C	SMI1	P32566	505 aa		3.53	□□□□□ -1.84
FDH1	YOR388C	ZRT3	P34240	503 aa		3.53	□□□□□ -1.84
FDH1	YOR388C	PMU1	P36069	295 aa		3.53	□□□□□ -1.84
FDH1	YOR388C	NAT2	P37293	288 aa		3.53	□□□□□ -1.84
FDH1	YOR388C	TAE1	P38340	232 aa		3.53	□□□□□ -1.84
FDH1	YOR388C	SRP72	P38688	640 aa	Known RBP	3.53	□□□□□ -1.84
FDH1	YOR388C	WSC4	P38739	605 aa		3.53	□□□□□ -1.84
FDH1	YOR388C	IPI1	P38803	334 aa	Predicted RBP	3.53	□□□□□ -1.84
FDH1	YOR388C	YHR210C	P38893	341 aa		3.53	□□□□□ -1.84
FDH1	YOR388C	IPT1	P38954	527 aa		3.53	□□□□□ -1.84
FDH1	YOR388C	COA1	P40452	197 aa		3.53	□□□□□ -1.84
FDH1	YOR388C	GCD10	P41814	478 aa		3.53	□□□□□ -1.84
FDH1	YOR388C	NBP35	P52920	328 aa		3.53	□□□□□ -1.84
FDH1	YOR388C	ZRG17	P53735	605 aa		3.53	□□□□□ -1.84
FDH1	YOR388C	PRM1	P53835	661 aa		3.53	□□□□□ -1.84
FDH1	YOR388C	SLM2	P53955	656 aa		3.53	□□□□□ -1.84
FDH1	YOR388C	LSM3	P57743	89 aa	Known RBP	3.53	□□□□□ -1.84
FDH1	YOR388C	DID2	P69771	204 aa		3.53	□□□□□ -1.84
FDH1	YOR388C	SVL3	Q03088	825 aa	Known RBP	3.53	□□□□□ -1.84
FDH1	YOR388C	ENT5	Q03769	411 aa	Known RBP	3.53	□□□□□ -1.84
FDH1	YOR388C	ARX1	Q03862	593 aa	Known RBP	3.53	□□□□□ -1.84
FDH1	YOR388C	GRX8	Q05926	109 aa		3.53	□□□□□ -1.84
FDH1	YOR388C	ATG10	Q07879	167 aa		3.53	□□□□□ -1.84
FDH1	YOR388C	CLP1	Q08685	445 aa	Predicted RBP	3.53	□□□□□ -1.84
FDH1	YOR388C	YOR365C	Q08844	703 aa		3.53	□□□□□ -1.84
FDH1	YOR388C	SLF1	Q12034	447 aa	Known RBP	3.53	□□□□□ -1.84
FDH1	YOR388C	YOR214C	Q12282	236 aa		3.53	□□□□□ -1.84
FDH1	YOR388C	ATG34	Q12292	412 aa		3.53	□□□□□ -1.84
FDH1	YOR388C	PST2	Q12335	198 aa	Known RBP	3.53	□□□□□ -1.84
FDH1	YOR388C	ATP14	Q12349	124 aa		3.53	□□□□□ -1.84
FDH1	YOR388C	RTR2	Q12378	196 aa		3.53	□□□□□ -1.84
FDH1	YOR388C	APC2	Q12440	853 aa		3.53	□□□□□ -1.84
FDH1	YOR388C	YPL247C	Q12523	523 aa		3.53	□□□□□ -1.84
FDH1	YOR388C	NAG1	Q8TGN9	163 aa		3.53	□□□□□ -1.84
FDH1	YOR388C	IPP1	P00817	287 aa	Known RBP	3.52	□□□□□ -1.85
FDH1	YOR388C	GPH1	P06738	902 aa	Known RBP	3.52	□□□□□ -1.85
FDH1	YOR388C	DBR1	P24309	405 aa	Known RBP	3.52	□□□□□ -1.85
FDH1	YOR388C	CLB3	P24870	427 aa		3.52	□□□□□ -1.85
FDH1	YOR388C	YCR007C	P25354	239 aa		3.52	□□□□□ -1.85
FDH1	YOR388C	DCC1	P25559	380 aa		3.52	□□□□□ -1.85
FDH1	YOR388C	YCR022C	P25620	114 aa		3.52	□□□□□ -1.85
FDH1	YOR388C	BUB2	P26448	306 aa	Predicted RBP	3.52	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms