RNA–Protein interactions for RNA: YOR171C

LCB4, Transcript of Sphingoid long-chain base kinase, yeastyeast

Gene LCB4, Length 1,875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB4YOR171C YCR087C-AP37263 153 aa2.93□□□□□ -1.94
LCB4YOR171C TCM62P38228 572 aaKnown RBP2.93□□□□□ -1.94
LCB4YOR171C VHC1P38329 1120 aa2.93□□□□□ -1.94
LCB4YOR171C TSC10P38342 320 aa2.93□□□□□ -1.94
LCB4YOR171C DIA4P38705 446 aaPredicted RBP2.93□□□□□ -1.94
LCB4YOR171C COX15P40086 486 aa2.93□□□□□ -1.94
LCB4YOR171C BMT5P40493 336 aa2.93□□□□□ -1.94
LCB4YOR171C YFH7P43591 353 aa2.93□□□□□ -1.94
LCB4YOR171C YFR020WP43600 232 aa2.93□□□□□ -1.94
LCB4YOR171C CIN2P46670 268 aa2.93□□□□□ -1.94
LCB4YOR171C ORM1P53224 222 aa2.93□□□□□ -1.94
LCB4YOR171C ERG13P54839 491 aaKnown RBP2.93□□□□□ -1.94
LCB4YOR171C YMR178WQ03219 274 aaKnown RBP2.93□□□□□ -1.94
LCB4YOR171C SNX41Q04053 625 aa2.93□□□□□ -1.94
LCB4YOR171C NEJ1Q06148 342 aa2.93□□□□□ -1.94
LCB4YOR171C ASR1Q06834 288 aa2.93□□□□□ -1.94
LCB4YOR171C YOR387CQ08910 206 aa2.93□□□□□ -1.94
LCB4YOR171C FCY22Q12119 530 aa2.93□□□□□ -1.94
LCB4YOR171C YPR022CQ12139 1133 aa2.93□□□□□ -1.94
LCB4YOR171C FSH3Q99369 266 aa2.93□□□□□ -1.94
LCB4YOR171C HIS1P00498 297 aaKnown RBP2.92□□□□□ -1.94
LCB4YOR171C MRP2P10663 115 aaPredicted RBP2.92□□□□□ -1.94
LCB4YOR171C NAM2P11325 894 aa2.92□□□□□ -1.94
LCB4YOR171C ZWF1P11412 505 aaKnown RBP2.92□□□□□ -1.94
LCB4YOR171C SGV1P23293 657 aaKnown RBP2.92□□□□□ -1.94
LCB4YOR171C COQ3P27680 312 aa2.92□□□□□ -1.94
LCB4YOR171C HEK2P38199 381 aaKnown RBP RIP-Chip data2.92□□□□□ -1.94not detected
LCB4YOR171C SHG1P38337 142 aa2.92□□□□□ -1.94
LCB4YOR171C ARN1P38731 627 aa2.92□□□□□ -1.94
LCB4YOR171C RMD6P39975 231 aa2.92□□□□□ -1.94
LCB4YOR171C YGR210CP42942 411 aa2.92□□□□□ -1.94
LCB4YOR171C SNO3P43544 222 aa2.92□□□□□ -1.94
LCB4YOR171C ASG7P46993 209 aa2.92□□□□□ -1.94
LCB4YOR171C PHB2P50085 310 aa2.92□□□□□ -1.94
LCB4YOR171C SOL4P53315 255 aa2.92□□□□□ -1.94
LCB4YOR171C BIO4P53630 237 aa2.92□□□□□ -1.94
LCB4YOR171C IDP3P53982 420 aaKnown RBP2.92□□□□□ -1.94
LCB4YOR171C NUP49Q02199 472 aa2.92□□□□□ -1.94
LCB4YOR171C RUB1Q03919 77 aa2.92□□□□□ -1.94
LCB4YOR171C BER1Q06688 274 aaKnown RBP2.92□□□□□ -1.94
LCB4YOR171C THP3Q12049 470 aaKnown RBP2.92□□□□□ -1.94
LCB4YOR171C POM33Q12164 279 aa2.92□□□□□ -1.94
LCB4YOR171C YOR114WQ12219 294 aa2.92□□□□□ -1.94
LCB4YOR171C RTR2Q12378 196 aa2.92□□□□□ -1.94
LCB4YOR171C GCY1P14065 312 aaKnown RBP RIP-Chip data2.92□□□□□ -1.94not detected
LCB4YOR171C VMA5P31412 392 aaKnown RBP2.92□□□□□ -1.94
LCB4YOR171C KAR9P32526 644 aa2.92□□□□□ -1.94
LCB4YOR171C ECM13P38195 257 aa2.92□□□□□ -1.94
LCB4YOR171C YBP1P38315 674 aa2.92□□□□□ -1.94
LCB4YOR171C GOS1P38736 223 aa2.92□□□□□ -1.94
LCB4YOR171C WSC4P38739 605 aa2.92□□□□□ -1.94
LCB4YOR171C PCF11P39081 626 aaPredicted RBP2.92□□□□□ -1.94
LCB4YOR171C ELO1P39540 310 aa2.92□□□□□ -1.94
LCB4YOR171C YMR134WP40207 237 aa2.92□□□□□ -1.94
LCB4YOR171C GAT2P40209 560 aa2.92□□□□□ -1.94
LCB4YOR171C IDP2P41939 412 aa2.92□□□□□ -1.94
LCB4YOR171C ATG27P46989 271 aa2.92□□□□□ -1.94
LCB4YOR171C ADO1P47143 340 aaKnown RBP2.92□□□□□ -1.94
LCB4YOR171C SEH1P53011 349 aaKnown RBP2.92□□□□□ -1.94
LCB4YOR171C MGA1P53050 456 aa2.92□□□□□ -1.94
LCB4YOR171C VEL1P53058 206 aa2.92□□□□□ -1.94
LCB4YOR171C GTR2P53290 341 aa2.92□□□□□ -1.94
LCB4YOR171C KTR5P53966 522 aaPredicted RBP2.92□□□□□ -1.94
LCB4YOR171C TPS1Q00764 495 aaKnown RBP2.92□□□□□ -1.94
LCB4YOR171C SED5Q01590 340 aa2.92□□□□□ -1.94
LCB4YOR171C ARL3Q02804 198 aa2.92□□□□□ -1.94
LCB4YOR171C RNY1Q02933 434 aaKnown RBP2.92□□□□□ -1.94
LCB4YOR171C YPR091CQ06833 770 aa2.92□□□□□ -1.94
LCB4YOR171C MCH4Q08268 501 aa2.92□□□□□ -1.94
LCB4YOR171C USB1Q12208 290 aaKnown RBP2.92□□□□□ -1.94
LCB4YOR171C YCL001W-BQ96VH2 84 aa2.92□□□□□ -1.94
LCB4YOR171C RGS2Q99188 309 aa2.92□□□□□ -1.94
LCB4YOR171C MES1P00958 751 aaKnown RBP2.91□□□□□ -1.94
LCB4YOR171C RHO2P06781 192 aa2.91□□□□□ -1.94
LCB4YOR171C CUP2P15315 225 aa2.91□□□□□ -1.94
LCB4YOR171C GAC1P28006 793 aa2.91□□□□□ -1.94
LCB4YOR171C YBL010CP32788 280 aa2.91□□□□□ -1.94
LCB4YOR171C PRX1P34227 261 aaKnown RBP2.91□□□□□ -1.94
LCB4YOR171C MRX3P38172 270 aa2.91□□□□□ -1.94
LCB4YOR171C INM1P38710 295 aa2.91□□□□□ -1.94
LCB4YOR171C MBB1P39534 108 aa2.91□□□□□ -1.94
LCB4YOR171C PHO90P39535 881 aa2.91□□□□□ -1.94
LCB4YOR171C UIP3P39547 235 aa2.91□□□□□ -1.94
LCB4YOR171C OXA1P39952 402 aa2.91□□□□□ -1.94
LCB4YOR171C COG3P40094 801 aa2.91□□□□□ -1.94
LCB4YOR171C RIO2P40160 425 aaKnown RBP2.91□□□□□ -1.94
LCB4YOR171C CSM2P40465 213 aa2.91□□□□□ -1.94
LCB4YOR171C FMP32P43557 207 aa2.91□□□□□ -1.94
LCB4YOR171C PTR3P43606 678 aa2.91□□□□□ -1.94
LCB4YOR171C TRS85P46944 698 aa2.91□□□□□ -1.94
LCB4YOR171C COS6P53344 381 aa2.91□□□□□ -1.94
LCB4YOR171C IBD2P53892 351 aa2.91□□□□□ -1.94
LCB4YOR171C COG5P53951 403 aa2.91□□□□□ -1.94
LCB4YOR171C ABF2Q02486 183 aa2.91□□□□□ -1.94
LCB4YOR171C CWC27Q02770 301 aa2.91□□□□□ -1.94
LCB4YOR171C YMR279CQ03263 540 aa2.91□□□□□ -1.94
LCB4YOR171C SWF1Q04629 336 aa2.91□□□□□ -1.94
LCB4YOR171C PRM6Q04705 352 aa2.91□□□□□ -1.94
LCB4YOR171C ALE1Q08548 619 aa2.91□□□□□ -1.94
LCB4YOR171C JLP1Q12358 412 aa2.91□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 22.3 ms