RNA–Protein interactions for RNA: YHR077C

NMD2, Transcript of Protein involved in the nonsense-mediated mRNA decay (NMD) pathway, yeastyeast

Gene NMD2, Length 3,270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD2YHR077C TIM54P47045 478 aa2.73□□□□□ -1.97
NMD2YHR077C YJR098CP47139 656 aa2.73□□□□□ -1.97
NMD2YHR077C FAA4P47912 694 aaKnown RBP2.73□□□□□ -1.97
NMD2YHR077C TYW3P53177 273 aa2.73□□□□□ -1.97
NMD2YHR077C NUP116Q02630 1113 aa2.73□□□□□ -1.97
NMD2YHR077C ELP4Q02884 456 aaKnown RBP2.73□□□□□ -1.97
NMD2YHR077C IPK1Q06667 281 aa2.73□□□□□ -1.97
NMD2YHR077C LEU9Q12166 604 aaKnown RBP2.73□□□□□ -1.97
NMD2YHR077C ATP14Q12349 124 aa2.73□□□□□ -1.97
NMD2YHR077C ARG80P07249 177 aa2.73□□□□□ -1.97
NMD2YHR077C PUT1P09368 476 aa2.73□□□□□ -1.97
NMD2YHR077C RPL20AP0CX23 172 aaKnown RBP2.73□□□□□ -1.97
NMD2YHR077C RPL20BP0CX24 172 aaPredicted RBP2.73□□□□□ -1.97
NMD2YHR077C YCP4P25349 247 aaKnown RBP2.73□□□□□ -1.97
NMD2YHR077C FUN19P28003 413 aaPredicted RBP2.73□□□□□ -1.97
NMD2YHR077C PAU2P32612 120 aa2.73□□□□□ -1.97
NMD2YHR077C OAR1P35731 278 aa2.73□□□□□ -1.97
NMD2YHR077C PEX32P38292 413 aa2.73□□□□□ -1.97
NMD2YHR077C FMC1P40491 155 aa2.73□□□□□ -1.97
NMD2YHR077C YIL086CP40503 102 aa2.73□□□□□ -1.97
NMD2YHR077C NAS2P40555 220 aa2.73□□□□□ -1.97
NMD2YHR077C BUD8P41698 603 aa2.73□□□□□ -1.97
NMD2YHR077C YNR062CP53748 327 aa2.73□□□□□ -1.97
NMD2YHR077C NCE101Q02820 53 aa2.73□□□□□ -1.97
NMD2YHR077C RRP9Q06506 573 aaKnown RBP2.73□□□□□ -1.97
NMD2YHR077C ASR1Q06834 288 aa2.73□□□□□ -1.97
NMD2YHR077C HEM25Q07534 307 aa2.73□□□□□ -1.97
NMD2YHR077C FMP40Q08968 688 aaPredicted RBP2.73□□□□□ -1.97
NMD2YHR077C TY1A-BLQ12266 440 aa2.73□□□□□ -1.97
NMD2YHR077C FRE7Q12333 620 aa2.73□□□□□ -1.97
NMD2YHR077C SFG1Q12507 346 aa2.73□□□□□ -1.97
NMD2YHR077C YLR099W-AQ3E798 87 aa2.73□□□□□ -1.97
NMD2YHR077C GLT1Q12680 2145 aaKnown RBP2.72□□□□□ -1.97
NMD2YHR077C SEC12P11655 471 aa2.72□□□□□ -1.97
NMD2YHR077C SPT15P13393 240 aaKnown RBP2.72□□□□□ -1.97
NMD2YHR077C STE12P13574 688 aa2.72□□□□□ -1.97
NMD2YHR077C SCO1P23833 295 aa2.72□□□□□ -1.97
NMD2YHR077C PUT3P25502 979 aaPredicted RBP2.72□□□□□ -1.97
NMD2YHR077C ASF2P32448 525 aaPredicted RBP2.72□□□□□ -1.97
NMD2YHR077C HYM1P32464 399 aa2.72□□□□□ -1.97
NMD2YHR077C SRB5P32585 307 aa2.72□□□□□ -1.97
NMD2YHR077C TMA19P35691 167 aaKnown RBP2.72□□□□□ -1.97
NMD2YHR077C YBR242WP38331 238 aa2.72□□□□□ -1.97
NMD2YHR077C PRP39P39682 629 aaKnown RBP2.72□□□□□ -1.97
NMD2YHR077C HPA3P39979 161 aa2.72□□□□□ -1.97
NMD2YHR077C ALB1P47019 175 aaPredicted RBP2.72□□□□□ -1.97
NMD2YHR077C APS3P47064 194 aa2.72□□□□□ -1.97
NMD2YHR077C COS10P52924 374 aa2.72□□□□□ -1.97
NMD2YHR077C YGL101WP53144 215 aa2.72□□□□□ -1.97
NMD2YHR077C YGR067CP53243 804 aa2.72□□□□□ -1.97
NMD2YHR077C SAY1P53324 424 aa2.72□□□□□ -1.97
NMD2YHR077C BUD25P85052 153 aa2.72□□□□□ -1.97
NMD2YHR077C MRPL1Q04599 285 aa2.72□□□□□ -1.97
NMD2YHR077C MFB1Q04922 465 aa2.72□□□□□ -1.97
NMD2YHR077C COX20Q04935 205 aa2.72□□□□□ -1.97
NMD2YHR077C HDA2Q06629 674 aa2.72□□□□□ -1.97
NMD2YHR077C YPR091CQ06833 770 aa2.72□□□□□ -1.97
NMD2YHR077C SYO1Q07395 620 aa2.72□□□□□ -1.97
NMD2YHR077C AVO1Q08236 1176 aa2.72□□□□□ -1.97
NMD2YHR077C PSF1Q12488 208 aa2.72□□□□□ -1.97
NMD2YHR077C BRR2P32639 2163 aaKnown RBP2.72□□□□□ -1.97
NMD2YHR077C FUS1P11710 512 aa2.72□□□□□ -1.97
NMD2YHR077C RPB8P20436 146 aa2.72□□□□□ -1.97
NMD2YHR077C GPI12P23797 304 aa2.72□□□□□ -1.97
NMD2YHR077C NFS1P25374 497 aa2.72□□□□□ -1.97
NMD2YHR077C PRE2P30656 287 aaKnown RBP2.72□□□□□ -1.97
NMD2YHR077C PAD1P33751 242 aaKnown RBP RIP-Chip data2.72□□□□□ -1.97not detected
NMD2YHR077C MKS1P34072 584 aa2.72□□□□□ -1.97
NMD2YHR077C MRPS18P42847 217 aa2.72□□□□□ -1.97
NMD2YHR077C YGL204CP53089 101 aa2.72□□□□□ -1.97
NMD2YHR077C YIP4P53093 235 aa2.72□□□□□ -1.97
NMD2YHR077C YGR012WP53206 393 aa2.72□□□□□ -1.97
NMD2YHR077C MNT4P53745 580 aa2.72□□□□□ -1.97
NMD2YHR077C NRG1Q03125 231 aa2.72□□□□□ -1.97
NMD2YHR077C AGE1Q04412 482 aa2.72□□□□□ -1.97
NMD2YHR077C UTP21Q06078 939 aaPredicted RBP2.72□□□□□ -1.97
NMD2YHR077C RDR1Q08904 546 aa2.72□□□□□ -1.97
NMD2YHR077C PIN2Q12057 282 aa2.72□□□□□ -1.97
NMD2YHR077C DAT1P13483 248 aaKnown RBP2.71□□□□□ -1.98
NMD2YHR077C PDA1P16387 420 aaKnown RBP2.71□□□□□ -1.98
NMD2YHR077C BOS1P25385 244 aa2.71□□□□□ -1.98
NMD2YHR077C AHC2P25649 128 aa2.71□□□□□ -1.98
NMD2YHR077C FAA1P30624 700 aaKnown RBP2.71□□□□□ -1.98
NMD2YHR077C FUN26P31381 517 aa2.71□□□□□ -1.98
NMD2YHR077C RNP1P32385 249 aa2.71□□□□□ -1.98
NMD2YHR077C EMP70P32802 667 aa2.71□□□□□ -1.98
NMD2YHR077C JEN1P36035 616 aa2.71□□□□□ -1.98
NMD2YHR077C EHT1P38295 451 aa2.71□□□□□ -1.98
NMD2YHR077C SDS24P38314 527 aa2.71□□□□□ -1.98
NMD2YHR077C YBR238CP38330 731 aaKnown RBP2.71□□□□□ -1.98
NMD2YHR077C LEU5P38702 357 aa2.71□□□□□ -1.98
NMD2YHR077C YHR122WP38829 231 aa2.71□□□□□ -1.98
NMD2YHR077C ELO1P39540 310 aa2.71□□□□□ -1.98
NMD2YHR077C YGR066CP53242 292 aa2.71□□□□□ -1.98
NMD2YHR077C INN1P53901 409 aa2.71□□□□□ -1.98
NMD2YHR077C NAM8Q00539 523 aaKnown RBP2.71□□□□□ -1.98
NMD2YHR077C DML1Q03652 475 aa2.71□□□□□ -1.98
NMD2YHR077C SSY1Q03770 852 aa2.71□□□□□ -1.98
NMD2YHR077C SPC19Q03954 165 aa2.71□□□□□ -1.98
NMD2YHR077C YLR283WQ05867 314 aa2.71□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 62.4 ms