RNA–Protein interactions for RNA: YGR140W

CBF2, Transcript of Essential kinetochore protein, yeastyeast

Gene CBF2, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF2YGR140W LEU5P38702 357 aa2.02□□□□□ -2.09
CBF2YGR140W UTP18P40362 594 aaPredicted RBP2.02□□□□□ -2.09
CBF2YGR140W WWM1P43582 211 aaKnown RBP2.02□□□□□ -2.09
CBF2YGR140W PMT4P46971 762 aa2.02□□□□□ -2.09
CBF2YGR140W ASG7P46993 209 aa2.02□□□□□ -2.09
CBF2YGR140W MDV1P47025 714 aa2.02□□□□□ -2.09
CBF2YGR140W USE1P53146 245 aa2.02□□□□□ -2.09
CBF2YGR140W IBD2P53892 351 aa2.02□□□□□ -2.09
CBF2YGR140W YDL144CQ07589 356 aa2.02□□□□□ -2.09
CBF2YGR140W SMC5Q08204 1093 aa2.02□□□□□ -2.09
CBF2YGR140W MSL5Q12186 476 aaKnown RBP RIP-Chip data2.02□□□□□ -2.09not detected
CBF2YGR140W JIP3O13555 125 aa2.02□□□□□ -2.09
CBF2YGR140W TUB1P09733 447 aaKnown RBP2.02□□□□□ -2.09
CBF2YGR140W FBA1P14540 359 aaKnown RBP2.02□□□□□ -2.09
CBF2YGR140W DEP1P31385 405 aa2.02□□□□□ -2.09
CBF2YGR140W MRPL6P32904 214 aa2.02□□□□□ -2.09
CBF2YGR140W VPS21P36017 210 aaKnown RBP2.02□□□□□ -2.09
CBF2YGR140W PMU1P36069 295 aa2.02□□□□□ -2.09
CBF2YGR140W SDS24P38314 527 aa2.02□□□□□ -2.09
CBF2YGR140W NDT80P38830 627 aa2.02□□□□□ -2.09
CBF2YGR140W FRT2P39734 528 aa2.02□□□□□ -2.09
CBF2YGR140W HAT2P39984 401 aa2.02□□□□□ -2.09
CBF2YGR140W ERG28P40030 148 aa2.02□□□□□ -2.09
CBF2YGR140W OST1P41543 476 aaKnown RBP2.02□□□□□ -2.09
CBF2YGR140W HAC1P41546 238 aa2.02□□□□□ -2.09
CBF2YGR140W DIM1P41819 318 aaKnown RBP2.02□□□□□ -2.09
CBF2YGR140W SAD1P43589 448 aa2.02□□□□□ -2.09
CBF2YGR140W GLG2P47011 380 aa2.02□□□□□ -2.09
CBF2YGR140W SCS3P53012 380 aa2.02□□□□□ -2.09
CBF2YGR140W YNL247WP53852 767 aaKnown RBP2.02□□□□□ -2.09
CBF2YGR140W MTQ1P53944 314 aa2.02□□□□□ -2.09
CBF2YGR140W REX2P54964 269 aaKnown RBP2.02□□□□□ -2.09
CBF2YGR140W NUP116Q02630 1113 aa2.02□□□□□ -2.09
CBF2YGR140W DIB1Q06819 143 aaPredicted RBP2.02□□□□□ -2.09
CBF2YGR140W RDL2Q08742 149 aaKnown RBP2.02□□□□□ -2.09
CBF2YGR140W GPM2Q12008 311 aa2.02□□□□□ -2.09
CBF2YGR140W ATX2Q12067 313 aa2.02□□□□□ -2.09
CBF2YGR140W RPL20AP0CX23 172 aaKnown RBP2.01□□□□□ -2.09
CBF2YGR140W RPL20BP0CX24 172 aaPredicted RBP2.01□□□□□ -2.09
CBF2YGR140W TCP1P12612 559 aaKnown RBP2.01□□□□□ -2.09
CBF2YGR140W ATP7P30902 174 aa2.01□□□□□ -2.09
CBF2YGR140W GDH2P33327 1092 aaKnown RBP2.01□□□□□ -2.09
CBF2YGR140W ANR2P36090 516 aaPredicted RBP2.01□□□□□ -2.09
CBF2YGR140W PRE6P40303 254 aaKnown RBP2.01□□□□□ -2.09
CBF2YGR140W SLM1P40485 686 aa2.01□□□□□ -2.09
CBF2YGR140W PSA1P41940 361 aaKnown RBP2.01□□□□□ -2.09
CBF2YGR140W YCH1P42937 148 aa2.01□□□□□ -2.09
CBF2YGR140W LCB3P47013 409 aa2.01□□□□□ -2.09
CBF2YGR140W HSH155P49955 971 aaKnown RBP2.01□□□□□ -2.09
CBF2YGR140W GOR1P53839 350 aa2.01□□□□□ -2.09
CBF2YGR140W RHO3Q00245 231 aaKnown RBP2.01□□□□□ -2.09
CBF2YGR140W MRS2Q01926 470 aa2.01□□□□□ -2.09
CBF2YGR140W VBA1Q04301 562 aa2.01□□□□□ -2.09
CBF2YGR140W GIM5Q04493 163 aa2.01□□□□□ -2.09
CBF2YGR140W YMR254CQ04838 102 aa2.01□□□□□ -2.09
CBF2YGR140W YLR281CQ05863 155 aa2.01□□□□□ -2.09
CBF2YGR140W SFH1Q06168 426 aa2.01□□□□□ -2.09
CBF2YGR140W CDD1Q06549 142 aa2.01□□□□□ -2.09
CBF2YGR140W OSW1Q08692 278 aa2.01□□□□□ -2.09
CBF2YGR140W DSE3Q08729 430 aa2.01□□□□□ -2.09
CBF2YGR140W CSM4Q08955 156 aa2.01□□□□□ -2.09
CBF2YGR140W PNS1Q12412 539 aa2.01□□□□□ -2.09
CBF2YGR140W LAG2Q92325 660 aa2.01□□□□□ -2.09
CBF2YGR140W STH1P32597 1359 aa2.01□□□□□ -2.09
CBF2YGR140W CPR1P14832 162 aaKnown RBP2.01□□□□□ -2.09
CBF2YGR140W HEM15P16622 393 aa2.01□□□□□ -2.09
CBF2YGR140W RPS5P26783 225 aaKnown RBP2.01□□□□□ -2.09
CBF2YGR140W TPS2P31688 896 aaKnown RBP2.01□□□□□ -2.09
CBF2YGR140W SPT4P32914 102 aaPredicted RBP2.01□□□□□ -2.09
CBF2YGR140W YBP1P38315 674 aa2.01□□□□□ -2.09
CBF2YGR140W RCK2P38623 610 aa2.01□□□□□ -2.09
CBF2YGR140W GUF1P46943 645 aa2.01□□□□□ -2.09
CBF2YGR140W ABM1P47146 123 aa2.01□□□□□ -2.09
CBF2YGR140W CWC23P52868 283 aaPredicted RBP2.01□□□□□ -2.09
CBF2YGR140W PEX31P53203 462 aa2.01□□□□□ -2.09
CBF2YGR140W MHR1Q06630 226 aa2.01□□□□□ -2.09
CBF2YGR140W HEM25Q07534 307 aa2.01□□□□□ -2.09
CBF2YGR140W PLB3Q08108 686 aa2.01□□□□□ -2.09
CBF2YGR140W RRS1Q08746 203 aaKnown RBP2.01□□□□□ -2.09
CBF2YGR140W JLP1Q12358 412 aa2.01□□□□□ -2.09
CBF2YGR140W YKL183C-AQ3E765 70 aa2.01□□□□□ -2.09
CBF2YGR140W MHP1P43638 1398 aa2.01□□□□□ -2.09
CBF2YGR140W TFS1P14306 219 aa2□□□□□ -2.09
CBF2YGR140W SNF6P18888 332 aa2□□□□□ -2.09
CBF2YGR140W CMK2P22517 447 aa2□□□□□ -2.09
CBF2YGR140W IFM1P25038 676 aa2□□□□□ -2.09
CBF2YGR140W POF1P25576 258 aa2□□□□□ -2.09
CBF2YGR140W SGE1P33335 543 aa2□□□□□ -2.09
CBF2YGR140W DRE2P36152 348 aa2□□□□□ -2.09
CBF2YGR140W MRX3P38172 270 aa2□□□□□ -2.09
CBF2YGR140W FZO1P38297 855 aa2□□□□□ -2.09
CBF2YGR140W SUR2P38992 349 aa2□□□□□ -2.09
CBF2YGR140W GDS1P41913 522 aa2□□□□□ -2.09
CBF2YGR140W RPC17P47076 161 aa2□□□□□ -2.09
CBF2YGR140W NBP1P52919 319 aaPredicted RBP2□□□□□ -2.09
CBF2YGR140W EBS1Q03466 884 aaKnown RBP2□□□□□ -2.09
CBF2YGR140W RRP17Q04031 235 aaPredicted RBP2□□□□□ -2.09
CBF2YGR140W YET2Q04210 160 aa2□□□□□ -2.09
CBF2YGR140W ATG17Q06410 417 aa2□□□□□ -2.09
CBF2YGR140W YLR012CQ07927 99 aa2□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 68.1 ms