RNA–Protein interactions for RNA: YGR048W

UFD1, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene UFD1, Length 1,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD1YGR048W EFG1Q3E705 233 aaKnown RBP7.51□□□□□ -1.21
UFD1YGR048W PNO1Q99216 274 aaKnown RBP7.51□□□□□ -1.21
UFD1YGR048W RPL9AP05738 191 aaKnown RBP7.5□□□□□ -1.21
UFD1YGR048W HAP2P06774 265 aa7.5□□□□□ -1.21
UFD1YGR048W ADH3P07246 375 aaKnown RBP7.5□□□□□ -1.21
UFD1YGR048W FBP1P09201 348 aa7.5□□□□□ -1.21
UFD1YGR048W SEC62P21825 274 aa7.5□□□□□ -1.21
UFD1YGR048W YCR099CP25657 155 aa7.5□□□□□ -1.21
UFD1YGR048W EHD3P28817 500 aa7.5□□□□□ -1.21
UFD1YGR048W SFK1P35735 353 aa7.5□□□□□ -1.21
UFD1YGR048W VBA5P36172 582 aa7.5□□□□□ -1.21
UFD1YGR048W ASC1P38011 319 aaKnown RBP7.5□□□□□ -1.21
UFD1YGR048W SRO77P38163 1010 aa7.5□□□□□ -1.21
UFD1YGR048W POP8P38208 133 aa7.5□□□□□ -1.21
UFD1YGR048W EHT1P38295 451 aa7.5□□□□□ -1.21
UFD1YGR048W MTC4P38335 694 aaKnown RBP7.5□□□□□ -1.21
UFD1YGR048W YPT31P38555 223 aaKnown RBP7.5□□□□□ -1.21
UFD1YGR048W HSE1P38753 452 aa7.5□□□□□ -1.21
UFD1YGR048W SFB3P38810 929 aa7.5□□□□□ -1.21
UFD1YGR048W ASP1P38986 381 aaPredicted RBP7.5□□□□□ -1.21
UFD1YGR048W VAB2P40003 282 aa7.5□□□□□ -1.21
UFD1YGR048W FAU1P40099 211 aa7.5□□□□□ -1.21
UFD1YGR048W GAB1P41733 394 aa7.5□□□□□ -1.21
UFD1YGR048W NUP57P48837 541 aa7.5□□□□□ -1.21
UFD1YGR048W RPL9BP51401 191 aaKnown RBP7.5□□□□□ -1.21
UFD1YGR048W YNR014WP53719 212 aa7.5□□□□□ -1.21
UFD1YGR048W GPI15P53961 229 aa7.5□□□□□ -1.21
UFD1YGR048W SAE3P89114 91 aa7.5□□□□□ -1.21
UFD1YGR048W MSC1Q03104 513 aa7.5□□□□□ -1.21
UFD1YGR048W CTK1Q03957 528 aaKnown RBP7.5□□□□□ -1.21
UFD1YGR048W YOR365CQ08844 703 aa7.5□□□□□ -1.21
UFD1YGR048W YOL114CQ12322 202 aa7.5□□□□□ -1.21
UFD1YGR048W YMR084WA2P2R3 262 aa7.49□□□□□ -1.21
UFD1YGR048W YOL163WP0CF20 169 aa7.49□□□□□ -1.21
UFD1YGR048W PDX1P16451 410 aa7.49□□□□□ -1.21
UFD1YGR048W RRP7P25368 297 aaPredicted RBP7.49□□□□□ -1.21
UFD1YGR048W CDC12P32468 407 aaKnown RBP7.49□□□□□ -1.21
UFD1YGR048W SUA5P32579 426 aa7.49□□□□□ -1.21
UFD1YGR048W SNC2P33328 115 aa7.49□□□□□ -1.21
UFD1YGR048W SOF1P33750 489 aaKnown RBP7.49□□□□□ -1.21
UFD1YGR048W MOT2P34909 587 aaKnown RBP7.49□□□□□ -1.21
UFD1YGR048W NDT80P38830 627 aa7.49□□□□□ -1.21
UFD1YGR048W PHO90P39535 881 aa7.49□□□□□ -1.21
UFD1YGR048W ACF4P47129 309 aa7.49□□□□□ -1.21
UFD1YGR048W TAF4P50105 388 aa7.49□□□□□ -1.21
UFD1YGR048W YGL101WP53144 215 aa7.49□□□□□ -1.21
UFD1YGR048W IBD2P53892 351 aa7.49□□□□□ -1.21
UFD1YGR048W TPS1Q00764 495 aaKnown RBP7.49□□□□□ -1.21
UFD1YGR048W VBA4Q04602 768 aaKnown RBP7.49□□□□□ -1.21
UFD1YGR048W TVP18Q04767 167 aa7.49□□□□□ -1.21
UFD1YGR048W MRI1Q06489 411 aaKnown RBP7.49□□□□□ -1.21
UFD1YGR048W MRL1Q06815 381 aa7.49□□□□□ -1.21
UFD1YGR048W UBX3Q12229 455 aa7.49□□□□□ -1.21
UFD1YGR048W NDJ1Q12366 352 aa7.49□□□□□ -1.21
UFD1YGR048W AHC1Q12433 566 aa7.49□□□□□ -1.21
UFD1YGR048W AHA1Q12449 350 aaKnown RBP7.49□□□□□ -1.21
UFD1YGR048W RPP2AP05319 106 aaKnown RBP7.48□□□□□ -1.21
UFD1YGR048W PUT1P09368 476 aa7.48□□□□□ -1.21
UFD1YGR048W MSK1P32048 576 aa7.48□□□□□ -1.21
UFD1YGR048W YEF1P32622 495 aa7.48□□□□□ -1.21
UFD1YGR048W COT1P32798 439 aa7.48□□□□□ -1.21
UFD1YGR048W YPT7P32939 208 aa7.48□□□□□ -1.21
UFD1YGR048W IRS4P36115 615 aaKnown RBP7.48□□□□□ -1.21
UFD1YGR048W GMH1P36125 273 aa7.48□□□□□ -1.21
UFD1YGR048W MRPL4P36517 319 aa7.48□□□□□ -1.21
UFD1YGR048W RRN10P38204 145 aa7.48□□□□□ -1.21
UFD1YGR048W LRP1P38801 184 aaKnown RBP7.48□□□□□ -1.21
UFD1YGR048W CHS7P38843 316 aa7.48□□□□□ -1.21
UFD1YGR048W GET2P40056 285 aa7.48□□□□□ -1.21
UFD1YGR048W GAT2P40209 560 aa7.48□□□□□ -1.21
UFD1YGR048W FKH2P41813 862 aa7.48□□□□□ -1.21
UFD1YGR048W RRT5P43607 289 aa7.48□□□□□ -1.21
UFD1YGR048W DPB11P47027 764 aaPredicted RBP7.48□□□□□ -1.21
UFD1YGR048W YJR012CP47087 207 aa7.48□□□□□ -1.21
UFD1YGR048W SSU72P53538 206 aaPredicted RBP7.48□□□□□ -1.21
UFD1YGR048W DUS1P53759 423 aaKnown RBP7.48□□□□□ -1.21
UFD1YGR048W IGO1P53897 168 aa7.48□□□□□ -1.21
UFD1YGR048W NRK1P53915 240 aa7.48□□□□□ -1.21
UFD1YGR048W CYT2Q00873 224 aa7.48□□□□□ -1.21
UFD1YGR048W AAT1Q01802 451 aa7.48□□□□□ -1.21
UFD1YGR048W TDA6Q06466 467 aa7.48□□□□□ -1.21
UFD1YGR048W SNA4Q07549 140 aa7.48□□□□□ -1.21
UFD1YGR048W AIM6Q07716 390 aa7.48□□□□□ -1.21
UFD1YGR048W YOP1Q12402 180 aa7.48□□□□□ -1.21
UFD1YGR048W ADH2P00331 348 aaKnown RBP7.47□□□□□ -1.21
UFD1YGR048W CAN1P04817 590 aa7.47□□□□□ -1.21
UFD1YGR048W RPC40P07703 335 aaKnown RBP7.47□□□□□ -1.21
UFD1YGR048W SGA1P08019 549 aa7.47□□□□□ -1.21
UFD1YGR048W UNG1P12887 359 aa7.47□□□□□ -1.21
UFD1YGR048W SPO7P18410 259 aa7.47□□□□□ -1.21
UFD1YGR048W SAM2P19358 384 aaKnown RBP7.47□□□□□ -1.21
UFD1YGR048W HOP1P20050 605 aa7.47□□□□□ -1.21
UFD1YGR048W PET18P25362 215 aa7.47□□□□□ -1.21
UFD1YGR048W LAC1P28496 418 aa7.47□□□□□ -1.21
UFD1YGR048W MSN4P33749 630 aa7.47□□□□□ -1.21
UFD1YGR048W SKT5P34226 696 aa7.47□□□□□ -1.21
UFD1YGR048W YBR197CP38306 217 aa7.47□□□□□ -1.21
UFD1YGR048W SRP68P38687 599 aaKnown RBP7.47□□□□□ -1.21
UFD1YGR048W HTD2P38790 280 aaKnown RBP7.47□□□□□ -1.21
UFD1YGR048W PRM9P39551 298 aa7.47□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 24.8 ms