RNA–Protein interactions for RNA: YDR432W

NPL3, Transcript of RNA-binding protein, yeast

Gene NPL3, Length 1,245 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NPL3	YDR432W	AHP1	P38013	176 aa	Known RBP	11.18	□□□□□ -0.62
NPL3	YDR432W	ELA1	P53861	379 aa	Predicted RBP	11.18	□□□□□ -0.62
NPL3	YDR432W	SKI7	Q08491	747 aa	Predicted RBP	11.18	□□□□□ -0.62
NPL3	YDR432W	ASF2	P32448	525 aa	Predicted RBP	11.17	□□□□□ -0.62
NPL3	YDR432W	ARC19	P33204	171 aa	Known RBP	11.17	□□□□□ -0.62
NPL3	YDR432W	YKL187C	P34231	750 aa		11.17	□□□□□ -0.62
NPL3	YDR432W	AIM3	P38266	947 aa	Known RBP	11.17	□□□□□ -0.62
NPL3	YDR432W	PRE6	P40303	254 aa	Known RBP	11.17	□□□□□ -0.62
NPL3	YDR432W	GDS1	P41913	522 aa		11.17	□□□□□ -0.62
NPL3	YDR432W	ACS2	P52910	683 aa	Known RBP	11.17	□□□□□ -0.62
NPL3	YDR432W	YGL235W	P53071	178 aa		11.17	□□□□□ -0.62
NPL3	YDR432W	RVB1	Q03940	463 aa	Known RBP	11.17	□□□□□ -0.62
NPL3	YDR432W	SRO77	P38163	1010 aa		11.16	□□□□□ -0.62
NPL3	YDR432W	YBR220C	P38318	560 aa		11.16	□□□□□ -0.62
NPL3	YDR432W	CTF8	P38877	133 aa		11.16	□□□□□ -0.62
NPL3	YDR432W	KRE29	P40026	464 aa		11.16	□□□□□ -0.62
NPL3	YDR432W	YGR168C	P53293	376 aa		11.16	□□□□□ -0.62
NPL3	YDR432W	RIB3	Q99258	208 aa		11.16	□□□□□ -0.62
NPL3	YDR432W	HAP4	P14064	554 aa		11.15	□□□□□ -0.62
NPL3	YDR432W	YCR100C	P25606	316 aa		11.15	□□□□□ -0.62
NPL3	YDR432W	THI4	P32318	326 aa		11.15	□□□□□ -0.62
NPL3	YDR432W	MCM10	P32354	571 aa		11.15	□□□□□ -0.62
NPL3	YDR432W	PPG1	P32838	368 aa		11.15	□□□□□ -0.62
NPL3	YDR432W	ALP1	P38971	573 aa		11.15	□□□□□ -0.62
NPL3	YDR432W	GDI1	P39958	451 aa	Known RBP	11.15	□□□□□ -0.62
NPL3	YDR432W	QRI1	P43123	477 aa	Known RBP	11.15	□□□□□ -0.62
NPL3	YDR432W	MOB2	P43563	287 aa		11.15	□□□□□ -0.62
NPL3	YDR432W	HMS2	P47175	358 aa		11.15	□□□□□ -0.62
NPL3	YDR432W	RPL6A	Q02326	176 aa	Known RBP	11.15	□□□□□ -0.62
NPL3	YDR432W	RTC5	Q12108	567 aa	Known RBP	11.15	□□□□□ -0.62
NPL3	YDR432W	RPB8	P20436	146 aa		11.14	□□□□□ -0.63
NPL3	YDR432W	RRP7	P25368	297 aa	Predicted RBP	11.14	□□□□□ -0.63
NPL3	YDR432W	YKL071W	P36086	256 aa		11.14	□□□□□ -0.63
NPL3	YDR432W	ECM8	P38246	354 aa		11.14	□□□□□ -0.63
NPL3	YDR432W	FET3	P38993	636 aa		11.14	□□□□□ -0.63
NPL3	YDR432W	BAT2	P47176	376 aa	Known RBP	11.14	□□□□□ -0.63
NPL3	YDR432W	RCE1	Q03530	315 aa		11.14	□□□□□ -0.63
NPL3	YDR432W	YAP6	Q03935	383 aa		11.14	□□□□□ -0.63
NPL3	YDR432W	RPL35A	P0CX84	120 aa	Known RBP	11.13	□□□□□ -0.63
NPL3	YDR432W	RPL35B	P0CX85	120 aa	Known RBP	11.13	□□□□□ -0.63
NPL3	YDR432W	DBF20	P32328	564 aa		11.13	□□□□□ -0.63
NPL3	YDR432W	YBR285W	P38354	144 aa		11.13	□□□□□ -0.63
NPL3	YDR432W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	11.13	□□□□□ -0.63	not detected
NPL3	YDR432W	MOT3	P54785	490 aa	Known RBP	11.13	□□□□□ -0.63
NPL3	YDR432W	SMP3	Q04174	516 aa		11.13	□□□□□ -0.63
NPL3	YDR432W	SNT309	Q06091	175 aa	Predicted RBP	11.13	□□□□□ -0.63
NPL3	YDR432W	TMC1	Q08422	150 aa	Predicted RBP	11.13	□□□□□ -0.63
NPL3	YDR432W	SEC12	P11655	471 aa		11.12	□□□□□ -0.63
NPL3	YDR432W	EXG1	P23776	448 aa	Known RBP	11.12	□□□□□ -0.63
NPL3	YDR432W	CLB2	P24869	491 aa		11.12	□□□□□ -0.63
NPL3	YDR432W	CAM1	P29547	415 aa	Known RBP	11.12	□□□□□ -0.63
NPL3	YDR432W	YKL077W	P36081	392 aa		11.12	□□□□□ -0.63
NPL3	YDR432W	PDS1	P40316	373 aa	Predicted RBP	11.12	□□□□□ -0.63
NPL3	YDR432W	GVP36	P40531	326 aa	Known RBP	11.12	□□□□□ -0.63
NPL3	YDR432W	YNR062C	P53748	327 aa		11.12	□□□□□ -0.63
NPL3	YDR432W	MRP51	Q02950	344 aa		11.12	□□□□□ -0.63
NPL3	YDR432W	TFB3	Q03290	321 aa		11.12	□□□□□ -0.63
NPL3	YDR432W	YPR015C	Q12531	247 aa		11.12	□□□□□ -0.63
NPL3	YDR432W	YHR214C-E	Q8TGK0	99 aa		11.12	□□□□□ -0.63
NPL3	YDR432W	SPO7	P18410	259 aa		11.11	□□□□□ -0.63
NPL3	YDR432W	FAR1	P21268	830 aa		11.11	□□□□□ -0.63
NPL3	YDR432W	BUD5	P25300	642 aa	Predicted RBP	11.11	□□□□□ -0.63
NPL3	YDR432W	NIC96	P34077	839 aa		11.11	□□□□□ -0.63
NPL3	YDR432W	SIC1	P38634	284 aa		11.11	□□□□□ -0.63
NPL3	YDR432W	IDS2	P46958	469 aa		11.11	□□□□□ -0.63
NPL3	YDR432W	SIP18	P50263	79 aa		11.11	□□□□□ -0.63
NPL3	YDR432W	SCY1	P53009	804 aa		11.11	□□□□□ -0.63
NPL3	YDR432W	SSY1	Q03770	852 aa		11.11	□□□□□ -0.63
NPL3	YDR432W	YDL176W	Q12027	708 aa		11.11	□□□□□ -0.63
NPL3	YDR432W	MED2	Q12124	431 aa		11.11	□□□□□ -0.63
NPL3	YDR432W	YOL162W	P0CF19	215 aa		11.1	□□□□□ -0.63
NPL3	YDR432W	DTR1	P38125	572 aa		11.1	□□□□□ -0.63
NPL3	YDR432W	YBR138C	P38277	524 aa		11.1	□□□□□ -0.63
NPL3	YDR432W	SBE22	P38814	852 aa		11.1	□□□□□ -0.63
NPL3	YDR432W	MPH1	P40562	993 aa		11.1	□□□□□ -0.63
NPL3	YDR432W	MDE1	P47095	244 aa		11.1	□□□□□ -0.63
NPL3	YDR432W	COS1	P53822	381 aa		11.1	□□□□□ -0.63
NPL3	YDR432W	TEX1	P53851	422 aa	Known RBP	11.1	□□□□□ -0.63
NPL3	YDR432W	GEP5	Q12393	293 aa		11.1	□□□□□ -0.63
NPL3	YDR432W	PRP28	P23394	588 aa		11.09	□□□□□ -0.63
NPL3	YDR432W	PRP19	P32523	503 aa	Known RBP	11.09	□□□□□ -0.63
NPL3	YDR432W	RPP1	P38786	293 aa		11.09	□□□□□ -0.63
NPL3	YDR432W	YER084W	P40057	128 aa		11.09	□□□□□ -0.63
NPL3	YDR432W	YIL012W	P40551	113 aa		11.09	□□□□□ -0.63
NPL3	YDR432W	ABZ2	Q03266	374 aa		11.09	□□□□□ -0.63
NPL3	YDR432W	DML1	Q03652	475 aa		11.09	□□□□□ -0.63
NPL3	YDR432W	YLR040C	Q07988	224 aa		11.09	□□□□□ -0.63
NPL3	YDR432W	SPC3	Q12133	184 aa		11.09	□□□□□ -0.63
NPL3	YDR432W	YPL119C-A	Q3E751	87 aa		11.09	□□□□□ -0.63
NPL3	YDR432W	URA2	P07259	2214 aa	Known RBP	11.09	□□□□□ -0.63
NPL3	YDR432W	URE2	P23202	354 aa	Known RBP	11.08	□□□□□ -0.64
NPL3	YDR432W	CNA1	P23287	553 aa		11.08	□□□□□ -0.64
NPL3	YDR432W	GIT1	P25346	518 aa		11.08	□□□□□ -0.64
NPL3	YDR432W	SSE2	P32590	693 aa	Known RBP	11.08	□□□□□ -0.64
NPL3	YDR432W	RRG9	P40156	214 aa		11.08	□□□□□ -0.64
NPL3	YDR432W	QRI7	P43122	407 aa		11.08	□□□□□ -0.64
NPL3	YDR432W	IRC7	P43623	340 aa		11.08	□□□□□ -0.64
NPL3	YDR432W	GRX5	Q02784	150 aa		11.08	□□□□□ -0.64
NPL3	YDR432W	RSM28	Q03430	361 aa		11.08	□□□□□ -0.64
NPL3	YDR432W	SNO4	Q04902	237 aa		11.08	□□□□□ -0.64

Retrieved 100 of 5,963 RNA–protein pairs in 25.8 ms