RNA–Protein interactions for RNA: YDR379C-A

SDH6, Transcript of Mitochondrial protein involved in assembly of succinate dehydrogenase, yeastyeast

Gene SDH6, Length 240 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDH6YDR379C-A KTI12P34253 313 aaKnown RBP0.09□□□□□ -2.4
SDH6YDR379C-A YOR062CP36025 268 aa0.09□□□□□ -2.4
SDH6YDR379C-A AIM29P36154 155 aa0.09□□□□□ -2.4
SDH6YDR379C-A SPP381P38282 291 aaPredicted RBP0.09□□□□□ -2.4
SDH6YDR379C-A YER135CP40082 130 aa0.09□□□□□ -2.4
SDH6YDR379C-A UTP25P40498 721 aaKnown RBP0.09□□□□□ -2.4
SDH6YDR379C-A MRPL49P40858 161 aaPredicted RBP0.09□□□□□ -2.4
SDH6YDR379C-A YGR266WP53326 701 aa0.09□□□□□ -2.4
SDH6YDR379C-A OSH6Q02201 448 aa0.09□□□□□ -2.4
SDH6YDR379C-A MEH1Q02205 184 aa0.09□□□□□ -2.4
SDH6YDR379C-A MZM1Q03429 123 aaPredicted RBP0.09□□□□□ -2.4
SDH6YDR379C-A SMP3Q04174 516 aa0.09□□□□□ -2.4
SDH6YDR379C-A GRH1Q04410 372 aaKnown RBP0.09□□□□□ -2.4
SDH6YDR379C-A APC5Q08683 685 aa0.09□□□□□ -2.4
SDH6YDR379C-A AGC1Q12482 902 aa0.09□□□□□ -2.4
SDH6YDR379C-A PRM4Q12498 284 aa0.09□□□□□ -2.4
SDH6YDR379C-A SRN2Q99176 213 aa0.09□□□□□ -2.4
SDH6YDR379C-A YOL162WP0CF19 215 aa0.08□□□□□ -2.4
SDH6YDR379C-A ARF2P19146 181 aaKnown RBP0.08□□□□□ -2.4
SDH6YDR379C-A ATG15P25641 520 aa0.08□□□□□ -2.4
SDH6YDR379C-A MSK1P32048 576 aa0.08□□□□□ -2.4
SDH6YDR379C-A BUD2P33314 1104 aa0.08□□□□□ -2.4
SDH6YDR379C-A MRPS5P33759 307 aa0.08□□□□□ -2.4
SDH6YDR379C-A COY1P34237 679 aa0.08□□□□□ -2.4
SDH6YDR379C-A MYO3P36006 1272 aa0.08□□□□□ -2.4
SDH6YDR379C-A ATG7P38862 630 aa0.08□□□□□ -2.4
SDH6YDR379C-A PES4P39684 611 aa0.08□□□□□ -2.4
SDH6YDR379C-A COG3P40094 801 aa0.08□□□□□ -2.4
SDH6YDR379C-A LIF1P53150 421 aa0.08□□□□□ -2.4
SDH6YDR379C-A NUP49Q02199 472 aa0.08□□□□□ -2.4
SDH6YDR379C-A CSM3Q04659 317 aa0.08□□□□□ -2.4
SDH6YDR379C-A CTS2Q06350 511 aa0.08□□□□□ -2.4
SDH6YDR379C-A TSR2Q06672 205 aaKnown RBP0.08□□□□□ -2.4
SDH6YDR379C-A YPR078CQ06813 372 aa0.08□□□□□ -2.4
SDH6YDR379C-A MRX9Q07349 420 aaKnown RBP0.08□□□□□ -2.4
SDH6YDR379C-A DTD1Q07648 150 aaKnown RBP0.08□□□□□ -2.4
SDH6YDR379C-A DCI1Q08558 271 aa0.08□□□□□ -2.4
SDH6YDR379C-A YPL245WQ12179 454 aaKnown RBP0.08□□□□□ -2.4
SDH6YDR379C-A YPL247CQ12523 523 aa0.08□□□□□ -2.4
SDH6YDR379C-A YAL063C-AQ3E791 96 aa0.08□□□□□ -2.4
SDH6YDR379C-A CDC7P06243 507 aa0.07□□□□□ -2.4
SDH6YDR379C-A YER188C-AP0C0V2 99 aa0.07□□□□□ -2.4
SDH6YDR379C-A RPS16AP0CX51 143 aaKnown RBP0.07□□□□□ -2.4
SDH6YDR379C-A RPS16BP0CX52 143 aaKnown RBP0.07□□□□□ -2.4
SDH6YDR379C-A MDH1P17505 334 aaKnown RBP RIP-Chip data0.07□□□□□ -2.4not detected
SDH6YDR379C-A DBR1P24309 405 aaKnown RBP0.07□□□□□ -2.4
SDH6YDR379C-A YCR102CP25608 368 aa0.07□□□□□ -2.4
SDH6YDR379C-A ERG9P29704 444 aa0.07□□□□□ -2.4
SDH6YDR379C-A CDC13P32797 924 aaKnown RBP0.07□□□□□ -2.4
SDH6YDR379C-A SUR1P33300 382 aa0.07□□□□□ -2.4
SDH6YDR379C-A SKI2P35207 1287 aaKnown RBP RIP-Chip data0.07□□□□□ -2.4not detected
SDH6YDR379C-A NDE1P40215 560 aa0.07□□□□□ -2.4
SDH6YDR379C-A SYS1P41544 203 aa0.07□□□□□ -2.4
SDH6YDR379C-A ZIM17P42844 174 aa0.07□□□□□ -2.4
SDH6YDR379C-A FYV8P46949 817 aaKnown RBP0.07□□□□□ -2.4
SDH6YDR379C-A YNR066CP53752 436 aa0.07□□□□□ -2.4
SDH6YDR379C-A FCF1Q05498 189 aaPredicted RBP0.07□□□□□ -2.4
SDH6YDR379C-A ARC18Q05933 178 aaKnown RBP0.07□□□□□ -2.4
SDH6YDR379C-A FSH3Q99369 266 aa0.07□□□□□ -2.4
SDH6YDR379C-A REP1P03871 373 aa0.06□□□□□ -2.4
SDH6YDR379C-A SGA1P08019 549 aa0.06□□□□□ -2.4
SDH6YDR379C-A GRR1P24814 1151 aa0.06□□□□□ -2.4
SDH6YDR379C-A PSO2P30620 661 aa0.06□□□□□ -2.4
SDH6YDR379C-A YBL028CP38202 106 aa0.06□□□□□ -2.4
SDH6YDR379C-A MBA1P38300 278 aa0.06□□□□□ -2.4
SDH6YDR379C-A YHL026CP38740 315 aa0.06□□□□□ -2.4
SDH6YDR379C-A MLH1P38920 769 aa0.06□□□□□ -2.4
SDH6YDR379C-A RPL10P41805 221 aaKnown RBP0.06□□□□□ -2.4
SDH6YDR379C-A YJL016WP47072 561 aa0.06□□□□□ -2.4
SDH6YDR379C-A OST3P48439 350 aa0.06□□□□□ -2.4
SDH6YDR379C-A TVP15Q03860 143 aa0.06□□□□□ -2.4
SDH6YDR379C-A SEC13Q04491 297 aaKnown RBP0.06□□□□□ -2.4
SDH6YDR379C-A AIM33Q04516 312 aa0.06□□□□□ -2.4
SDH6YDR379C-A NNT1Q05874 261 aa0.06□□□□□ -2.4
SDH6YDR379C-A YOR268CQ08734 132 aa0.06□□□□□ -2.4
SDH6YDR379C-A VIK1Q12045 647 aa0.06□□□□□ -2.4
SDH6YDR379C-A CDC31P06704 161 aaKnown RBP0.05□□□□□ -2.4
SDH6YDR379C-A RAD7P06779 565 aa0.05□□□□□ -2.4
SDH6YDR379C-A GAL7P08431 366 aa0.05□□□□□ -2.4
SDH6YDR379C-A PDX1P16451 410 aa0.05□□□□□ -2.4
SDH6YDR379C-A DCC1P25559 380 aa0.05□□□□□ -2.4
SDH6YDR379C-A DOA4P32571 926 aa0.05□□□□□ -2.4
SDH6YDR379C-A GCG1P32656 232 aaKnown RBP0.05□□□□□ -2.4
SDH6YDR379C-A MRPL6P32904 214 aa0.05□□□□□ -2.4
SDH6YDR379C-A SFC1P33303 322 aa0.05□□□□□ -2.4
SDH6YDR379C-A YKR045CP36138 183 aa0.05□□□□□ -2.4
SDH6YDR379C-A SPL2P38839 148 aa0.05□□□□□ -2.4
SDH6YDR379C-A PEP8P40335 379 aa0.05□□□□□ -2.4
SDH6YDR379C-A SNL1P40548 159 aa0.05□□□□□ -2.4
SDH6YDR379C-A CAB4P53332 305 aa0.05□□□□□ -2.4
SDH6YDR379C-A HCH1P53834 153 aa0.05□□□□□ -2.4
SDH6YDR379C-A DAD3P69850 94 aa0.05□□□□□ -2.4
SDH6YDR379C-A TRM44Q02648 567 aaKnown RBP0.05□□□□□ -2.4
SDH6YDR379C-A RMT2Q03305 412 aa0.05□□□□□ -2.4
SDH6YDR379C-A GYL1Q04322 720 aa0.05□□□□□ -2.4
SDH6YDR379C-A NAT4Q04751 285 aa0.05□□□□□ -2.4
SDH6YDR379C-A BUR2Q05949 395 aa0.05□□□□□ -2.4
SDH6YDR379C-A YOL019WQ08157 551 aa0.05□□□□□ -2.4
SDH6YDR379C-A PEX27Q08580 376 aa0.05□□□□□ -2.4
SDH6YDR379C-A RDL2Q08742 149 aaKnown RBP0.05□□□□□ -2.4
Retrieved 100 of 5,963 RNA–protein pairs in 246.1 ms