RNA–Protein interactions for RNA: ENST00000641476.1

SRRT-219, Transcript of serrate, RNA effector molecule, humanhuman

Gene SRRT, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-219ENST00000641476 GTF3C6Q969F1 213 aa16.38■□□□□ 0.21
SRRT-219ENST00000641476 NKD2Q969F2 451 aaPredicted RBP16.38■□□□□ 0.21
SRRT-219ENST00000641476 FAM20AQ96MK3 541 aa16.38■□□□□ 0.21
SRRT-219ENST00000641476 CASD1Q96PB1 797 aa16.38■□□□□ 0.21
SRRT-219ENST00000641476 GCOM2Q9BZD3 368 aaPredicted RBP16.38■□□□□ 0.21
SRRT-219ENST00000641476 SMOC2Q9H3U7 446 aa16.38■□□□□ 0.21
SRRT-219ENST00000641476 SORCS3Q9UPU3 1222 aa16.38■□□□□ 0.21
SRRT-219ENST00000641476 NR2E1Q9Y466 385 aa16.38■□□□□ 0.21
SRRT-219ENST00000641476 DDX11L8A8MPP1 907 aa16.37■□□□□ 0.21
SRRT-219ENST00000641476 FSCN2O14926 492 aa16.37■□□□□ 0.21
SRRT-219ENST00000641476 MAFO75444 373 aaPredicted RBP16.37■□□□□ 0.21
SRRT-219ENST00000641476 QARSP47897 775 aaKnown RBP16.37■□□□□ 0.21
SRRT-219ENST00000641476 TMEM184AQ6ZMB5 413 aa16.37■□□□□ 0.21
SRRT-219ENST00000641476 LRRC55Q6ZSA7 311 aa16.37■□□□□ 0.21
SRRT-219ENST00000641476 ZNF598Q86UK7 904 aaKnown RBP16.37■□□□□ 0.21
SRRT-219ENST00000641476 ZNF410Q86VK4 478 aa16.37■□□□□ 0.21
SRRT-219ENST00000641476 NECAB1Q8N987 351 aa16.37■□□□□ 0.21
SRRT-219ENST00000641476 WASF1Q92558 559 aa16.37■□□□□ 0.21
SRRT-219ENST00000641476 TCF25Q9BQ70 676 aa16.37■□□□□ 0.21
SRRT-219ENST00000641476 ENTPD7Q9NQZ7 604 aa16.37■□□□□ 0.21
SRRT-219ENST00000641476 WRAP73Q9P2S5 460 aaPredicted RBP16.37■□□□□ 0.21
SRRT-219ENST00000641476 CACNA1AO00555 2505 aa16.37■□□□□ 0.21
SRRT-219ENST00000641476 A0A087WZ62 844 aa16.36■□□□□ 0.21
SRRT-219ENST00000641476 A0A0U1RQF3 1178 aa16.36■□□□□ 0.21
SRRT-219ENST00000641476 C2CD4DB7Z1M9 353 aa16.36■□□□□ 0.21
SRRT-219ENST00000641476 TBX3O15119 743 aa16.36■□□□□ 0.21
SRRT-219ENST00000641476 FDPSP14324 419 aaKnown RBP16.36■□□□□ 0.21
SRRT-219ENST00000641476 SFPQP23246 707 aaKnown RBP eCLIP16.36■□□□□ 0.21
SRRT-219ENST00000641476 KRT2P35908 639 aa16.36■□□□□ 0.21
SRRT-219ENST00000641476 PBX3P40426 434 aa16.36■□□□□ 0.21
SRRT-219ENST00000641476 DNM2P50570 870 aa16.36■□□□□ 0.21
SRRT-219ENST00000641476 NR5A1Q13285 461 aa16.36■□□□□ 0.21
SRRT-219ENST00000641476 KCNC3Q14003 757 aa16.36■□□□□ 0.21
SRRT-219ENST00000641476 ME3Q16798 604 aa16.36■□□□□ 0.21
SRRT-219ENST00000641476 PDE12Q6L8Q7 609 aaKnown RBP16.36■□□□□ 0.21
SRRT-219ENST00000641476 RHPN2Q8IUC4 686 aa16.36■□□□□ 0.21
SRRT-219ENST00000641476 ADSSL1Q8N142 457 aa16.36■□□□□ 0.21
SRRT-219ENST00000641476 NSUN7Q8NE18 718 aaKnown RBP16.36■□□□□ 0.21
SRRT-219ENST00000641476 HAS1Q92839 578 aa16.36■□□□□ 0.21
SRRT-219ENST00000641476 TNFRSF25Q93038 417 aa16.36■□□□□ 0.21
SRRT-219ENST00000641476 NLRP4Q96MN2 994 aa16.36■□□□□ 0.21
SRRT-219ENST00000641476 NAP1L4Q99733 375 aaKnown RBP16.36■□□□□ 0.21
SRRT-219ENST00000641476 JPH2Q9BR39 696 aaPredicted RBP16.36■□□□□ 0.21
SRRT-219ENST00000641476 FDXACB1Q9BRP7 624 aaPredicted RBP16.36■□□□□ 0.21
SRRT-219ENST00000641476 LXNQ9BS40 222 aa16.36■□□□□ 0.21
SRRT-219ENST00000641476 MFSD1Q9H3U5 465 aa16.36■□□□□ 0.21
SRRT-219ENST00000641476 CYP26B1Q9NR63 512 aa16.36■□□□□ 0.21
SRRT-219ENST00000641476 DACT1Q9NYF0 836 aa16.36■□□□□ 0.21
SRRT-219ENST00000641476 SUCLA2Q9P2R7 463 aaPredicted RBP16.36■□□□□ 0.21
SRRT-219ENST00000641476 HIDE1A8MVS5 230 aa16.35■□□□□ 0.21
SRRT-219ENST00000641476 DKC1O60832 514 aaKnown RBP eCLIP16.35■□□□□ 0.21
SRRT-219ENST00000641476 P4HBP07237 508 aaKnown RBP16.35■□□□□ 0.21
SRRT-219ENST00000641476 PPM1AP35813 382 aa16.35■□□□□ 0.21
SRRT-219ENST00000641476 NPEPPSP55786 919 aa16.35■□□□□ 0.21
SRRT-219ENST00000641476 CDC42EP1Q00587 391 aa16.35■□□□□ 0.21
SRRT-219ENST00000641476 PLCB3Q01970 1234 aa16.35■□□□□ 0.21
SRRT-219ENST00000641476 SPIRE1Q08AE8 756 aa16.35■□□□□ 0.21
SRRT-219ENST00000641476 ASTLQ6HA08 431 aaPredicted RBP16.35■□□□□ 0.21
SRRT-219ENST00000641476 NCAPH2Q6IBW4 605 aa16.35■□□□□ 0.21
SRRT-219ENST00000641476 KCNT2Q6UVM3 1135 aa16.35■□□□□ 0.21
SRRT-219ENST00000641476 KSR1Q8IVT5 923 aa16.35■□□□□ 0.21
SRRT-219ENST00000641476 HELQQ8TDG4 1101 aa16.35■□□□□ 0.21
SRRT-219ENST00000641476 MRPS27Q92552 414 aaKnown RBP16.35■□□□□ 0.21
SRRT-219ENST00000641476 ZNF558Q96NG5 402 aa16.35■□□□□ 0.21
SRRT-219ENST00000641476 BRMS1Q9HCU9 246 aa16.35■□□□□ 0.21
SRRT-219ENST00000641476 PIN4Q9Y237 131 aaKnown RBP16.35■□□□□ 0.21
SRRT-219ENST00000641476 LZTS1Q9Y250 596 aa16.35■□□□□ 0.21
SRRT-219ENST00000641476 DCHS1Q96JQ0 3298 aa16.35■□□□□ 0.21
SRRT-219ENST00000641476 ASGR2P07307 311 aa16.34■□□□□ 0.21
SRRT-219ENST00000641476 HOXB8P17481 243 aaPredicted RBP16.34■□□□□ 0.21
SRRT-219ENST00000641476 PHKA2P46019 1235 aa16.34■□□□□ 0.21
SRRT-219ENST00000641476 FOSBP53539 338 aa16.34■□□□□ 0.21
SRRT-219ENST00000641476 POLGP54098 1239 aaPredicted RBP16.34■□□□□ 0.21
SRRT-219ENST00000641476 TWF2Q6IBS0 349 aaKnown RBP16.34■□□□□ 0.21
SRRT-219ENST00000641476 ZNF579Q8NAF0 562 aaKnown RBP16.34■□□□□ 0.21
SRRT-219ENST00000641476 SLC7A3Q8WY07 619 aa16.34■□□□□ 0.21
SRRT-219ENST00000641476 CEP170P1Q96L14 293 aa16.34■□□□□ 0.21
SRRT-219ENST00000641476 MRPL9Q9BYD2 267 aaKnown RBP16.34■□□□□ 0.21
SRRT-219ENST00000641476 POMKQ9H5K3 350 aa16.34■□□□□ 0.21
SRRT-219ENST00000641476 DHX33Q9H6R0 707 aaKnown RBP16.34■□□□□ 0.21
SRRT-219ENST00000641476 BMP2KQ9NSY1 1161 aaPredicted RBP16.34■□□□□ 0.21
SRRT-219ENST00000641476 PPME1Q9Y570 386 aa16.34■□□□□ 0.21
SRRT-219ENST00000641476 COL4A3BPQ9Y5P4 624 aa16.34■□□□□ 0.21
SRRT-219ENST00000641476 VPS13AQ96RL7 3174 aa16.34■□□□□ 0.21
SRRT-219ENST00000641476 MARCH6O60337 910 aa16.33■□□□□ 0.2
SRRT-219ENST00000641476 JAK2O60674 1132 aa16.33■□□□□ 0.2
SRRT-219ENST00000641476 EOMESO95936 686 aa16.33■□□□□ 0.2
SRRT-219ENST00000641476 CYP4A11Q02928 519 aa16.33■□□□□ 0.2
SRRT-219ENST00000641476 ST3GAL1Q11201 340 aa16.33■□□□□ 0.2
SRRT-219ENST00000641476 EPHA7Q15375 998 aa16.33■□□□□ 0.2
SRRT-219ENST00000641476 CES5AQ6NT32 575 aa16.33■□□□□ 0.2
SRRT-219ENST00000641476 CATSPER4Q7RTX7 472 aa16.33■□□□□ 0.2
SRRT-219ENST00000641476 C4orf19Q8IY42 314 aa16.33■□□□□ 0.2
SRRT-219ENST00000641476 DYDC2Q96IM9 177 aa16.33■□□□□ 0.2
SRRT-219ENST00000641476 TRAIPQ9BWF2 469 aa16.33■□□□□ 0.2
SRRT-219ENST00000641476 INO80BQ9C086 356 aaPredicted RBP16.33■□□□□ 0.2
SRRT-219ENST00000641476 IFT122Q9HBG6 1241 aa16.33■□□□□ 0.2
SRRT-219ENST00000641476 CHST12Q9NRB3 414 aa16.33■□□□□ 0.2
SRRT-219ENST00000641476 RGL1Q9NZL6 768 aa16.33■□□□□ 0.2
SRRT-219ENST00000641476 PUF60Q9UHX1 559 aaKnown RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms