RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 NRDE2Q9H7Z3 1164 aa12.53□□□□□ -0.4
PTP4A1-207ENST00000639568 JADE2Q9NQC1 790 aa12.53□□□□□ -0.4
PTP4A1-207ENST00000639568 AKT3Q9Y243 479 aa12.53□□□□□ -0.4
PTP4A1-207ENST00000639568 INPP5FQ9Y2H2 1132 aa12.53□□□□□ -0.4
PTP4A1-207ENST00000639568 UBIAD1Q9Y5Z9 338 aa12.53□□□□□ -0.4
PTP4A1-207ENST00000639568 COL1A2P08123 1366 aa12.53□□□□□ -0.4
PTP4A1-207ENST00000639568 MEIS2O14770 477 aa12.52□□□□□ -0.41
PTP4A1-207ENST00000639568 SPATA31D3P0C874 917 aa12.52□□□□□ -0.41
PTP4A1-207ENST00000639568 FSHRP23945 695 aa12.52□□□□□ -0.41
PTP4A1-207ENST00000639568 SLC11A1P49279 550 aa12.52□□□□□ -0.41
PTP4A1-207ENST00000639568 LIMK1P53667 647 aa12.52□□□□□ -0.41
PTP4A1-207ENST00000639568 ADCY1Q08828 1119 aa12.52□□□□□ -0.41
PTP4A1-207ENST00000639568 NOMO2Q5JPE7 1267 aa12.52□□□□□ -0.41
PTP4A1-207ENST00000639568 SPATA31D4Q6ZUB0 917 aa12.52□□□□□ -0.41
PTP4A1-207ENST00000639568 TPRG1Q6ZUI0 275 aa12.52□□□□□ -0.41
PTP4A1-207ENST00000639568 ZNF589Q86UQ0 364 aaPredicted RBP12.52□□□□□ -0.41
PTP4A1-207ENST00000639568 ZNF710Q8N1W2 664 aa12.52□□□□□ -0.41
PTP4A1-207ENST00000639568 HDAC7Q8WUI4 952 aa12.52□□□□□ -0.41
PTP4A1-207ENST00000639568 ZNF707Q96C28 371 aaPredicted RBP12.52□□□□□ -0.41
PTP4A1-207ENST00000639568 MAP7D2Q96T17 732 aa12.52□□□□□ -0.41
PTP4A1-207ENST00000639568 VN1R3Q9BXE9 311 aa12.52□□□□□ -0.41
PTP4A1-207ENST00000639568 NT5C3AQ9H0P0 336 aa12.52□□□□□ -0.41
PTP4A1-207ENST00000639568 PLEKHA4Q9H4M7 779 aa12.52□□□□□ -0.41
PTP4A1-207ENST00000639568 KCNH7Q9NS40 1196 aa12.52□□□□□ -0.41
PTP4A1-207ENST00000639568 TBC1D13Q9NVG8 400 aa12.52□□□□□ -0.41
PTP4A1-207ENST00000639568 NBEAQ8NFP9 2946 aa12.51□□□□□ -0.41
PTP4A1-207ENST00000639568 DSPP15924 2871 aaKnown RBP12.51□□□□□ -0.41
PTP4A1-207ENST00000639568 SPDYE3A6NKU9 549 aa12.51□□□□□ -0.41
PTP4A1-207ENST00000639568 SRRM3A6NNA2 597 aaPredicted RBP12.51□□□□□ -0.41
PTP4A1-207ENST00000639568 TEX28O15482 410 aa12.51□□□□□ -0.41
PTP4A1-207ENST00000639568 LILRB3O75022 631 aa12.51□□□□□ -0.41
PTP4A1-207ENST00000639568 ALDH2P05091 517 aa12.51□□□□□ -0.41
PTP4A1-207ENST00000639568 SKIP12755 728 aa12.51□□□□□ -0.41
PTP4A1-207ENST00000639568 TARSP26639 723 aaKnown RBP12.51□□□□□ -0.41
PTP4A1-207ENST00000639568 TMOD1P28289 359 aa12.51□□□□□ -0.41
PTP4A1-207ENST00000639568 LONRF3Q496Y0 759 aa12.51□□□□□ -0.41
PTP4A1-207ENST00000639568 PDXDC2PQ6P474 469 aa12.51□□□□□ -0.41
PTP4A1-207ENST00000639568 OTUD7AQ8TE49 926 aaPredicted RBP12.51□□□□□ -0.41
PTP4A1-207ENST00000639568 KIF12Q96FN5 646 aa12.51□□□□□ -0.41
PTP4A1-207ENST00000639568 RPS6KC1Q96S38 1066 aa12.51□□□□□ -0.41
PTP4A1-207ENST00000639568 CNNM2Q9H8M5 875 aa12.51□□□□□ -0.41
PTP4A1-207ENST00000639568 ZDHHC7Q9NXF8 308 aa12.51□□□□□ -0.41
PTP4A1-207ENST00000639568 DNAJB4Q9UDY4 337 aa12.51□□□□□ -0.41
PTP4A1-207ENST00000639568 CDH7Q9ULB5 785 aa12.51□□□□□ -0.41
PTP4A1-207ENST00000639568 CYTH3O43739 400 aa12.5□□□□□ -0.41
PTP4A1-207ENST00000639568 GAS2O43903 313 aaKnown RBP12.5□□□□□ -0.41
PTP4A1-207ENST00000639568 KCNK5O95279 499 aa12.5□□□□□ -0.41
PTP4A1-207ENST00000639568 C22orf31O95567 290 aa12.5□□□□□ -0.41
PTP4A1-207ENST00000639568 KIF5BP33176 963 aa12.5□□□□□ -0.41
PTP4A1-207ENST00000639568 GRM4Q14833 912 aa12.5□□□□□ -0.41
PTP4A1-207ENST00000639568 SLC35G1Q2M3R5 365 aa12.5□□□□□ -0.41
PTP4A1-207ENST00000639568 TRMT1LQ7Z2T5 733 aaKnown RBP12.5□□□□□ -0.41
PTP4A1-207ENST00000639568 PALB2Q86YC2 1186 aa12.5□□□□□ -0.41
PTP4A1-207ENST00000639568 URGCPQ8TCY9 931 aa12.5□□□□□ -0.41
PTP4A1-207ENST00000639568 RRP36Q96EU6 259 aaKnown RBP12.5□□□□□ -0.41
PTP4A1-207ENST00000639568 FAM193BQ96PV7 902 aaPredicted RBP12.5□□□□□ -0.41
PTP4A1-207ENST00000639568 PRKD2Q9BZL6 878 aa12.5□□□□□ -0.41
PTP4A1-207ENST00000639568 PSTPIP2Q9H939 334 aa12.5□□□□□ -0.41
PTP4A1-207ENST00000639568 ZNF302Q9NR11 478 aa12.5□□□□□ -0.41
PTP4A1-207ENST00000639568 SEC63Q9UGP8 760 aaKnown RBP12.5□□□□□ -0.41
PTP4A1-207ENST00000639568 FAN1Q9Y2M0 1017 aa12.5□□□□□ -0.41
PTP4A1-207ENST00000639568 NFASCO94856 1347 aa12.5□□□□□ -0.41
PTP4A1-207ENST00000639568 ASH1LQ9NR48 2969 aaKnown RBP12.49□□□□□ -0.41
PTP4A1-207ENST00000639568 IGF2RP11717 2491 aa12.49□□□□□ -0.41
PTP4A1-207ENST00000639568 CNOT1A5YKK6 2376 aaKnown RBP12.49□□□□□ -0.41
PTP4A1-207ENST00000639568 LOXHD1Q8IVV2 1947 aa12.49□□□□□ -0.41
PTP4A1-207ENST00000639568 DOCK5Q9H7D0 1870 aa12.49□□□□□ -0.41
PTP4A1-207ENST00000639568 TM4SF5O14894 197 aa12.49□□□□□ -0.41
PTP4A1-207ENST00000639568 MAGEB2O15479 319 aa12.49□□□□□ -0.41
PTP4A1-207ENST00000639568 ATG7O95352 703 aa12.49□□□□□ -0.41
PTP4A1-207ENST00000639568 SOD2P04179 222 aa12.49□□□□□ -0.41
PTP4A1-207ENST00000639568 CNR2P34972 360 aa12.49□□□□□ -0.41
PTP4A1-207ENST00000639568 PHKA2P46019 1235 aa12.49□□□□□ -0.41
PTP4A1-207ENST00000639568 CCR3P51677 355 aa12.49□□□□□ -0.41
PTP4A1-207ENST00000639568 CLCN3P51790 818 aa12.49□□□□□ -0.41
PTP4A1-207ENST00000639568 NMIQ13287 307 aaPredicted RBP12.49□□□□□ -0.41
PTP4A1-207ENST00000639568 IMMTQ16891 758 aaKnown RBP12.49□□□□□ -0.41
PTP4A1-207ENST00000639568 TWF2Q6IBS0 349 aaKnown RBP12.49□□□□□ -0.41
PTP4A1-207ENST00000639568 PSAPL1Q6NUJ1 521 aa12.49□□□□□ -0.41
PTP4A1-207ENST00000639568 ZNF280BQ86YH2 543 aa12.49□□□□□ -0.41
PTP4A1-207ENST00000639568 LPPQ93052 612 aa12.49□□□□□ -0.41
PTP4A1-207ENST00000639568 PHF20Q9BVI0 1012 aa12.49□□□□□ -0.41
PTP4A1-207ENST00000639568 ADAMTS10Q9H324 1103 aa12.49□□□□□ -0.41
PTP4A1-207ENST00000639568 CHST12Q9NRB3 414 aa12.49□□□□□ -0.41
PTP4A1-207ENST00000639568 ZBTB47Q9UFB7 747 aaPredicted RBP12.49□□□□□ -0.41
PTP4A1-207ENST00000639568 ZBTB42B2RXF5 422 aa12.48□□□□□ -0.41
PTP4A1-207ENST00000639568 ZIC2O95409 532 aaPredicted RBP12.48□□□□□ -0.41
PTP4A1-207ENST00000639568 TDGF1P13385 188 aa12.48□□□□□ -0.41
PTP4A1-207ENST00000639568 DARSP14868 501 aaKnown RBP12.48□□□□□ -0.41
PTP4A1-207ENST00000639568 FGFR4P22455 802 aa12.48□□□□□ -0.41
PTP4A1-207ENST00000639568 GLUD2P49448 558 aa12.48□□□□□ -0.41
PTP4A1-207ENST00000639568 FOXC1Q12948 553 aa12.48□□□□□ -0.41
PTP4A1-207ENST00000639568 STPG1Q5TH74 334 aa12.48□□□□□ -0.41
PTP4A1-207ENST00000639568 SWSAP1Q6NVH7 229 aa12.48□□□□□ -0.41
PTP4A1-207ENST00000639568 EFCAB12Q6NXP0 572 aa12.48□□□□□ -0.41
PTP4A1-207ENST00000639568 MIS18BP1Q6P0N0 1132 aa12.48□□□□□ -0.41
PTP4A1-207ENST00000639568 MAMSTRQ6ZN01 415 aa12.48□□□□□ -0.41
PTP4A1-207ENST00000639568 CEP68Q76N32 757 aa12.48□□□□□ -0.41
PTP4A1-207ENST00000639568 GRASPQ7Z6J2 395 aaPredicted RBP12.48□□□□□ -0.41
PTP4A1-207ENST00000639568 TICAM2Q86XR7 235 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms