RNA–Protein interactions for RNA: ENST00000639487.1

RTTN-215, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,175 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-215ENST00000639487 ARHGEF16Q5VV41 709 aa7.21□□□□□ -1.25
RTTN-215ENST00000639487 KLHDC10Q6PID8 442 aa7.21□□□□□ -1.25
RTTN-215ENST00000639487 PADI6Q6TGC4 694 aa7.21□□□□□ -1.25
RTTN-215ENST00000639487 NOL8Q76FK4 1167 aaKnown RBP7.21□□□□□ -1.25
RTTN-215ENST00000639487 DDX53Q86TM3 631 aaKnown RBP7.21□□□□□ -1.25
RTTN-215ENST00000639487 RSPH3Q86UC2 560 aa7.21□□□□□ -1.25
RTTN-215ENST00000639487 KRI1Q8N9T8 703 aaKnown RBP7.21□□□□□ -1.25
RTTN-215ENST00000639487 RETREG2Q8NC44 543 aa7.21□□□□□ -1.25
RTTN-215ENST00000639487 FAM71BQ8TC56 605 aa7.21□□□□□ -1.25
RTTN-215ENST00000639487 TTLL2Q9BWV7 592 aa7.21□□□□□ -1.25
RTTN-215ENST00000639487 WNT8AQ9H1J5 351 aa7.21□□□□□ -1.25
RTTN-215ENST00000639487 XPNPEP3Q9NQH7 507 aa7.21□□□□□ -1.25
RTTN-215ENST00000639487 ZNF302Q9NR11 478 aa7.21□□□□□ -1.25
RTTN-215ENST00000639487 KIF28PB7ZC32 967 aa7.21□□□□□ -1.26
RTTN-215ENST00000639487 MORC3Q14149 939 aa7.21□□□□□ -1.26
RTTN-215ENST00000639487 E2F5Q15329 346 aa7.21□□□□□ -1.26
RTTN-215ENST00000639487 SAFBQ15424 915 aaKnown RBP eCLIP7.21□□□□□ -1.26
RTTN-215ENST00000639487 TMCO4Q5TGY1 634 aa7.21□□□□□ -1.26
RTTN-215ENST00000639487 PLPP4Q5VZY2 271 aa7.21□□□□□ -1.26
RTTN-215ENST00000639487 BCO2Q9BYV7 579 aa7.21□□□□□ -1.26
RTTN-215ENST00000639487 ATP6V0A4Q9HBG4 840 aa7.21□□□□□ -1.26
RTTN-215ENST00000639487 XPNPEP1Q9NQW7 623 aa7.21□□□□□ -1.26
RTTN-215ENST00000639487 CHST7Q9NS84 486 aa7.21□□□□□ -1.26
RTTN-215ENST00000639487 DDX19AQ9NUU7 478 aaKnown RBP7.21□□□□□ -1.26
RTTN-215ENST00000639487 CHMP5Q9NZZ3 219 aa7.21□□□□□ -1.26
RTTN-215ENST00000639487 ORC3Q9UBD5 711 aaPredicted RBP7.21□□□□□ -1.26
RTTN-215ENST00000639487 A0A0U1RQF3 1178 aa7.2□□□□□ -1.26
RTTN-215ENST00000639487 EIF3CLB5ME19 914 aaKnown RBP7.2□□□□□ -1.26
RTTN-215ENST00000639487 DGKIO75912 1065 aa7.2□□□□□ -1.26
RTTN-215ENST00000639487 SYT1P21579 422 aa7.2□□□□□ -1.26
RTTN-215ENST00000639487 ZNF132P52740 706 aa7.2□□□□□ -1.26
RTTN-215ENST00000639487 CACNB3P54284 484 aa7.2□□□□□ -1.26
RTTN-215ENST00000639487 TCP10Q12799 353 aa7.2□□□□□ -1.26
RTTN-215ENST00000639487 SHROOM1Q2M3G4 852 aaPredicted RBP7.2□□□□□ -1.26
RTTN-215ENST00000639487 ENOSF1Q7L5Y1 443 aa7.2□□□□□ -1.26
RTTN-215ENST00000639487 TMEM199Q8N511 208 aa7.2□□□□□ -1.26
RTTN-215ENST00000639487 ANKRD13CQ8N6S4 541 aa7.2□□□□□ -1.26
RTTN-215ENST00000639487 SUSD6Q92537 303 aa7.2□□□□□ -1.26
RTTN-215ENST00000639487 TOP1MTQ969P6 601 aa7.2□□□□□ -1.26
RTTN-215ENST00000639487 C8orf76Q96K31 380 aa7.2□□□□□ -1.26
RTTN-215ENST00000639487 EIF3CQ99613 913 aaKnown RBP7.2□□□□□ -1.26
RTTN-215ENST00000639487 PANK2Q9BZ23 570 aa7.2□□□□□ -1.26
RTTN-215ENST00000639487 AP5M1Q9H0R1 490 aa7.2□□□□□ -1.26
RTTN-215ENST00000639487 RAVER2Q9HCJ3 691 aaKnown RBP7.2□□□□□ -1.26
RTTN-215ENST00000639487 NOL4O94818 638 aa7.2□□□□□ -1.26
RTTN-215ENST00000639487 CCND3P30281 292 aaPredicted RBP7.2□□□□□ -1.26
RTTN-215ENST00000639487 PPM1AP35813 382 aa7.2□□□□□ -1.26
RTTN-215ENST00000639487 PNPLA4P41247 253 aa7.2□□□□□ -1.26
RTTN-215ENST00000639487 ZNF135P52742 658 aaPredicted RBP7.2□□□□□ -1.26
RTTN-215ENST00000639487 NAPAP54920 295 aa7.2□□□□□ -1.26
RTTN-215ENST00000639487 ZNF445P59923 1031 aa7.2□□□□□ -1.26
RTTN-215ENST00000639487 AMPD3Q01432 767 aa7.2□□□□□ -1.26
RTTN-215ENST00000639487 PSMD6Q15008 389 aa7.2□□□□□ -1.26
RTTN-215ENST00000639487 POSTNQ15063 836 aa7.2□□□□□ -1.26
RTTN-215ENST00000639487 DIS3L2Q8IYB7 885 aaKnown RBP7.2□□□□□ -1.26
RTTN-215ENST00000639487 TBCKQ8TEA7 893 aa7.2□□□□□ -1.26
RTTN-215ENST00000639487 E2F7Q96AV8 911 aa7.2□□□□□ -1.26
RTTN-215ENST00000639487 TMEM117Q9H0C3 514 aa7.2□□□□□ -1.26
RTTN-215ENST00000639487 CWH43Q9H720 699 aa7.2□□□□□ -1.26
RTTN-215ENST00000639487 PLCB1Q9NQ66 1216 aa7.2□□□□□ -1.26
RTTN-215ENST00000639487 DSEQ9UL01 958 aa7.2□□□□□ -1.26
RTTN-215ENST00000639487 MINDY4BA8MYZ0 360 aa7.2□□□□□ -1.26
RTTN-215ENST00000639487 LCA5LO95447 670 aa7.2□□□□□ -1.26
RTTN-215ENST00000639487 MBD3O95983 291 aa7.2□□□□□ -1.26
RTTN-215ENST00000639487 FGFR3P22607 806 aa7.2□□□□□ -1.26
RTTN-215ENST00000639487 PSMA3P25788 255 aa7.2□□□□□ -1.26
RTTN-215ENST00000639487 CLCN1P35523 988 aa7.2□□□□□ -1.26
RTTN-215ENST00000639487 SLC20A2Q08357 652 aa7.2□□□□□ -1.26
RTTN-215ENST00000639487 GRIK3Q13003 919 aa7.2□□□□□ -1.26
RTTN-215ENST00000639487 KIAA0319LQ8IZA0 1049 aa7.2□□□□□ -1.26
RTTN-215ENST00000639487 DAW1Q8N136 415 aa7.2□□□□□ -1.26
RTTN-215ENST00000639487 CACTIN-AS1Q8N1I8 211 aa7.2□□□□□ -1.26
RTTN-215ENST00000639487 OR6J1Q8NGC5 347 aa7.2□□□□□ -1.26
RTTN-215ENST00000639487 IL31RAQ8NI17 732 aa7.2□□□□□ -1.26
RTTN-215ENST00000639487 DTX3LQ8TDB6 740 aa7.2□□□□□ -1.26
RTTN-215ENST00000639487 STK32AQ8WU08 396 aa7.2□□□□□ -1.26
RTTN-215ENST00000639487 SNX27Q96L92 541 aa7.2□□□□□ -1.26
RTTN-215ENST00000639487 EIF2AK1Q9BQI3 630 aaKnown RBP7.2□□□□□ -1.26
RTTN-215ENST00000639487 CELF4Q9BZC1 486 aaKnown RBP7.2□□□□□ -1.26
RTTN-215ENST00000639487 UNC93B1Q9H1C4 597 aa7.2□□□□□ -1.26
RTTN-215ENST00000639487 CLEC11AQ9Y240 323 aa7.2□□□□□ -1.26
RTTN-215ENST00000639487 SMIM22K7EJ46 135 aa7.19□□□□□ -1.26
RTTN-215ENST00000639487 OLFM2O95897 454 aa7.19□□□□□ -1.26
RTTN-215ENST00000639487 RPN1P04843 607 aaKnown RBP7.19□□□□□ -1.26
RTTN-215ENST00000639487 HNRNPA1P09651 372 aaKnown RBP eCLIP7.19□□□□□ -1.26
RTTN-215ENST00000639487 ACTN1P12814 892 aa7.19□□□□□ -1.26
RTTN-215ENST00000639487 WARSP23381 471 aaKnown RBP7.19□□□□□ -1.26
RTTN-215ENST00000639487 UBE2HP62256 183 aa7.19□□□□□ -1.26
RTTN-215ENST00000639487 ELAVL2Q12926 359 aaKnown RBP7.19□□□□□ -1.26
RTTN-215ENST00000639487 ITGA7Q13683 1181 aa7.19□□□□□ -1.26
RTTN-215ENST00000639487 CD300LGQ6UXG3 332 aa7.19□□□□□ -1.26
RTTN-215ENST00000639487 MOB2Q70IA6 237 aa7.19□□□□□ -1.26
RTTN-215ENST00000639487 ANO5Q75V66 913 aa7.19□□□□□ -1.26
RTTN-215ENST00000639487 MIGA2Q7L4E1 593 aa7.19□□□□□ -1.26
RTTN-215ENST00000639487 FRMD5Q7Z6J6 570 aa7.19□□□□□ -1.26
RTTN-215ENST00000639487 KDM1BQ8NB78 822 aa7.19□□□□□ -1.26
RTTN-215ENST00000639487 MYRFLQ96LU7 910 aa7.19□□□□□ -1.26
RTTN-215ENST00000639487 MAP7D2Q96T17 732 aa7.19□□□□□ -1.26
RTTN-215ENST00000639487 BEGAINQ9BUH8 593 aa7.19□□□□□ -1.26
RTTN-215ENST00000639487 THAP9Q9H5L6 903 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms