RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 CNNM4Q6P4Q7 775 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 ZYG11AQ6WRX3 759 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 ZNF600Q6ZNG1 722 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 RBM43Q6ZSC3 357 aaKnown RBP4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 SCYL3Q8IZE3 742 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 VPS39Q96JC1 886 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 KRT23Q9C075 422 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 CARD9Q9H257 536 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 VPS16Q9H269 839 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 GPR108Q9NPR9 543 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 PNMA3Q9UL41 463 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 RIMKLBQ9ULI2 386 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 KDM4FA0A1W2PPD8 638 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 CTAGE15A4D2H0 777 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 GOLGA8BA8MQT2 603 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 ZC3H11AO75152 810 aaKnown RBP eCLIP4.16□□□□□ -1.742e-6■■■■■ 37.4
R3HDM1-220ENST00000628915 NR1I2O75469 434 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 GLRX3O76003 335 aaKnown RBP4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 CTAGE8P0CG41 777 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 SDSP20132 328 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 CTNNA2P26232 953 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 TARSP26639 723 aaKnown RBP4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 IFNA8P32881 189 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 CTHP32929 405 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 IFNAR2P48551 515 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 AP3M2P53677 418 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 MYL6P60660 151 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 SCRN3Q0VDG4 424 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 PTK2BQ14289 1009 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 PPP2R5DQ14738 602 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 PKN2Q16513 984 aaKnown RBP4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 ZNF792Q3KQV3 632 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 FSCBQ5H9T9 825 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 NCAPH2Q6IBW4 605 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 PPIP5K1Q6PFW1 1433 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 ISLR2Q6UXK2 745 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 CTAGE6Q86UF2 777 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 SPATA2LQ8IUW3 424 aaPredicted RBP4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 ZSCAN29Q8IWY8 852 aaPredicted RBP4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 CTAGE4Q8IX94 777 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 REXO1Q8N1G1 1221 aaKnown RBP4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 SCAIQ8N9R8 606 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 OR8K1Q8NGG5 319 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 MAGEC3Q8TD91 643 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 FGD4Q96M96 766 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 MNTQ99583 582 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 GPATCH1Q9BRR8 931 aaKnown RBP4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 FHDC1Q9C0D6 1143 aaPredicted RBP4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 CCSER1Q9C0I3 900 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 C8orf33Q9H7E9 229 aaPredicted RBP4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 VIPAS39Q9H9C1 493 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 MCM9Q9NXL9 1143 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 GNEQ9Y223 722 aaKnown RBP4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 SPEF1Q9Y4P9 236 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 TTC21BQ7Z4L5 1316 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 XIRP2A4UGR9 3374 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 KIF1AQ12756 1690 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 ABCC6O95255 1503 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 ZFYVE9O95405 1425 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 K7ENM7 598 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 NCAM2O15394 837 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 FSBPO95073 299 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 LMNAP02545 664 aaKnown RBP4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 GZMAP12544 262 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 ATF6P18850 670 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 SYT1P21579 422 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 PHBP35232 272 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 KRT9P35527 623 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 ETFBP38117 255 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 IGHMBP2P38935 993 aaKnown RBP4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 MSLNQ13421 630 aaPredicted RBP4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 NDUFA5Q16718 116 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 E4F1Q66K89 784 aaPredicted RBP4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 RAB12Q6IQ22 244 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 FOXR1Q6PIV2 292 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 B3GNT6Q6ZMB0 384 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 C4orf50Q6ZRC1 276 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 BRAPQ7Z569 592 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 AKAP14Q86UN6 197 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 MCF2L2Q86YR7 1114 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 TTC5Q8N0Z6 440 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 ANKRD13CQ8N6S4 541 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 FATE1Q969F0 183 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 OMA1Q96E52 524 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 TCF12Q99081 682 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 MXD3Q9BW11 206 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 TDRD1Q9BXT4 1180 aaKnown RBP4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 FAM204AQ9H8W3 233 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 PREBQ9HCU5 417 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 CLEC4AQ9UMR7 237 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 SOX13Q9UN79 622 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 JAG2Q9Y219 1238 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 ARHGEF37A1IGU5 675 aa4.15□□□□□ -1.74
R3HDM1-220ENST00000628915 SOWAHDA6NJG2 315 aa4.15□□□□□ -1.74
R3HDM1-220ENST00000628915 IKBKBO14920 756 aa4.15□□□□□ -1.74
R3HDM1-220ENST00000628915 ZBTB7BO15156 539 aaPredicted RBP4.15□□□□□ -1.74
R3HDM1-220ENST00000628915 HNRNPRO43390 633 aaKnown RBP4.15□□□□□ -1.74
R3HDM1-220ENST00000628915 HSPA4LO95757 839 aa4.15□□□□□ -1.74
R3HDM1-220ENST00000628915 CYP17A1P05093 508 aa4.15□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms