RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 FAM105AQ9NUU6 356 aa21.28■■□□□ 1
SMN2-215ENST00000628696 MEIS3P2A8K0S8 358 aa21.27■■□□□ 1
SMN2-215ENST00000628696 M0R2N6 131 aa21.27■■□□□ 1
SMN2-215ENST00000628696 LETM2Q2VYF4 491 aa21.27■■□□□ 1
SMN2-215ENST00000628696 ANO5Q75V66 913 aa21.27■■□□□ 1
SMN2-215ENST00000628696 DAGLBQ8NCG7 672 aa21.27■■□□□ 1
SMN2-215ENST00000628696 KREMEN2Q8NCW0 462 aa21.27■■□□□ 1
SMN2-215ENST00000628696 ZNF274Q96GC6 653 aaPredicted RBP21.27■■□□□ 1
SMN2-215ENST00000628696 MBOAT7Q96N66 472 aa21.27■■□□□ 1
SMN2-215ENST00000628696 JPH2Q9BR39 696 aaPredicted RBP21.27■■□□□ 1
SMN2-215ENST00000628696 ZBP1Q9H171 429 aa21.27■■□□□ 1
SMN2-215ENST00000628696 NRDE2Q9H7Z3 1164 aa21.27■■□□□ 1
SMN2-215ENST00000628696 TBC1D13Q9NVG8 400 aa21.27■■□□□ 1
SMN2-215ENST00000628696 KCNJ14Q9UNX9 436 aa21.27■■□□□ 1
SMN2-215ENST00000628696 C2CD4DB7Z1M9 353 aa21.26■□□□□ 0.99
SMN2-215ENST00000628696 EML1O00423 815 aa21.26■□□□□ 0.99
SMN2-215ENST00000628696 SLC37A4O43826 429 aa21.26■□□□□ 0.99
SMN2-215ENST00000628696 AVPR2P30518 371 aa21.26■□□□□ 0.99
SMN2-215ENST00000628696 MTHFRP42898 656 aa21.26■□□□□ 0.99
SMN2-215ENST00000628696 NPEPPSP55786 919 aa21.26■□□□□ 0.99
SMN2-215ENST00000628696 TCF15Q12870 199 aa21.26■□□□□ 0.99
SMN2-215ENST00000628696 GALNT17Q6IS24 598 aa21.26■□□□□ 0.99
SMN2-215ENST00000628696 KANK3Q6NY19 840 aa21.26■□□□□ 0.99
SMN2-215ENST00000628696 MOXD1Q6UVY6 613 aa21.26■□□□□ 0.99
SMN2-215ENST00000628696 KRT25Q7Z3Z0 450 aa21.26■□□□□ 0.99
SMN2-215ENST00000628696 DDX53Q86TM3 631 aaKnown RBP21.26■□□□□ 0.99
SMN2-215ENST00000628696 IGSF21Q96ID5 467 aa21.26■□□□□ 0.99
SMN2-215ENST00000628696 RIPOR3Q96MK2 946 aa21.26■□□□□ 0.99
SMN2-215ENST00000628696 TRAIPQ9BWF2 469 aa21.26■□□□□ 0.99
SMN2-215ENST00000628696 OFD1O75665 1012 aa21.25■□□□□ 0.99
SMN2-215ENST00000628696 PDGFBP01127 241 aaPredicted RBP21.25■□□□□ 0.99
SMN2-215ENST00000628696 GALTP07902 379 aa21.25■□□□□ 0.99
SMN2-215ENST00000628696 EPCAMP16422 314 aa21.25■□□□□ 0.99
SMN2-215ENST00000628696 QARSP47897 775 aaKnown RBP21.25■□□□□ 0.99
SMN2-215ENST00000628696 RAB27AP51159 221 aa21.25■□□□□ 0.99
SMN2-215ENST00000628696 POLGP54098 1239 aaPredicted RBP21.25■□□□□ 0.99
SMN2-215ENST00000628696 NPY5RQ15761 445 aa21.25■□□□□ 0.99
SMN2-215ENST00000628696 RSPH1Q8WYR4 309 aa21.25■□□□□ 0.99
SMN2-215ENST00000628696 PGBD4Q96DM1 585 aa21.25■□□□□ 0.99
SMN2-215ENST00000628696 CYP26B1Q9NR63 512 aa21.25■□□□□ 0.99
SMN2-215ENST00000628696 PCDHB2Q9Y5E7 798 aa21.25■□□□□ 0.99
SMN2-215ENST00000628696 COL4A3BPQ9Y5P4 624 aa21.25■□□□□ 0.99
SMN2-215ENST00000628696 CCDC194A0A1B0GVG4 234 aa21.24■□□□□ 0.99
SMN2-215ENST00000628696 CARNS1A5YM72 827 aa21.24■□□□□ 0.99
SMN2-215ENST00000628696 ZNF623O75123 536 aa21.24■□□□□ 0.99
SMN2-215ENST00000628696 SRGAP2CP0DJJ0 459 aa21.24■□□□□ 0.99
SMN2-215ENST00000628696 CTSAP10619 480 aa21.24■□□□□ 0.99
SMN2-215ENST00000628696 GIT2Q14161 759 aa21.24■□□□□ 0.99
SMN2-215ENST00000628696 ATAT1Q5SQI0 421 aa21.24■□□□□ 0.99
SMN2-215ENST00000628696 URGCPQ8TCY9 931 aa21.24■□□□□ 0.99
SMN2-215ENST00000628696 BCL7CQ8WUZ0 217 aaPredicted RBP21.24■□□□□ 0.99
SMN2-215ENST00000628696 SLC7A3Q8WY07 619 aa21.24■□□□□ 0.99
SMN2-215ENST00000628696 CEP170P1Q96L14 293 aa21.24■□□□□ 0.99
SMN2-215ENST00000628696 BMP2KQ9NSY1 1161 aaPredicted RBP21.24■□□□□ 0.99
SMN2-215ENST00000628696 FAM86C1Q9NVL1 165 aa21.24■□□□□ 0.99
SMN2-215ENST00000628696 DZANK1Q9NVP4 752 aa21.24■□□□□ 0.99
SMN2-215ENST00000628696 DNAJB4Q9UDY4 337 aa21.24■□□□□ 0.99
SMN2-215ENST00000628696 SORCS3Q9UPU3 1222 aa21.24■□□□□ 0.99
SMN2-215ENST00000628696 SPDYE4A6NLX3 237 aa21.23■□□□□ 0.99
SMN2-215ENST00000628696 MARCH6O60337 910 aa21.23■□□□□ 0.99
SMN2-215ENST00000628696 DKC1O60832 514 aaKnown RBP eCLIP21.23■□□□□ 0.99
SMN2-215ENST00000628696 SLC11A1P49279 550 aa21.23■□□□□ 0.99
SMN2-215ENST00000628696 PPP2R5CQ13362 524 aa21.23■□□□□ 0.99
SMN2-215ENST00000628696 MTMR3Q13615 1198 aa21.23■□□□□ 0.99
SMN2-215ENST00000628696 ZNF280BQ86YH2 543 aa21.23■□□□□ 0.99
SMN2-215ENST00000628696 FAM177A1Q8N128 213 aaPredicted RBP21.23■□□□□ 0.99
SMN2-215ENST00000628696 ZNF579Q8NAF0 562 aaKnown RBP21.23■□□□□ 0.99
SMN2-215ENST00000628696 PRPF31Q8WWY3 499 aaKnown RBP21.23■□□□□ 0.99
SMN2-215ENST00000628696 TMEM143Q96AN5 459 aa21.23■□□□□ 0.99
SMN2-215ENST00000628696 FAM20AQ96MK3 541 aa21.23■□□□□ 0.99
SMN2-215ENST00000628696 IFT122Q9HBG6 1241 aa21.23■□□□□ 0.99
SMN2-215ENST00000628696 PDRG1Q9NUG6 133 aa21.23■□□□□ 0.99
SMN2-215ENST00000628696 DBR1Q9UK59 544 aaKnown RBP21.23■□□□□ 0.99
SMN2-215ENST00000628696 VAV3Q9UKW4 847 aa21.23■□□□□ 0.99
SMN2-215ENST00000628696 BRD1O95696 1058 aa21.22■□□□□ 0.99
SMN2-215ENST00000628696 SSBP05455 408 aaKnown RBP eCLIP21.22■□□□□ 0.99
SMN2-215ENST00000628696 P4HBP07237 508 aaKnown RBP21.22■□□□□ 0.99
SMN2-215ENST00000628696 ASGR2P07307 311 aa21.22■□□□□ 0.99
SMN2-215ENST00000628696 NEK8Q86SG6 692 aa21.22■□□□□ 0.99
SMN2-215ENST00000628696 CABP7Q86V35 215 aa21.22■□□□□ 0.99
SMN2-215ENST00000628696 UBALD2Q8IYN6 164 aa21.22■□□□□ 0.99
SMN2-215ENST00000628696 TDRD5Q8NAT2 981 aaKnown RBP21.22■□□□□ 0.99
SMN2-215ENST00000628696 SLC22A17Q8WUG5 538 aa21.22■□□□□ 0.99
SMN2-215ENST00000628696 ATOH1Q92858 354 aaPredicted RBP21.22■□□□□ 0.99
SMN2-215ENST00000628696 FAM193BQ96PV7 902 aaPredicted RBP21.22■□□□□ 0.99
SMN2-215ENST00000628696 AGPAT5Q9NUQ2 364 aa21.22■□□□□ 0.99
SMN2-215ENST00000628696 LIMD1Q9UGP4 676 aa21.22■□□□□ 0.99
SMN2-215ENST00000628696 IRAK3Q9Y616 596 aa21.22■□□□□ 0.99
SMN2-215ENST00000628696 B4GALT3O60512 393 aa21.21■□□□□ 0.99
SMN2-215ENST00000628696 CCNT1O60563 726 aaKnown RBP21.21■□□□□ 0.99
SMN2-215ENST00000628696 KIAA1841Q6NSI8 718 aa21.21■□□□□ 0.99
SMN2-215ENST00000628696 TMC5Q6UXY8 1006 aa21.21■□□□□ 0.99
SMN2-215ENST00000628696 AGMOQ6ZNB7 445 aa21.21■□□□□ 0.99
SMN2-215ENST00000628696 EXOC8Q8IYI6 725 aa21.21■□□□□ 0.99
SMN2-215ENST00000628696 PSPC1Q8WXF1 523 aaKnown RBP21.21■□□□□ 0.99
SMN2-215ENST00000628696 TM6SF1Q9BZW5 370 aa21.21■□□□□ 0.99
SMN2-215ENST00000628696 SMOC2Q9H3U7 446 aa21.21■□□□□ 0.99
SMN2-215ENST00000628696 KCNMB3Q9NPA1 279 aa21.21■□□□□ 0.99
SMN2-215ENST00000628696 WRAP73Q9P2S5 460 aaPredicted RBP21.21■□□□□ 0.99
SMN2-215ENST00000628696 DTNBO60941 627 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms