RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 FAM170AA1A519 330 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 EIF3DO15371 548 aaKnown RBP eCLIP4.86□□□□□ -1.639e-7■□□□□ 9.6
CHD9-221ENST00000615216 ZRANB2O95218 330 aaKnown RBP eCLIP4.86□□□□□ -1.63
CHD9-221ENST00000615216 GGCXP38435 758 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 OCA2Q04671 838 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 GRAMD1BQ3KR37 738 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 HP1BP3Q5SSJ5 553 aaPredicted RBP4.86□□□□□ -1.63
CHD9-221ENST00000615216 CC2D1AQ6P1N0 951 aaPredicted RBP4.86□□□□□ -1.63
CHD9-221ENST00000615216 PADI6Q6TGC4 694 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 LRIG3Q6UXM1 1119 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 MYLK4Q86YV6 388 aaPredicted RBP4.86□□□□□ -1.63
CHD9-221ENST00000615216 FMR1NBQ8N0W7 255 aaPredicted RBP4.86□□□□□ -1.63
CHD9-221ENST00000615216 NCLNQ969V3 563 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 DYNLL2Q96FJ2 89 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 ATP6V1G3Q96LB4 118 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 MRPL4Q9BYD3 311 aaKnown RBP4.86□□□□□ -1.63
CHD9-221ENST00000615216 LMCD1Q9NZU5 365 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 PPARGC1AQ9UBK2 798 aaKnown RBP4.86□□□□□ -1.63
CHD9-221ENST00000615216 ITIH6Q6UXX5 1313 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 GMNCA6NCL1 334 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 USP17L5A8MUK1 530 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 ORC4O43929 436 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 CHGBP05060 677 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 MAPK6Q16659 721 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 NBPF20Q3BBV1 942 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 C1orf146Q5VVC0 180 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 LRRC31Q6UY01 552 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 ASPSCR1Q9BZE9 553 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 ZNF302Q9NR11 478 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 PARVAQ9NVD7 372 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 PPME1Q9Y570 386 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 CLDN3O15551 220 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 CCDC22O60826 627 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 KRT16P08779 473 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 RPSAP08865 295 aaKnown RBP4.86□□□□□ -1.63
CHD9-221ENST00000615216 HOXA13P31271 388 aaPredicted RBP4.86□□□□□ -1.63
CHD9-221ENST00000615216 EFTUD2Q15029 972 aaKnown RBP eCLIP4.86□□□□□ -1.634e-7■■■■□ 24.8
CHD9-221ENST00000615216 STXBP2Q15833 593 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 RARS2Q5T160 578 aaKnown RBP4.86□□□□□ -1.63
CHD9-221ENST00000615216 RNF219Q5W0B1 726 aaPredicted RBP4.86□□□□□ -1.63
CHD9-221ENST00000615216 NUGGCQ68CJ6 796 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 KCNV1Q6PIU1 500 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 DSTYKQ6XUX3 929 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 ICA1LQ8NDH6 482 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 SNX19Q92543 992 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 PGBD1Q96JS3 809 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 A0A0G2JND7 137 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 APOL1O14791 398 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 PRCPP42785 496 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 GFPT1Q06210 699 aaPredicted RBP4.86□□□□□ -1.63
CHD9-221ENST00000615216 C16orf87Q6PH81 154 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 BANK1Q8NDB2 785 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 ACAP3Q96P50 834 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 TSSK1BQ9BXA7 367 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 BHMT2Q9H2M3 363 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 HOXC10Q9NYD6 342 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 ANKRD26Q9UPS8 1709 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 PIK3C2BO00750 1634 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 PNPLA7Q6ZV29 1317 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 USP42Q9H9J4 1324 aaKnown RBP4.86□□□□□ -1.63
CHD9-221ENST00000615216 PSMD3O43242 534 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 PEX3P56589 373 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 MAP3K10Q02779 954 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 KCNH2Q12809 1159 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 E2F5Q15329 346 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 RHOT1Q8IXI2 618 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 C7orf31Q8N865 590 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 NLRP4Q96MN2 994 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 DDX50Q9BQ39 737 aaKnown RBP4.86□□□□□ -1.63
CHD9-221ENST00000615216 PRKAG2Q9UGJ0 569 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 FER1L4A9Z1Z3 1794 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 PDS5AQ29RF7 1337 aaKnown RBP4.86□□□□□ -1.63
CHD9-221ENST00000615216 SLC4A1P02730 911 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 HDLBPQ00341 1268 aaKnown RBP4.86□□□□□ -1.63
CHD9-221ENST00000615216 TRADDQ15628 312 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 TSGA10IPQ3SY00 556 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 BEND6Q5SZJ8 279 aaPredicted RBP4.86□□□□□ -1.63
CHD9-221ENST00000615216 SFR1Q86XK3 245 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 MB21D2Q8IYB1 491 aaPredicted RBP4.86□□□□□ -1.63
CHD9-221ENST00000615216 INTS2Q9H0H0 1204 aaKnown RBP4.86□□□□□ -1.63
CHD9-221ENST00000615216 GOLPH3LQ9H4A5 285 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 ECT2Q9H8V3 914 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 WDR91A4D1P6 747 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 SYCE1LA8MT33 242 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 TMED1Q13445 227 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 KRT33BQ14525 404 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 TTLL11Q8NHH1 800 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 ING2Q9H160 280 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 VIPAS39Q9H9C1 493 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 GPBP1L1Q9HC44 474 aaPredicted RBP4.86□□□□□ -1.63
CHD9-221ENST00000615216 STX18Q9P2W9 335 aaKnown RBP4.86□□□□□ -1.63
CHD9-221ENST00000615216 INTUQ9ULD6 942 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 CAPN11Q9UMQ6 739 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 UBN2Q6ZU65 1347 aa4.85□□□□□ -1.63
CHD9-221ENST00000615216 ARHGAP10A1A4S6 786 aa4.85□□□□□ -1.63
CHD9-221ENST00000615216 CHUKO15111 745 aa4.85□□□□□ -1.63
CHD9-221ENST00000615216 HUS1O60921 280 aa4.85□□□□□ -1.63
CHD9-221ENST00000615216 GNA15P30679 374 aa4.85□□□□□ -1.63
CHD9-221ENST00000615216 SERPINB4P48594 390 aa4.85□□□□□ -1.63
CHD9-221ENST00000615216 SERPINB10P48595 397 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms