RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 HMGN5P82970 282 aaKnown RBP19.66■□□□□ 0.74
SHKBP1-203ENST00000594298 ITIH3Q06033 890 aa19.66■□□□□ 0.74
SHKBP1-203ENST00000594298 BMS1Q14692 1282 aaKnown RBP19.66■□□□□ 0.74
SHKBP1-203ENST00000594298 NPY5RQ15761 445 aa19.66■□□□□ 0.74
SHKBP1-203ENST00000594298 NECTIN4Q96NY8 510 aa19.66■□□□□ 0.74
SHKBP1-203ENST00000594298 FDXACB1Q9BRP7 624 aaPredicted RBP19.66■□□□□ 0.74
SHKBP1-203ENST00000594298 ADAM7Q9H2U9 754 aa19.66■□□□□ 0.74
SHKBP1-203ENST00000594298 NR2E1Q9Y466 385 aa19.66■□□□□ 0.74
SHKBP1-203ENST00000594298 CCDC194A0A1B0GVG4 234 aa19.65■□□□□ 0.74
SHKBP1-203ENST00000594298 TMEM150BA6NC51 233 aa19.65■□□□□ 0.74
SHKBP1-203ENST00000594298 CLASP2O75122 1294 aaKnown RBP19.65■□□□□ 0.74
SHKBP1-203ENST00000594298 MAFO75444 373 aaPredicted RBP19.65■□□□□ 0.74
SHKBP1-203ENST00000594298 NONOQ15233 471 aaKnown RBP eCLIP19.65■□□□□ 0.74
SHKBP1-203ENST00000594298 CES5AQ6NT32 575 aa19.65■□□□□ 0.74
SHKBP1-203ENST00000594298 TMEM169Q96HH4 297 aa19.65■□□□□ 0.74
SHKBP1-203ENST00000594298 JPH2Q9BR39 696 aaPredicted RBP19.65■□□□□ 0.74
SHKBP1-203ENST00000594298 APOL5Q9BWW9 433 aa19.65■□□□□ 0.74
SHKBP1-203ENST00000594298 SUCLA2Q9P2R7 463 aaPredicted RBP19.65■□□□□ 0.74
SHKBP1-203ENST00000594298 IRAK3Q9Y616 596 aa19.65■□□□□ 0.74
SHKBP1-203ENST00000594298 WDFY4Q6ZS81 3184 aa19.64■□□□□ 0.73
SHKBP1-203ENST00000594298 JAK2O60674 1132 aa19.64■□□□□ 0.73
SHKBP1-203ENST00000594298 ZNF623O75123 536 aa19.64■□□□□ 0.73
SHKBP1-203ENST00000594298 POLGP54098 1239 aaPredicted RBP19.64■□□□□ 0.73
SHKBP1-203ENST00000594298 PSMC5P62195 406 aa19.64■□□□□ 0.73
SHKBP1-203ENST00000594298 GIT2Q14161 759 aa19.64■□□□□ 0.73
SHKBP1-203ENST00000594298 TWF2Q6IBS0 349 aaKnown RBP19.64■□□□□ 0.73
SHKBP1-203ENST00000594298 ANO5Q75V66 913 aa19.64■□□□□ 0.73
SHKBP1-203ENST00000594298 FAM184AQ8NB25 1140 aa19.64■□□□□ 0.73
SHKBP1-203ENST00000594298 ZBP1Q9H171 429 aa19.64■□□□□ 0.73
SHKBP1-203ENST00000594298 FAM105AQ9NUU6 356 aa19.64■□□□□ 0.73
SHKBP1-203ENST00000594298 DDX25Q9UHL0 483 aaKnown RBP19.64■□□□□ 0.73
SHKBP1-203ENST00000594298 TRIOO75962 3097 aa19.63■□□□□ 0.73
SHKBP1-203ENST00000594298 DDX11L8A8MPP1 907 aa19.63■□□□□ 0.73
SHKBP1-203ENST00000594298 NT5C1B-RDH14C9J2C7 533 aa19.63■□□□□ 0.73
SHKBP1-203ENST00000594298 CXCL14O95715 111 aa19.63■□□□□ 0.73
SHKBP1-203ENST00000594298 KRT2P35908 639 aa19.63■□□□□ 0.73
SHKBP1-203ENST00000594298 RAB27AP51159 221 aa19.63■□□□□ 0.73
SHKBP1-203ENST00000594298 TCF15Q12870 199 aa19.63■□□□□ 0.73
SHKBP1-203ENST00000594298 GLB1LQ6UWU2 654 aa19.63■□□□□ 0.73
SHKBP1-203ENST00000594298 DDX53Q86TM3 631 aaKnown RBP19.63■□□□□ 0.73
SHKBP1-203ENST00000594298 RHPN2Q8IUC4 686 aa19.63■□□□□ 0.73
SHKBP1-203ENST00000594298 VPS52Q8N1B4 723 aa19.63■□□□□ 0.73
SHKBP1-203ENST00000594298 NAP1L4Q99733 375 aaKnown RBP19.63■□□□□ 0.73
SHKBP1-203ENST00000594298 SH2D3AQ9BRG2 576 aa19.63■□□□□ 0.73
SHKBP1-203ENST00000594298 POMKQ9H5K3 350 aa19.63■□□□□ 0.73
SHKBP1-203ENST00000594298 PIN4Q9Y237 131 aaKnown RBP19.63■□□□□ 0.73
SHKBP1-203ENST00000594298 KIF3AQ9Y496 699 aa19.63■□□□□ 0.73
SHKBP1-203ENST00000594298 ZC3H11AO75152 810 aaKnown RBP eCLIP19.62■□□□□ 0.73
SHKBP1-203ENST00000594298 OFD1O75665 1012 aa19.62■□□□□ 0.73
SHKBP1-203ENST00000594298 CTSAP10619 480 aa19.62■□□□□ 0.73
SHKBP1-203ENST00000594298 MTHFRP42898 656 aa19.62■□□□□ 0.73
SHKBP1-203ENST00000594298 ST3GAL1Q11201 340 aa19.62■□□□□ 0.73
SHKBP1-203ENST00000594298 PPP2R5CQ13362 524 aa19.62■□□□□ 0.73
SHKBP1-203ENST00000594298 SAFBQ15424 915 aaKnown RBP eCLIP19.62■□□□□ 0.73
SHKBP1-203ENST00000594298 NOMO2Q5JPE7 1267 aa19.62■□□□□ 0.73
SHKBP1-203ENST00000594298 TMEM173Q86WV6 379 aaPredicted RBP19.62■□□□□ 0.73
SHKBP1-203ENST00000594298 LPPQ93052 612 aa19.62■□□□□ 0.73
SHKBP1-203ENST00000594298 IGSF21Q96ID5 467 aa19.62■□□□□ 0.73
SHKBP1-203ENST00000594298 FAM20AQ96MK3 541 aa19.62■□□□□ 0.73
SHKBP1-203ENST00000594298 NRDE2Q9H7Z3 1164 aa19.62■□□□□ 0.73
SHKBP1-203ENST00000594298 IFT122Q9HBG6 1241 aa19.62■□□□□ 0.73
SHKBP1-203ENST00000594298 CYP26B1Q9NR63 512 aa19.62■□□□□ 0.73
SHKBP1-203ENST00000594298 TBC1D13Q9NVG8 400 aa19.62■□□□□ 0.73
SHKBP1-203ENST00000594298 DZANK1Q9NVP4 752 aa19.62■□□□□ 0.73
SHKBP1-203ENST00000594298 PPME1Q9Y570 386 aa19.62■□□□□ 0.73
SHKBP1-203ENST00000594298 WDR81Q562E7 1941 aa19.61■□□□□ 0.73
SHKBP1-203ENST00000594298 EML1O00423 815 aa19.61■□□□□ 0.73
SHKBP1-203ENST00000594298 SLC37A4O43826 429 aa19.61■□□□□ 0.73
SHKBP1-203ENST00000594298 DKC1O60832 514 aaKnown RBP eCLIP19.61■□□□□ 0.73
SHKBP1-203ENST00000594298 DTNBO60941 627 aa19.61■□□□□ 0.73
SHKBP1-203ENST00000594298 GALTP07902 379 aa19.61■□□□□ 0.73
SHKBP1-203ENST00000594298 QARSP47897 775 aaKnown RBP19.61■□□□□ 0.73
SHKBP1-203ENST00000594298 VCPP55072 806 aaKnown RBP19.61■□□□□ 0.73
SHKBP1-203ENST00000594298 INF2Q27J81 1249 aa19.61■□□□□ 0.73
SHKBP1-203ENST00000594298 PPP4R3AQ6IN85 833 aa19.61■□□□□ 0.73
SHKBP1-203ENST00000594298 CATSPER4Q7RTX7 472 aa19.61■□□□□ 0.73
SHKBP1-203ENST00000594298 ZBTB33Q86T24 672 aa19.61■□□□□ 0.73
SHKBP1-203ENST00000594298 KSR1Q8IVT5 923 aa19.61■□□□□ 0.73
SHKBP1-203ENST00000594298 UBALD2Q8IYN6 164 aa19.61■□□□□ 0.73
SHKBP1-203ENST00000594298 KREMEN2Q8NCW0 462 aa19.61■□□□□ 0.73
SHKBP1-203ENST00000594298 RIPOR3Q96MK2 946 aa19.61■□□□□ 0.73
SHKBP1-203ENST00000594298 NLRP4Q96MN2 994 aa19.61■□□□□ 0.73
SHKBP1-203ENST00000594298 PHOX2BQ99453 314 aa19.61■□□□□ 0.73
SHKBP1-203ENST00000594298 KCNMB3Q9NPA1 279 aa19.61■□□□□ 0.73
SHKBP1-203ENST00000594298 TSHZ2Q9NRE2 1034 aa19.61■□□□□ 0.73
SHKBP1-203ENST00000594298 GJB4Q9NTQ9 266 aa19.61■□□□□ 0.73
SHKBP1-203ENST00000594298 AGPAT5Q9NUQ2 364 aa19.61■□□□□ 0.73
SHKBP1-203ENST00000594298 STK39Q9UEW8 545 aa19.61■□□□□ 0.73
SHKBP1-203ENST00000594298 CDH22Q9UJ99 828 aa19.61■□□□□ 0.73
SHKBP1-203ENST00000594298 VAV3Q9UKW4 847 aa19.61■□□□□ 0.73
SHKBP1-203ENST00000594298 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.6■□□□□ 0.73
SHKBP1-203ENST00000594298 MEIS3P2A8K0S8 358 aa19.6■□□□□ 0.73
SHKBP1-203ENST00000594298 C2CD4DB7Z1M9 353 aa19.6■□□□□ 0.73
SHKBP1-203ENST00000594298 SP100P23497 879 aaPredicted RBP19.6■□□□□ 0.73
SHKBP1-203ENST00000594298 AVPR2P30518 371 aa19.6■□□□□ 0.73
SHKBP1-203ENST00000594298 NUBP1P53384 320 aa19.6■□□□□ 0.73
SHKBP1-203ENST00000594298 MTMR3Q13615 1198 aa19.6■□□□□ 0.73
SHKBP1-203ENST00000594298 PLA2G4FQ68DD2 849 aa19.6■□□□□ 0.73
SHKBP1-203ENST00000594298 EXOC8Q8IYI6 725 aa19.6■□□□□ 0.73
SHKBP1-203ENST00000594298 SLC22A17Q8WUG5 538 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms