RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 FAM102BQ5T8I3 360 aa20.79■□□□□ 0.92
PRKCSH-209ENST00000589838 SND1Q7KZF4 910 aaKnown RBP eCLIP20.79■□□□□ 0.926e-11■■■■■ 29.5
PRKCSH-209ENST00000589838 APOBEC3FQ8IUX4 373 aaKnown RBP20.79■□□□□ 0.92
PRKCSH-209ENST00000589838 LMO3Q8TAP4 145 aa20.79■□□□□ 0.92
PRKCSH-209ENST00000589838 CTNNBL1Q8WYA6 563 aaPredicted RBP20.79■□□□□ 0.92
PRKCSH-209ENST00000589838 CAVIN3Q969G5 261 aa20.79■□□□□ 0.92
PRKCSH-209ENST00000589838 GPR88Q9GZN0 384 aa20.79■□□□□ 0.92
PRKCSH-209ENST00000589838 C17orf75Q9HAS0 396 aa20.79■□□□□ 0.92
PRKCSH-209ENST00000589838 NR3C2P08235 984 aa20.79■□□□□ 0.92
PRKCSH-209ENST00000589838 PTPRAP18433 802 aa20.79■□□□□ 0.92
PRKCSH-209ENST00000589838 MCCD1P59942 119 aaPredicted RBP20.79■□□□□ 0.92
PRKCSH-209ENST00000589838 UGCGQ16739 394 aa20.79■□□□□ 0.92
PRKCSH-209ENST00000589838 GLYCTKQ8IVS8 523 aa20.79■□□□□ 0.92
PRKCSH-209ENST00000589838 GSPT2Q8IYD1 628 aaKnown RBP20.79■□□□□ 0.92
PRKCSH-209ENST00000589838 NSUN6Q8TEA1 469 aaKnown RBP20.79■□□□□ 0.92
PRKCSH-209ENST00000589838 RFFLQ8WZ73 363 aa20.79■□□□□ 0.92
PRKCSH-209ENST00000589838 CDHR1Q96JP9 859 aa20.79■□□□□ 0.92
PRKCSH-209ENST00000589838 SYT11Q9BT88 431 aa20.79■□□□□ 0.92
PRKCSH-209ENST00000589838 GDF3Q9NR23 364 aa20.79■□□□□ 0.92
PRKCSH-209ENST00000589838 USP20Q9Y2K6 914 aa20.79■□□□□ 0.92
PRKCSH-209ENST00000589838 PHIPQ8WWQ0 1821 aa20.78■□□□□ 0.92
PRKCSH-209ENST00000589838 GOLGA6BA6NDN3 693 aa20.78■□□□□ 0.92
PRKCSH-209ENST00000589838 SLC16A4O15374 487 aa20.78■□□□□ 0.92
PRKCSH-209ENST00000589838 ZBTB7AO95365 584 aa20.78■□□□□ 0.92
PRKCSH-209ENST00000589838 CCNE2O96020 404 aa20.78■□□□□ 0.92
PRKCSH-209ENST00000589838 DSG3P32926 999 aa20.78■□□□□ 0.92
PRKCSH-209ENST00000589838 PAK2Q13177 524 aa20.78■□□□□ 0.92
PRKCSH-209ENST00000589838 ARHGAP44Q17R89 818 aa20.78■□□□□ 0.92
PRKCSH-209ENST00000589838 PHLDB3Q6NSJ2 640 aa20.78■□□□□ 0.92
PRKCSH-209ENST00000589838 KIFAP3Q92845 792 aa20.78■□□□□ 0.92
PRKCSH-209ENST00000589838 ATP6V0A1Q93050 837 aa20.78■□□□□ 0.92
PRKCSH-209ENST00000589838 CBWD1Q9BRT8 395 aa20.78■□□□□ 0.92
PRKCSH-209ENST00000589838 TMEM59LQ9UK28 342 aa20.78■□□□□ 0.92
PRKCSH-209ENST00000589838 AMFRQ9UKV5 643 aa20.78■□□□□ 0.92
PRKCSH-209ENST00000589838 DIS3Q9Y2L1 958 aaKnown RBP20.78■□□□□ 0.92
PRKCSH-209ENST00000589838 TMCO5BA8MYB1 307 aa20.77■□□□□ 0.92
PRKCSH-209ENST00000589838 FZD9O00144 591 aa20.77■□□□□ 0.92
PRKCSH-209ENST00000589838 CEP104O60308 925 aa20.77■□□□□ 0.92
PRKCSH-209ENST00000589838 SYF2O95926 243 aaKnown RBP20.77■□□□□ 0.92
PRKCSH-209ENST00000589838 GYS2P54840 703 aa20.77■□□□□ 0.92
PRKCSH-209ENST00000589838 DMP1Q13316 513 aaPredicted RBP20.77■□□□□ 0.92
PRKCSH-209ENST00000589838 EPC2Q52LR7 807 aa20.77■□□□□ 0.92
PRKCSH-209ENST00000589838 TAF3Q5VWG9 929 aa20.77■□□□□ 0.92
PRKCSH-209ENST00000589838 ALS2CLQ60I27 953 aa20.77■□□□□ 0.92
PRKCSH-209ENST00000589838 SNRNP48Q6IEG0 339 aaKnown RBP20.77■□□□□ 0.92
PRKCSH-209ENST00000589838 DAAM2Q86T65 1068 aa20.77■□□□□ 0.92
PRKCSH-209ENST00000589838 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.77■□□□□ 0.92
PRKCSH-209ENST00000589838 KRT12Q99456 494 aa20.77■□□□□ 0.92
PRKCSH-209ENST00000589838 UBE2TQ9NPD8 197 aaPredicted RBP20.77■□□□□ 0.92
PRKCSH-209ENST00000589838 ADAMTS5Q9UNA0 930 aa20.77■□□□□ 0.92
PRKCSH-209ENST00000589838 STXBP5LQ9Y2K9 1186 aa20.77■□□□□ 0.92
PRKCSH-209ENST00000589838 COL11A1P12107 1806 aaPredicted RBP20.77■□□□□ 0.92
PRKCSH-209ENST00000589838 PGRMC1O00264 195 aaKnown RBP20.77■□□□□ 0.92
PRKCSH-209ENST00000589838 RNF40O75150 1001 aa20.77■□□□□ 0.92
PRKCSH-209ENST00000589838 STAM2O75886 525 aa20.77■□□□□ 0.92
PRKCSH-209ENST00000589838 HEXIM1O94992 359 aaKnown RBP20.77■□□□□ 0.92
PRKCSH-209ENST00000589838 REPS2Q8NFH8 660 aa20.77■□□□□ 0.92
PRKCSH-209ENST00000589838 SPIRE2Q8WWL2 714 aa20.77■□□□□ 0.92
PRKCSH-209ENST00000589838 GDAP1L1Q96MZ0 367 aa20.77■□□□□ 0.92
PRKCSH-209ENST00000589838 WRNIP1Q96S55 665 aa20.77■□□□□ 0.92
PRKCSH-209ENST00000589838 AGPAT1Q99943 283 aa20.77■□□□□ 0.92
PRKCSH-209ENST00000589838 TBX20Q9UMR3 447 aa20.77■□□□□ 0.92
PRKCSH-209ENST00000589838 WDR81Q562E7 1941 aa20.76■□□□□ 0.91
PRKCSH-209ENST00000589838 ZC3H4Q9UPT8 1303 aaKnown RBP20.76■□□□□ 0.91
PRKCSH-209ENST00000589838 ANKRD62A6NC57 917 aa20.76■□□□□ 0.91
PRKCSH-209ENST00000589838 ERICH4A6NGS2 130 aa20.76■□□□□ 0.91
PRKCSH-209ENST00000589838 CCDC169A6NNP5 214 aa20.76■□□□□ 0.91
PRKCSH-209ENST00000589838 CCDC188H7C350 402 aa20.76■□□□□ 0.91
PRKCSH-209ENST00000589838 FOXN3O00409 490 aaPredicted RBP20.76■□□□□ 0.91
PRKCSH-209ENST00000589838 ATP2A1O14983 1001 aa20.76■□□□□ 0.91
PRKCSH-209ENST00000589838 OPA1O60313 960 aa20.76■□□□□ 0.91
PRKCSH-209ENST00000589838 PSAPP07602 524 aa20.76■□□□□ 0.91
PRKCSH-209ENST00000589838 ABCD1P33897 745 aa20.76■□□□□ 0.91
PRKCSH-209ENST00000589838 LMAN1P49257 510 aa20.76■□□□□ 0.91
PRKCSH-209ENST00000589838 DLG4P78352 724 aa20.76■□□□□ 0.91
PRKCSH-209ENST00000589838 USP37Q86T82 979 aa20.76■□□□□ 0.91
PRKCSH-209ENST00000589838 EIF1ADQ8N9N8 165 aaKnown RBP20.76■□□□□ 0.91
PRKCSH-209ENST00000589838 SCFD2Q8WU76 684 aa20.76■□□□□ 0.91
PRKCSH-209ENST00000589838 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.76■□□□□ 0.913e-13■■■□□ 18.9
PRKCSH-209ENST00000589838 MTFR1LQ9H019 292 aa20.76■□□□□ 0.91
PRKCSH-209ENST00000589838 KCNG1Q9UIX4 513 aa20.76■□□□□ 0.91
PRKCSH-209ENST00000589838 BCS1LQ9Y276 419 aa20.76■□□□□ 0.91
PRKCSH-209ENST00000589838 RIPK3Q9Y572 518 aa20.76■□□□□ 0.91
PRKCSH-209ENST00000589838 NFASCO94856 1347 aa20.76■□□□□ 0.91
PRKCSH-209ENST00000589838 GGCXP38435 758 aa20.75■□□□□ 0.91
PRKCSH-209ENST00000589838 GCLMP48507 274 aa20.75■□□□□ 0.91
PRKCSH-209ENST00000589838 MXI1P50539 228 aa20.75■□□□□ 0.91
PRKCSH-209ENST00000589838 PPP3CAQ08209 521 aa20.75■□□□□ 0.91
PRKCSH-209ENST00000589838 PLA2G4FQ68DD2 849 aa20.75■□□□□ 0.91
PRKCSH-209ENST00000589838 NT5DC3Q86UY8 548 aa20.75■□□□□ 0.91
PRKCSH-209ENST00000589838 MAP4K3Q8IVH8 894 aa20.75■□□□□ 0.91
PRKCSH-209ENST00000589838 TMEM161BQ8NDZ6 487 aa20.75■□□□□ 0.91
PRKCSH-209ENST00000589838 OLIG1Q8TAK6 271 aa20.75■□□□□ 0.91
PRKCSH-209ENST00000589838 SLC35G2Q8TBE7 412 aa20.75■□□□□ 0.91
PRKCSH-209ENST00000589838 NTPCRQ9BSD7 190 aaKnown RBP20.75■□□□□ 0.91
PRKCSH-209ENST00000589838 EPB41L5Q9HCM4 733 aa20.75■□□□□ 0.91
PRKCSH-209ENST00000589838 KMT5AQ9NQR1 393 aa20.75■□□□□ 0.91
PRKCSH-209ENST00000589838 TMOD4Q9NZQ9 345 aa20.75■□□□□ 0.91
PRKCSH-209ENST00000589838 CALCOCO1Q9P1Z2 691 aa20.75■□□□□ 0.91
PRKCSH-209ENST00000589838 RLFQ13129 1914 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms