RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 ARID2Q68CP9 1835 aa21.62■■□□□ 1.05
CIRBP-220ENST00000588917 CCDC169A6NNP5 214 aa21.61■■□□□ 1.05
CIRBP-220ENST00000588917 SFI1A8K8P3 1242 aa21.61■■□□□ 1.05
CIRBP-220ENST00000588917 KINO60870 393 aaKnown RBP21.61■■□□□ 1.05
CIRBP-220ENST00000588917 EFCAB14O75071 495 aa21.61■■□□□ 1.05
CIRBP-220ENST00000588917 FGBP02675 491 aa21.61■■□□□ 1.05
CIRBP-220ENST00000588917 GHRP10912 638 aa21.61■■□□□ 1.05
CIRBP-220ENST00000588917 AFMP43652 599 aa21.61■■□□□ 1.05
CIRBP-220ENST00000588917 PEX3P56589 373 aa21.61■■□□□ 1.05
CIRBP-220ENST00000588917 MAPK7Q13164 816 aa21.61■■□□□ 1.05
CIRBP-220ENST00000588917 MBTPS1Q14703 1052 aa21.61■■□□□ 1.05
CIRBP-220ENST00000588917 GPNMBQ14956 572 aa21.61■■□□□ 1.05
CIRBP-220ENST00000588917 SHHQ15465 462 aa21.61■■□□□ 1.05
CIRBP-220ENST00000588917 CNKSR3Q6P9H4 555 aa21.61■■□□□ 1.05
CIRBP-220ENST00000588917 PSRC1Q6PGN9 363 aaPredicted RBP21.61■■□□□ 1.05
CIRBP-220ENST00000588917 ELOA2Q8IYF1 753 aaPredicted RBP21.61■■□□□ 1.05
CIRBP-220ENST00000588917 STAMQ92783 540 aa21.61■■□□□ 1.05
CIRBP-220ENST00000588917 DNAJC19Q96DA6 116 aa21.61■■□□□ 1.05
CIRBP-220ENST00000588917 FTHL17Q9BXU8 183 aa21.61■■□□□ 1.05
CIRBP-220ENST00000588917 IFIH1Q9BYX4 1025 aaKnown RBP21.61■■□□□ 1.05
CIRBP-220ENST00000588917 ZHX3Q9H4I2 956 aa21.61■■□□□ 1.05
CIRBP-220ENST00000588917 POLD4Q9HCU8 107 aa21.61■■□□□ 1.05
CIRBP-220ENST00000588917 KMT5AQ9NQR1 393 aa21.61■■□□□ 1.05
CIRBP-220ENST00000588917 PADI3Q9ULW8 664 aa21.61■■□□□ 1.05
CIRBP-220ENST00000588917 NOC2LQ9Y3T9 749 aaKnown RBP21.61■■□□□ 1.05
CIRBP-220ENST00000588917 PVALEFA0A1B0GWK0 134 aa21.6■■□□□ 1.05
CIRBP-220ENST00000588917 MAPTP10636 758 aaKnown RBP21.6■■□□□ 1.05
CIRBP-220ENST00000588917 IDEP14735 1019 aa21.6■■□□□ 1.05
CIRBP-220ENST00000588917 NPTX2P47972 431 aa21.6■■□□□ 1.05
CIRBP-220ENST00000588917 NFX1Q12986 1120 aaKnown RBP21.6■■□□□ 1.05
CIRBP-220ENST00000588917 IKBKEQ14164 716 aa21.6■■□□□ 1.05
CIRBP-220ENST00000588917 ZNF668Q96K58 619 aaPredicted RBP21.6■■□□□ 1.05
CIRBP-220ENST00000588917 LMBRD1Q9NUN5 540 aa21.6■■□□□ 1.05
CIRBP-220ENST00000588917 PANK4Q9NVE7 773 aa21.6■■□□□ 1.05
CIRBP-220ENST00000588917 ST3GAL5Q9UNP4 418 aa21.6■■□□□ 1.05
CIRBP-220ENST00000588917 EVPLQ92817 2033 aa21.6■■□□□ 1.05
CIRBP-220ENST00000588917 K7ERI5 159 aa21.59■■□□□ 1.05
CIRBP-220ENST00000588917 TRAK2O60296 914 aa21.59■■□□□ 1.05
CIRBP-220ENST00000588917 HERC4Q5GLZ8 1057 aaPredicted RBP21.59■■□□□ 1.05
CIRBP-220ENST00000588917 CDCA2Q69YH5 1023 aaPredicted RBP21.59■■□□□ 1.05
CIRBP-220ENST00000588917 DBF4BQ8NFT6 615 aa21.59■■□□□ 1.05
CIRBP-220ENST00000588917 TMEM40Q8WWA1 233 aa21.59■■□□□ 1.05
CIRBP-220ENST00000588917 CCDC47Q96A33 483 aaKnown RBP21.59■■□□□ 1.05
CIRBP-220ENST00000588917 MTIF3Q9H2K0 278 aaKnown RBP21.59■■□□□ 1.05
CIRBP-220ENST00000588917 TMEM134Q9H6X4 195 aa21.59■■□□□ 1.05
CIRBP-220ENST00000588917 CHST12Q9NRB3 414 aa21.59■■□□□ 1.05
CIRBP-220ENST00000588917 PRMT7Q9NVM4 692 aaPredicted RBP21.59■■□□□ 1.05
CIRBP-220ENST00000588917 ABHD14A-ACY1A0A1B0GW23 586 aa21.58■■□□□ 1.05
CIRBP-220ENST00000588917 INO80B-WBP1J3KQ70 363 aa21.58■■□□□ 1.05
CIRBP-220ENST00000588917 GTPBP6O43824 516 aaPredicted RBP21.58■■□□□ 1.05
CIRBP-220ENST00000588917 NR1I2O75469 434 aa21.58■■□□□ 1.05
CIRBP-220ENST00000588917 BAIAP3O94812 1187 aa21.58■■□□□ 1.05
CIRBP-220ENST00000588917 ZSCAN20P17040 1043 aaPredicted RBP21.58■■□□□ 1.05
CIRBP-220ENST00000588917 LIG1P18858 919 aa21.58■■□□□ 1.05
CIRBP-220ENST00000588917 AXLP30530 894 aa21.58■■□□□ 1.05
CIRBP-220ENST00000588917 CD52P31358 61 aa21.58■■□□□ 1.05
CIRBP-220ENST00000588917 ASIC1P78348 528 aa21.58■■□□□ 1.05
CIRBP-220ENST00000588917 CACNB1Q02641 598 aaPredicted RBP21.58■■□□□ 1.05
CIRBP-220ENST00000588917 MAPK6Q16659 721 aa21.58■■□□□ 1.05
CIRBP-220ENST00000588917 C9orf50Q5SZB4 431 aa21.58■■□□□ 1.05
CIRBP-220ENST00000588917 ZNF697Q5TEC3 545 aa21.58■■□□□ 1.05
CIRBP-220ENST00000588917 CATSPER4Q7RTX7 472 aa21.58■■□□□ 1.05
CIRBP-220ENST00000588917 FAM178BQ8IXR5 827 aa21.58■■□□□ 1.05
CIRBP-220ENST00000588917 BSNDQ8WZ55 320 aa21.58■■□□□ 1.05
CIRBP-220ENST00000588917 PRIMPOLQ96LW4 560 aa21.58■■□□□ 1.05
CIRBP-220ENST00000588917 GUCD1Q96NT3 240 aa21.58■■□□□ 1.05
CIRBP-220ENST00000588917 AGO3Q9H9G7 860 aaKnown RBP21.58■■□□□ 1.05
CIRBP-220ENST00000588917 RNF216Q9NWF9 866 aaPredicted RBP21.58■■□□□ 1.05
CIRBP-220ENST00000588917 CUL9Q8IWT3 2517 aa21.57■■□□□ 1.04
CIRBP-220ENST00000588917 FRMD3A2A2Y4 597 aa21.57■■□□□ 1.04
CIRBP-220ENST00000588917 ERLIN2O94905 339 aa21.57■■□□□ 1.04
CIRBP-220ENST00000588917 ACRP10323 421 aa21.57■■□□□ 1.04
CIRBP-220ENST00000588917 PTMSP20962 102 aa21.57■■□□□ 1.04
CIRBP-220ENST00000588917 UNC13DQ70J99 1090 aa21.57■■□□□ 1.04
CIRBP-220ENST00000588917 ZNF365Q70YC5 407 aa21.57■■□□□ 1.04
CIRBP-220ENST00000588917 FAM228AQ86W67 206 aa21.57■■□□□ 1.04
CIRBP-220ENST00000588917 KCNN1Q92952 543 aa21.57■■□□□ 1.04
CIRBP-220ENST00000588917 FAM161BQ96MY7 647 aa21.57■■□□□ 1.04
CIRBP-220ENST00000588917 FZD8Q9H461 694 aa21.57■■□□□ 1.04
CIRBP-220ENST00000588917 ERVK-5Q9HDB9 667 aa21.57■■□□□ 1.04
CIRBP-220ENST00000588917 OLFML3Q9NRN5 406 aa21.57■■□□□ 1.04
CIRBP-220ENST00000588917 DACT1Q9NYF0 836 aa21.57■■□□□ 1.04
CIRBP-220ENST00000588917 NCKAP1LP55160 1127 aa21.56■■□□□ 1.04
CIRBP-220ENST00000588917 MBTD1Q05BQ5 628 aa21.56■■□□□ 1.04
CIRBP-220ENST00000588917 STRN3Q13033 797 aa21.56■■□□□ 1.04
CIRBP-220ENST00000588917 PSMD2Q13200 908 aa21.56■■□□□ 1.04
CIRBP-220ENST00000588917 CUL4BQ13620 913 aa21.56■■□□□ 1.04
CIRBP-220ENST00000588917 FAM187BQ17R55 369 aa21.56■■□□□ 1.04
CIRBP-220ENST00000588917 TMEM240Q5SV17 173 aa21.56■■□□□ 1.04
CIRBP-220ENST00000588917 STXBP4Q6ZWJ1 553 aa21.56■■□□□ 1.04
CIRBP-220ENST00000588917 C16orf59Q7L2K0 433 aa21.56■■□□□ 1.04
CIRBP-220ENST00000588917 ST6GALNAC4Q9H4F1 302 aa21.56■■□□□ 1.04
CIRBP-220ENST00000588917 ARHGAP28Q9P2N2 729 aa21.56■■□□□ 1.04
CIRBP-220ENST00000588917 PCDHB13Q9Y5F0 798 aa21.56■■□□□ 1.04
CIRBP-220ENST00000588917 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.55■■□□□ 1.04
CIRBP-220ENST00000588917 SLC16A4O15374 487 aa21.55■■□□□ 1.04
CIRBP-220ENST00000588917 SMC2O95347 1197 aa21.55■■□□□ 1.04
CIRBP-220ENST00000588917 ALCAMQ13740 583 aa21.55■■□□□ 1.04
CIRBP-220ENST00000588917 POSTNQ15063 836 aa21.55■■□□□ 1.04
CIRBP-220ENST00000588917 PPP4R3CPQ6ZMV5 832 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms