RNA–Protein interactions for RNA: ENST00000588749.1

CACTIN-206, Transcript of cactin, spliceosome C complex subunit, humanhuman

TSL 3

Gene CACTIN, Length 391 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-206ENST00000588749 CASD1Q96PB1 797 aa16.09■□□□□ 0.17
CACTIN-206ENST00000588749 TRAIPQ9BWF2 469 aa16.09■□□□□ 0.17
CACTIN-206ENST00000588749 ALG13Q9NP73 1137 aaKnown RBP16.09■□□□□ 0.17
CACTIN-206ENST00000588749 FAM105AQ9NUU6 356 aa16.09■□□□□ 0.17
CACTIN-206ENST00000588749 DDX19AQ9NUU7 478 aaKnown RBP16.09■□□□□ 0.17
CACTIN-206ENST00000588749 TYW1Q9NV66 732 aaKnown RBP16.09■□□□□ 0.17
CACTIN-206ENST00000588749 STK24Q9Y6E0 443 aa16.09■□□□□ 0.17
CACTIN-206ENST00000588749 INO80B-WBP1J3KQ70 363 aa16.08■□□□□ 0.16
CACTIN-206ENST00000588749 EOMESO95936 686 aa16.08■□□□□ 0.16
CACTIN-206ENST00000588749 ITGB1P05556 798 aa16.08■□□□□ 0.16
CACTIN-206ENST00000588749 SKIP12755 728 aa16.08■□□□□ 0.16
CACTIN-206ENST00000588749 RAB27AP51159 221 aa16.08■□□□□ 0.16
CACTIN-206ENST00000588749 TFF2Q03403 129 aa16.08■□□□□ 0.16
CACTIN-206ENST00000588749 IFNLR1Q8IU57 520 aaPredicted RBP16.08■□□□□ 0.16
CACTIN-206ENST00000588749 HELQQ8TDG4 1101 aa16.08■□□□□ 0.16
CACTIN-206ENST00000588749 LPPQ93052 612 aa16.08■□□□□ 0.16
CACTIN-206ENST00000588749 INTS4Q96HW7 963 aaKnown RBP16.08■□□□□ 0.16
CACTIN-206ENST00000588749 LMAN2LQ9H0V9 348 aa16.08■□□□□ 0.16
CACTIN-206ENST00000588749 BHMT2Q9H2M3 363 aa16.08■□□□□ 0.16
CACTIN-206ENST00000588749 AAASQ9NRG9 546 aa16.08■□□□□ 0.16
CACTIN-206ENST00000588749 PLAGL2Q9UPG8 496 aa16.08■□□□□ 0.16
CACTIN-206ENST00000588749 PCDHB12Q9Y5F1 795 aa16.08■□□□□ 0.16
CACTIN-206ENST00000588749 PLXNA4Q9HCM2 1894 aa16.08■□□□□ 0.16
CACTIN-206ENST00000588749 VWA3AA6NCI4 1184 aa16.07■□□□□ 0.16
CACTIN-206ENST00000588749 LRRIQ4A6NIV6 560 aa16.07■□□□□ 0.16
CACTIN-206ENST00000588749 DLL1O00548 723 aa16.07■□□□□ 0.16
CACTIN-206ENST00000588749 TSPAN1O60635 241 aa16.07■□□□□ 0.16
CACTIN-206ENST00000588749 LAG3P18627 525 aa16.07■□□□□ 0.16
CACTIN-206ENST00000588749 CYP11B2P19099 503 aa16.07■□□□□ 0.16
CACTIN-206ENST00000588749 HOXA11P31270 313 aaPredicted RBP16.07■□□□□ 0.16
CACTIN-206ENST00000588749 MRPS5P82675 430 aaKnown RBP16.07■□□□□ 0.16
CACTIN-206ENST00000588749 MBTD1Q05BQ5 628 aa16.07■□□□□ 0.16
CACTIN-206ENST00000588749 POU5F1BQ06416 359 aa16.07■□□□□ 0.16
CACTIN-206ENST00000588749 ZRSR1Q15695 479 aaKnown RBP16.07■□□□□ 0.16
CACTIN-206ENST00000588749 NAALADL2Q58DX5 795 aa16.07■□□□□ 0.16
CACTIN-206ENST00000588749 TCEAL5Q5H9L2 206 aa16.07■□□□□ 0.16
CACTIN-206ENST00000588749 TJAP1Q5JTD0 557 aa16.07■□□□□ 0.16
CACTIN-206ENST00000588749 COLGALT1Q8NBJ5 622 aa16.07■□□□□ 0.16
CACTIN-206ENST00000588749 HLA-CQ95604 372 aa16.07■□□□□ 0.16
CACTIN-206ENST00000588749 ASB2Q96Q27 587 aa16.07■□□□□ 0.16
CACTIN-206ENST00000588749 NSUN3Q9H649 340 aaKnown RBP16.07■□□□□ 0.16
CACTIN-206ENST00000588749 CWH43Q9H720 699 aa16.07■□□□□ 0.16
CACTIN-206ENST00000588749 COG5Q9UP83 839 aa16.07■□□□□ 0.16
CACTIN-206ENST00000588749 PCDHB2Q9Y5E7 798 aa16.07■□□□□ 0.16
CACTIN-206ENST00000588749 VCANP13611 3396 aa16.06■□□□□ 0.16
CACTIN-206ENST00000588749 MEIS3P2A8K0S8 358 aa16.06■□□□□ 0.16
CACTIN-206ENST00000588749 E9PMD0 336 aa16.06■□□□□ 0.16
CACTIN-206ENST00000588749 SYT1P21579 422 aa16.06■□□□□ 0.16
CACTIN-206ENST00000588749 DNAJB1P25685 340 aa16.06■□□□□ 0.16
CACTIN-206ENST00000588749 PCBP1Q15365 356 aaKnown RBP eCLIP16.06■□□□□ 0.16
CACTIN-206ENST00000588749 UBXN11Q5T124 520 aa16.06■□□□□ 0.16
CACTIN-206ENST00000588749 ARL6IP4Q66PJ3 421 aaKnown RBP16.06■□□□□ 0.16
CACTIN-206ENST00000588749 LRRC55Q6ZSA7 311 aa16.06■□□□□ 0.16
CACTIN-206ENST00000588749 THNSL1Q8IYQ7 743 aa16.06■□□□□ 0.16
CACTIN-206ENST00000588749 SPPL3Q8TCT6 385 aa16.06■□□□□ 0.16
CACTIN-206ENST00000588749 CPB2Q96IY4 423 aa16.06■□□□□ 0.16
CACTIN-206ENST00000588749 MMTAG2Q9BU76 263 aaKnown RBP16.06■□□□□ 0.16
CACTIN-206ENST00000588749 COL25A1Q9BXS0 654 aaPredicted RBP16.06■□□□□ 0.16
CACTIN-206ENST00000588749 NFKBIZQ9BYH8 718 aa16.06■□□□□ 0.16
CACTIN-206ENST00000588749 DNM3Q9UQ16 869 aa16.06■□□□□ 0.16
CACTIN-206ENST00000588749 SPTBN5Q9NRC6 3674 aaKnown RBP16.06■□□□□ 0.16
CACTIN-206ENST00000588749 ZNF623O75123 536 aa16.05■□□□□ 0.16
CACTIN-206ENST00000588749 PBX3P40426 434 aa16.05■□□□□ 0.16
CACTIN-206ENST00000588749 NCBP1Q09161 790 aaKnown RBP16.05■□□□□ 0.16
CACTIN-206ENST00000588749 CAMK1Q14012 370 aa16.05■□□□□ 0.16
CACTIN-206ENST00000588749 AMHR2Q16671 573 aa16.05■□□□□ 0.16
CACTIN-206ENST00000588749 AAK1Q2M2I8 961 aa16.05■□□□□ 0.16
CACTIN-206ENST00000588749 NOTUMQ6P988 496 aa16.05■□□□□ 0.16
CACTIN-206ENST00000588749 GLB1LQ6UWU2 654 aa16.05■□□□□ 0.16
CACTIN-206ENST00000588749 POF1BQ8WVV4 589 aa16.05■□□□□ 0.16
CACTIN-206ENST00000588749 BSNDQ8WZ55 320 aa16.05■□□□□ 0.16
CACTIN-206ENST00000588749 SNX21Q969T3 373 aa16.05■□□□□ 0.16
CACTIN-206ENST00000588749 PGBD4Q96DM1 585 aa16.05■□□□□ 0.16
CACTIN-206ENST00000588749 MRPL9Q9BYD2 267 aaKnown RBP16.05■□□□□ 0.16
CACTIN-206ENST00000588749 INPP5FQ9Y2H2 1132 aa16.05■□□□□ 0.16
CACTIN-206ENST00000588749 B4GALT5O43286 388 aa16.04■□□□□ 0.16
CACTIN-206ENST00000588749 FGF18O76093 207 aa16.04■□□□□ 0.16
CACTIN-206ENST00000588749 EYA4O95677 639 aa16.04■□□□□ 0.16
CACTIN-206ENST00000588749 BMP15O95972 392 aa16.04■□□□□ 0.16
CACTIN-206ENST00000588749 ARF4P18085 180 aaPredicted RBP16.04■□□□□ 0.16
CACTIN-206ENST00000588749 AXLP30530 894 aa16.04■□□□□ 0.16
CACTIN-206ENST00000588749 KCNQ1P51787 676 aa16.04■□□□□ 0.16
CACTIN-206ENST00000588749 RESTQ13127 1097 aa16.04■□□□□ 0.16
CACTIN-206ENST00000588749 SF3A1Q15459 793 aaKnown RBP16.04■□□□□ 0.16
CACTIN-206ENST00000588749 CSPP1Q1MSJ5 1256 aa16.04■□□□□ 0.16
CACTIN-206ENST00000588749 CDCA2Q69YH5 1023 aaPredicted RBP16.04■□□□□ 0.16
CACTIN-206ENST00000588749 KCNT2Q6UVM3 1135 aa16.04■□□□□ 0.16
CACTIN-206ENST00000588749 KCNK18Q7Z418 384 aa16.04■□□□□ 0.16
CACTIN-206ENST00000588749 HSCBQ8IWL3 235 aa16.04■□□□□ 0.16
CACTIN-206ENST00000588749 ZBTB8OSQ8IWT0 167 aa16.04■□□□□ 0.16
CACTIN-206ENST00000588749 CCDC51Q96ER9 411 aa16.04■□□□□ 0.16
CACTIN-206ENST00000588749 ZNF558Q96NG5 402 aa16.04■□□□□ 0.16
CACTIN-206ENST00000588749 PLIN2Q99541 437 aa16.04■□□□□ 0.16
CACTIN-206ENST00000588749 EIF2AQ9BY44 585 aaKnown RBP16.04■□□□□ 0.16
CACTIN-206ENST00000588749 UBE2ZQ9H832 354 aaPredicted RBP16.04■□□□□ 0.16
CACTIN-206ENST00000588749 POLD4Q9HCU8 107 aa16.04■□□□□ 0.16
CACTIN-206ENST00000588749 TCF20Q9UGU0 1960 aaKnown RBP16.04■□□□□ 0.16
CACTIN-206ENST00000588749 IRS1P35568 1242 aa16.03■□□□□ 0.16
CACTIN-206ENST00000588749 NAMPTP43490 491 aa16.03■□□□□ 0.16
CACTIN-206ENST00000588749 PPP2R5AQ15172 486 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 143.9 ms