RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 ASAP3Q8TDY4 903 aa23.88■■□□□ 1.41
PPP4R1-228ENST00000584074 POLR3CQ9BUI4 534 aaPredicted RBP23.88■■□□□ 1.41
PPP4R1-228ENST00000584074 FAM105AQ9NUU6 356 aa23.88■■□□□ 1.41
PPP4R1-228ENST00000584074 KIF3AQ9Y496 699 aa23.88■■□□□ 1.41
PPP4R1-228ENST00000584074 TCF20Q9UGU0 1960 aaKnown RBP23.88■■□□□ 1.41
PPP4R1-228ENST00000584074 ARID2Q68CP9 1835 aa23.87■■□□□ 1.41
PPP4R1-228ENST00000584074 ATG2AQ2TAZ0 1938 aa23.87■■□□□ 1.41
PPP4R1-228ENST00000584074 MEIS3P2A8K0S8 358 aa23.87■■□□□ 1.41
PPP4R1-228ENST00000584074 NCK2O43639 380 aa23.87■■□□□ 1.41
PPP4R1-228ENST00000584074 HOXA11P31270 313 aaPredicted RBP23.87■■□□□ 1.41
PPP4R1-228ENST00000584074 ARL2P36404 184 aa23.87■■□□□ 1.41
PPP4R1-228ENST00000584074 LTBRP36941 435 aa23.87■■□□□ 1.41
PPP4R1-228ENST00000584074 UBE3AQ05086 875 aa23.87■■□□□ 1.41
PPP4R1-228ENST00000584074 CSPP1Q1MSJ5 1256 aa23.87■■□□□ 1.41
PPP4R1-228ENST00000584074 POTEGQ6S5H5 508 aa23.87■■□□□ 1.41
PPP4R1-228ENST00000584074 KCNT2Q6UVM3 1135 aa23.87■■□□□ 1.41
PPP4R1-228ENST00000584074 PCDHB6Q9Y5E3 794 aa23.87■■□□□ 1.41
PPP4R1-228ENST00000584074 LINC01565O15544 149 aa23.86■■□□□ 1.41
PPP4R1-228ENST00000584074 USO1O60763 962 aaKnown RBP23.86■■□□□ 1.41
PPP4R1-228ENST00000584074 ZNF623O75123 536 aa23.86■■□□□ 1.41
PPP4R1-228ENST00000584074 SKIP12755 728 aa23.86■■□□□ 1.41
PPP4R1-228ENST00000584074 PTENP60484 403 aa23.86■■□□□ 1.41
PPP4R1-228ENST00000584074 DLX2Q07687 328 aaPredicted RBP23.86■■□□□ 1.41
PPP4R1-228ENST00000584074 PTCRAQ6ISU1 281 aaPredicted RBP23.86■■□□□ 1.41
PPP4R1-228ENST00000584074 ERMNQ8TAM6 284 aa23.86■■□□□ 1.41
PPP4R1-228ENST00000584074 MICAL1Q8TDZ2 1067 aa23.86■■□□□ 1.41
PPP4R1-228ENST00000584074 ZNF558Q96NG5 402 aa23.86■■□□□ 1.41
PPP4R1-228ENST00000584074 NACC1Q96RE7 527 aa23.86■■□□□ 1.41
PPP4R1-228ENST00000584074 PCDHB2Q9Y5E7 798 aa23.86■■□□□ 1.41
PPP4R1-228ENST00000584074 BRWD1Q9NSI6 2320 aa23.85■■□□□ 1.41
PPP4R1-228ENST00000584074 GLRA2P23416 452 aa23.85■■□□□ 1.41
PPP4R1-228ENST00000584074 RPA1P27694 616 aa23.85■■□□□ 1.41
PPP4R1-228ENST00000584074 GJB2P29033 226 aa23.85■■□□□ 1.41
PPP4R1-228ENST00000584074 RAB27AP51159 221 aa23.85■■□□□ 1.41
PPP4R1-228ENST00000584074 ERVFC1P60507 584 aa23.85■■□□□ 1.41
PPP4R1-228ENST00000584074 CAPSQ13938 189 aa23.85■■□□□ 1.41
PPP4R1-228ENST00000584074 TFDP1Q14186 410 aa23.85■■□□□ 1.41
PPP4R1-228ENST00000584074 MCTP1Q6DN14 999 aa23.85■■□□□ 1.41
PPP4R1-228ENST00000584074 MAEAQ7L5Y9 396 aa23.85■■□□□ 1.41
PPP4R1-228ENST00000584074 RBM23Q86U06 439 aaKnown RBP23.85■■□□□ 1.41
PPP4R1-228ENST00000584074 POLR3FQ9H1D9 316 aaPredicted RBP23.85■■□□□ 1.41
PPP4R1-228ENST00000584074 GPRC5CQ9NQ84 441 aa23.85■■□□□ 1.41
PPP4R1-228ENST00000584074 TLR9Q9NR96 1032 aa23.85■■□□□ 1.41
PPP4R1-228ENST00000584074 DBR1Q9UK59 544 aaKnown RBP23.85■■□□□ 1.41
PPP4R1-228ENST00000584074 MYO7AQ13402 2215 aa23.85■■□□□ 1.41
PPP4R1-228ENST00000584074 GRXCR2A6NFK2 248 aa23.84■■□□□ 1.41
PPP4R1-228ENST00000584074 IL9P15248 144 aa23.84■■□□□ 1.41
PPP4R1-228ENST00000584074 NRIP1P48552 1158 aa23.84■■□□□ 1.41
PPP4R1-228ENST00000584074 MCM2P49736 904 aa23.84■■□□□ 1.41
PPP4R1-228ENST00000584074 FXR2P51116 673 aaKnown RBP eCLIP23.84■■□□□ 1.41
PPP4R1-228ENST00000584074 PLCB3Q01970 1234 aa23.84■■□□□ 1.41
PPP4R1-228ENST00000584074 PTGDRQ13258 359 aa23.84■■□□□ 1.41
PPP4R1-228ENST00000584074 UBXN11Q5T124 520 aa23.84■■□□□ 1.41
PPP4R1-228ENST00000584074 GLB1LQ6UWU2 654 aa23.84■■□□□ 1.41
PPP4R1-228ENST00000584074 PPP2R3CQ969Q6 453 aa23.84■■□□□ 1.41
PPP4R1-228ENST00000584074 MRPL9Q9BYD2 267 aaKnown RBP23.84■■□□□ 1.41
PPP4R1-228ENST00000584074 PLXNA4Q9HCM2 1894 aa23.83■■□□□ 1.41
PPP4R1-228ENST00000584074 INO80B-WBP1J3KQ70 363 aa23.83■■□□□ 1.41
PPP4R1-228ENST00000584074 TSPAN1O60635 241 aa23.83■■□□□ 1.41
PPP4R1-228ENST00000584074 TBX10O75333 385 aa23.83■■□□□ 1.41
PPP4R1-228ENST00000584074 ERLIN2O94905 339 aa23.83■■□□□ 1.41
PPP4R1-228ENST00000584074 MBTD1Q05BQ5 628 aa23.83■■□□□ 1.41
PPP4R1-228ENST00000584074 POU5F1BQ06416 359 aa23.83■■□□□ 1.41
PPP4R1-228ENST00000584074 ADAM15Q13444 863 aa23.83■■□□□ 1.41
PPP4R1-228ENST00000584074 CLUL1Q15846 466 aa23.83■■□□□ 1.41
PPP4R1-228ENST00000584074 ECM1Q16610 540 aa23.83■■□□□ 1.41
PPP4R1-228ENST00000584074 MRPL10Q7Z7H8 261 aaKnown RBP23.83■■□□□ 1.41
PPP4R1-228ENST00000584074 IFNLR1Q8IU57 520 aaPredicted RBP23.83■■□□□ 1.41
PPP4R1-228ENST00000584074 MRPS27Q92552 414 aaKnown RBP23.83■■□□□ 1.41
PPP4R1-228ENST00000584074 SPG21Q9NZD8 308 aa23.83■■□□□ 1.41
PPP4R1-228ENST00000584074 LRWD1Q9UFC0 647 aa23.83■■□□□ 1.41
PPP4R1-228ENST00000584074 LZTS1Q9Y250 596 aa23.83■■□□□ 1.41
PPP4R1-228ENST00000584074 INPP5FQ9Y2H2 1132 aa23.83■■□□□ 1.41
PPP4R1-228ENST00000584074 OFD1O75665 1012 aa23.82■■□□□ 1.4
PPP4R1-228ENST00000584074 PPM1AP35813 382 aa23.82■■□□□ 1.4
PPP4R1-228ENST00000584074 CCT6AP40227 531 aaKnown RBP23.82■■□□□ 1.4
PPP4R1-228ENST00000584074 BCAR1P56945 870 aa23.82■■□□□ 1.4
PPP4R1-228ENST00000584074 PUS10Q3MIT2 529 aaKnown RBP23.82■■□□□ 1.4
PPP4R1-228ENST00000584074 NOMO2Q5JPE7 1267 aa23.82■■□□□ 1.4
PPP4R1-228ENST00000584074 AGMOQ6ZNB7 445 aa23.82■■□□□ 1.4
PPP4R1-228ENST00000584074 PGBD4Q96DM1 585 aa23.82■■□□□ 1.4
PPP4R1-228ENST00000584074 TLE6Q9H808 572 aa23.82■■□□□ 1.4
PPP4R1-228ENST00000584074 TBC1D13Q9NVG8 400 aa23.82■■□□□ 1.4
PPP4R1-228ENST00000584074 PUF60Q9UHX1 559 aaKnown RBP23.82■■□□□ 1.4
PPP4R1-228ENST00000584074 NT5C1B-RDH14C9J2C7 533 aa23.81■■□□□ 1.4
PPP4R1-228ENST00000584074 H3BQV1 296 aa23.81■■□□□ 1.4
PPP4R1-228ENST00000584074 FSCN2O14926 492 aa23.81■■□□□ 1.4
PPP4R1-228ENST00000584074 PER2O15055 1255 aa23.81■■□□□ 1.4
PPP4R1-228ENST00000584074 PDIA5Q14554 519 aa23.81■■□□□ 1.4
PPP4R1-228ENST00000584074 PCBP1Q15365 356 aaKnown RBP eCLIP23.81■■□□□ 1.4
PPP4R1-228ENST00000584074 IL17AQ16552 155 aa23.81■■□□□ 1.4
PPP4R1-228ENST00000584074 AMHR2Q16671 573 aa23.81■■□□□ 1.4
PPP4R1-228ENST00000584074 HAUS3Q68CZ6 603 aa23.81■■□□□ 1.4
PPP4R1-228ENST00000584074 PADI6Q6TGC4 694 aa23.81■■□□□ 1.4
PPP4R1-228ENST00000584074 SLC39A11Q8N1S5 342 aa23.81■■□□□ 1.4
PPP4R1-228ENST00000584074 EFHBQ8N7U6 833 aa23.81■■□□□ 1.4
PPP4R1-228ENST00000584074 MCPH1Q8NEM0 835 aa23.81■■□□□ 1.4
PPP4R1-228ENST00000584074 CPB2Q96IY4 423 aa23.81■■□□□ 1.4
PPP4R1-228ENST00000584074 NFKBIZQ9BYH8 718 aa23.81■■□□□ 1.4
PPP4R1-228ENST00000584074 SMC3Q9UQE7 1217 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms