RNA–Protein interactions for RNA: ENST00000580980.1

PSMD3-205, Transcript of proteasome 26S subunit, non-ATPase 3, human

TSL 2

Gene PSMD3, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD3-205	ENST00000580980	ARL2	P36404	184 aa		13.55	□□□□□ -0.24
PSMD3-205	ENST00000580980	PTEN	P60484	403 aa		13.55	□□□□□ -0.24
PSMD3-205	ENST00000580980	PLCB3	Q01970	1234 aa		13.55	□□□□□ -0.24
PSMD3-205	ENST00000580980	CAMK1	Q14012	370 aa		13.55	□□□□□ -0.24
PSMD3-205	ENST00000580980	PDIA5	Q14554	519 aa		13.55	□□□□□ -0.24
PSMD3-205	ENST00000580980	CLLU1OS	Q5K130	101 aa		13.55	□□□□□ -0.24
PSMD3-205	ENST00000580980	HAUS3	Q68CZ6	603 aa		13.55	□□□□□ -0.24
PSMD3-205	ENST00000580980	PDE12	Q6L8Q7	609 aa	Known RBP	13.55	□□□□□ -0.24
PSMD3-205	ENST00000580980	IFNLR1	Q8IU57	520 aa	Predicted RBP	13.55	□□□□□ -0.24
PSMD3-205	ENST00000580980	RNF149	Q8NC42	400 aa		13.55	□□□□□ -0.24
PSMD3-205	ENST00000580980	PIGO	Q8TEQ8	1089 aa		13.55	□□□□□ -0.24
PSMD3-205	ENST00000580980	POF1B	Q8WVV4	589 aa		13.55	□□□□□ -0.24
PSMD3-205	ENST00000580980	NFKBIZ	Q9BYH8	718 aa		13.55	□□□□□ -0.24
PSMD3-205	ENST00000580980	RAB34	Q9BZG1	259 aa		13.55	□□□□□ -0.24
PSMD3-205	ENST00000580980	FAM105A	Q9NUU6	356 aa		13.55	□□□□□ -0.24
PSMD3-205	ENST00000580980	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.55	□□□□□ -0.24
PSMD3-205	ENST00000580980	LZTS1	Q9Y250	596 aa		13.55	□□□□□ -0.24
PSMD3-205	ENST00000580980	MED24	O75448	989 aa		13.54	□□□□□ -0.24
PSMD3-205	ENST00000580980	FGF18	O76093	207 aa		13.54	□□□□□ -0.24
PSMD3-205	ENST00000580980	KCNA5	P22460	613 aa		13.54	□□□□□ -0.24
PSMD3-205	ENST00000580980	DNAJB1	P25685	340 aa		13.54	□□□□□ -0.24
PSMD3-205	ENST00000580980	AXL	P30530	894 aa		13.54	□□□□□ -0.24
PSMD3-205	ENST00000580980	PPM1A	P35813	382 aa		13.54	□□□□□ -0.24
PSMD3-205	ENST00000580980	TOB1	P50616	345 aa	Predicted RBP	13.54	□□□□□ -0.24
PSMD3-205	ENST00000580980	LRRC55	Q6ZSA7	311 aa		13.54	□□□□□ -0.24
PSMD3-205	ENST00000580980	THNSL1	Q8IYQ7	743 aa		13.54	□□□□□ -0.24
PSMD3-205	ENST00000580980	RNF169	Q8NCN4	708 aa		13.54	□□□□□ -0.24
PSMD3-205	ENST00000580980	MCPH1	Q8NEM0	835 aa		13.54	□□□□□ -0.24
PSMD3-205	ENST00000580980	PGBD4	Q96DM1	585 aa		13.54	□□□□□ -0.24
PSMD3-205	ENST00000580980	ZNF558	Q96NG5	402 aa		13.54	□□□□□ -0.24
PSMD3-205	ENST00000580980	MINDY3	Q9H8M7	445 aa		13.54	□□□□□ -0.24
PSMD3-205	ENST00000580980	BMP2K	Q9NSY1	1161 aa	Predicted RBP	13.54	□□□□□ -0.24
PSMD3-205	ENST00000580980	FOXD4L1	Q9NU39	408 aa		13.54	□□□□□ -0.24
PSMD3-205	ENST00000580980	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	13.53	□□□□□ -0.24
PSMD3-205	ENST00000580980	FSD2	A1L4K1	749 aa		13.53	□□□□□ -0.24
PSMD3-205	ENST00000580980		H3BQV1	296 aa		13.53	□□□□□ -0.24
PSMD3-205	ENST00000580980	ERLIN2	O94905	339 aa		13.53	□□□□□ -0.24
PSMD3-205	ENST00000580980	SYT1	P21579	422 aa		13.53	□□□□□ -0.24
PSMD3-205	ENST00000580980	HOXA11	P31270	313 aa	Predicted RBP	13.53	□□□□□ -0.24
PSMD3-205	ENST00000580980	PRPH	P41219	470 aa		13.53	□□□□□ -0.24
PSMD3-205	ENST00000580980	NCBP1	Q09161	790 aa	Known RBP	13.53	□□□□□ -0.24
PSMD3-205	ENST00000580980	HYAL1	Q12794	435 aa		13.53	□□□□□ -0.24
PSMD3-205	ENST00000580980	PTGDR	Q13258	359 aa		13.53	□□□□□ -0.24
PSMD3-205	ENST00000580980	CTC1	Q2NKJ3	1217 aa		13.53	□□□□□ -0.24
PSMD3-205	ENST00000580980	RILPL1	Q5EBL4	403 aa		13.53	□□□□□ -0.24
PSMD3-205	ENST00000580980	LARP1B	Q659C4	914 aa	Known RBP	13.53	□□□□□ -0.24
PSMD3-205	ENST00000580980	KCNT2	Q6UVM3	1135 aa		13.53	□□□□□ -0.24
PSMD3-205	ENST00000580980	GLB1L	Q6UWU2	654 aa		13.53	□□□□□ -0.24
PSMD3-205	ENST00000580980	MRPL10	Q7Z7H8	261 aa	Known RBP	13.53	□□□□□ -0.24
PSMD3-205	ENST00000580980	CNNM3	Q8NE01	707 aa		13.53	□□□□□ -0.24
PSMD3-205	ENST00000580980	HELQ	Q8TDG4	1101 aa		13.53	□□□□□ -0.24
PSMD3-205	ENST00000580980	MRPS27	Q92552	414 aa	Known RBP	13.53	□□□□□ -0.24
PSMD3-205	ENST00000580980	CCDC51	Q96ER9	411 aa		13.53	□□□□□ -0.24
PSMD3-205	ENST00000580980	TLR9	Q9NR96	1032 aa		13.53	□□□□□ -0.24
PSMD3-205	ENST00000580980	LRWD1	Q9UFC0	647 aa		13.53	□□□□□ -0.24
PSMD3-205	ENST00000580980	PUF60	Q9UHX1	559 aa	Known RBP	13.53	□□□□□ -0.24
PSMD3-205	ENST00000580980	PCDHB6	Q9Y5E3	794 aa		13.53	□□□□□ -0.24
PSMD3-205	ENST00000580980	PCDHB2	Q9Y5E7	798 aa		13.53	□□□□□ -0.24
PSMD3-205	ENST00000580980	REV3L	O60673	3130 aa		13.53	□□□□□ -0.24
PSMD3-205	ENST00000580980		A0A087WWV3	80 aa		13.52	□□□□□ -0.25
PSMD3-205	ENST00000580980	STX6	O43752	255 aa		13.52	□□□□□ -0.25
PSMD3-205	ENST00000580980	USO1	O60763	962 aa	Known RBP	13.52	□□□□□ -0.25
PSMD3-205	ENST00000580980	GLRA2	P23416	452 aa		13.52	□□□□□ -0.25
PSMD3-205	ENST00000580980	KRT17	Q04695	432 aa		13.52	□□□□□ -0.25
PSMD3-205	ENST00000580980	CAPS	Q13938	189 aa		13.52	□□□□□ -0.25
PSMD3-205	ENST00000580980	NBR1	Q14596	966 aa		13.52	□□□□□ -0.25
PSMD3-205	ENST00000580980	MCTP1	Q6DN14	999 aa		13.52	□□□□□ -0.25
PSMD3-205	ENST00000580980	IGSF22	Q8N9C0	903 aa		13.52	□□□□□ -0.25
PSMD3-205	ENST00000580980	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	13.52	□□□□□ -0.25
PSMD3-205	ENST00000580980	ASAP3	Q8TDY4	903 aa		13.52	□□□□□ -0.25
PSMD3-205	ENST00000580980	POLR3F	Q9H1D9	316 aa	Predicted RBP	13.52	□□□□□ -0.25
PSMD3-205	ENST00000580980	UBN1	Q9NPG3	1134 aa		13.52	□□□□□ -0.25
PSMD3-205	ENST00000580980	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	13.52	□□□□□ -0.25
PSMD3-205	ENST00000580980	CLDND1	Q9NY35	253 aa		13.52	□□□□□ -0.25
PSMD3-205	ENST00000580980	SPG21	Q9NZD8	308 aa		13.52	□□□□□ -0.25
PSMD3-205	ENST00000580980	HCST	Q9UBK5	93 aa		13.52	□□□□□ -0.25
PSMD3-205	ENST00000580980	FAM50B	Q9Y247	325 aa		13.52	□□□□□ -0.25
PSMD3-205	ENST00000580980	CNTNAP2	Q9UHC6	1331 aa		13.52	□□□□□ -0.25
PSMD3-205	ENST00000580980	VCAN	P13611	3396 aa		13.51	□□□□□ -0.25
PSMD3-205	ENST00000580980	KIAA1671	Q9BY89	1806 aa		13.51	□□□□□ -0.25
PSMD3-205	ENST00000580980	ARHGEF35	A5YM69	484 aa		13.51	□□□□□ -0.25
PSMD3-205	ENST00000580980	GRXCR2	A6NFK2	248 aa		13.51	□□□□□ -0.25
PSMD3-205	ENST00000580980	INO80B-WBP1	J3KQ70	363 aa		13.51	□□□□□ -0.25
PSMD3-205	ENST00000580980	FSCN2	O14926	492 aa		13.51	□□□□□ -0.25
PSMD3-205	ENST00000580980	TSPAN1	O60635	241 aa		13.51	□□□□□ -0.25
PSMD3-205	ENST00000580980	OFD1	O75665	1012 aa		13.51	□□□□□ -0.25
PSMD3-205	ENST00000580980	CYP11B2	P19099	503 aa		13.51	□□□□□ -0.25
PSMD3-205	ENST00000580980	NCL	P19338	710 aa	Known RBP	13.51	□□□□□ -0.25
PSMD3-205	ENST00000580980	IRS1	P35568	1242 aa		13.51	□□□□□ -0.25
PSMD3-205	ENST00000580980	LTBR	P36941	435 aa		13.51	□□□□□ -0.25
PSMD3-205	ENST00000580980	CCT6A	P40227	531 aa	Known RBP	13.51	□□□□□ -0.25
PSMD3-205	ENST00000580980	ALDH7A1	P49419	539 aa	Known RBP	13.51	□□□□□ -0.25
PSMD3-205	ENST00000580980	MBTD1	Q05BQ5	628 aa		13.51	□□□□□ -0.25
PSMD3-205	ENST00000580980	ADAM15	Q13444	863 aa		13.51	□□□□□ -0.25
PSMD3-205	ENST00000580980	NOMO2	Q5JPE7	1267 aa		13.51	□□□□□ -0.25
PSMD3-205	ENST00000580980	UBXN11	Q5T124	520 aa		13.51	□□□□□ -0.25
PSMD3-205	ENST00000580980	PTCRA	Q6ISU1	281 aa	Predicted RBP	13.51	□□□□□ -0.25
PSMD3-205	ENST00000580980	NOTUM	Q6P988	496 aa		13.51	□□□□□ -0.25
PSMD3-205	ENST00000580980	POTEG	Q6S5H5	508 aa		13.51	□□□□□ -0.25
PSMD3-205	ENST00000580980	PADI6	Q6TGC4	694 aa		13.51	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms