RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 TCP11Q8WWU5 503 aa10.12□□□□□ -0.79
NDE1-207ENST00000573203 PSPC1Q8WXF1 523 aaKnown RBP10.12□□□□□ -0.79
NDE1-207ENST00000573203 CLP1Q92989 425 aaKnown RBP10.12□□□□□ -0.79
NDE1-207ENST00000573203 TMEM143Q96AN5 459 aa10.12□□□□□ -0.79
NDE1-207ENST00000573203 MRPL38Q96DV4 380 aaKnown RBP10.12□□□□□ -0.79
NDE1-207ENST00000573203 MTRQ99707 1265 aa10.12□□□□□ -0.79
NDE1-207ENST00000573203 HSD17B14Q9BPX1 270 aa10.12□□□□□ -0.79
NDE1-207ENST00000573203 C11orf84Q9BUA3 381 aaPredicted RBP10.12□□□□□ -0.79
NDE1-207ENST00000573203 DHX33Q9H6R0 707 aaKnown RBP10.12□□□□□ -0.79
NDE1-207ENST00000573203 ATP6V0A4Q9HBG4 840 aa10.12□□□□□ -0.79
NDE1-207ENST00000573203 ANKEF1Q9NU02 776 aa10.12□□□□□ -0.79
NDE1-207ENST00000573203 TMEM161AQ9NX61 479 aa10.12□□□□□ -0.79
NDE1-207ENST00000573203 COL4A3BPQ9Y5P4 624 aa10.12□□□□□ -0.79
NDE1-207ENST00000573203 MRPL42Q9Y6G3 142 aaKnown RBP10.12□□□□□ -0.79
NDE1-207ENST00000573203 TBKBP1A7MCY6 615 aa10.11□□□□□ -0.79
NDE1-207ENST00000573203 C5orf67F2Z3F1 127 aa10.11□□□□□ -0.79
NDE1-207ENST00000573203 H3BQV1 296 aa10.11□□□□□ -0.79
NDE1-207ENST00000573203 LYPLA2O95372 231 aa10.11□□□□□ -0.79
NDE1-207ENST00000573203 BRD1O95696 1058 aa10.11□□□□□ -0.79
NDE1-207ENST00000573203 LINC00271P0C7V0 271 aa10.11□□□□□ -0.79
NDE1-207ENST00000573203 FGFR1P11362 822 aa10.11□□□□□ -0.79
NDE1-207ENST00000573203 SFPQP23246 707 aaKnown RBP eCLIP10.11□□□□□ -0.79
NDE1-207ENST00000573203 FAM189BP81408 668 aa10.11□□□□□ -0.79
NDE1-207ENST00000573203 MRPS5P82675 430 aaKnown RBP10.11□□□□□ -0.79
NDE1-207ENST00000573203 EMC2Q15006 297 aa10.11□□□□□ -0.79
NDE1-207ENST00000573203 TJAP1Q5JTD0 557 aa10.11□□□□□ -0.79
NDE1-207ENST00000573203 FAM102BQ5T8I3 360 aa10.11□□□□□ -0.79
NDE1-207ENST00000573203 CATSPER4Q7RTX7 472 aa10.11□□□□□ -0.79
NDE1-207ENST00000573203 KSR1Q8IVT5 923 aa10.11□□□□□ -0.79
NDE1-207ENST00000573203 ZNF454Q8N9F8 522 aa10.11□□□□□ -0.79
NDE1-207ENST00000573203 ERMNQ8TAM6 284 aa10.11□□□□□ -0.79
NDE1-207ENST00000573203 PRPF31Q8WWY3 499 aaKnown RBP10.11□□□□□ -0.79
NDE1-207ENST00000573203 SYMPKQ92797 1274 aaKnown RBP10.11□□□□□ -0.79
NDE1-207ENST00000573203 ELAC1Q9H777 363 aaKnown RBP10.11□□□□□ -0.79
NDE1-207ENST00000573203 TUFT1Q9NNX1 390 aa10.11□□□□□ -0.79
NDE1-207ENST00000573203 DACT1Q9NYF0 836 aa10.11□□□□□ -0.79
NDE1-207ENST00000573203 SMC3Q9UQE7 1217 aa10.11□□□□□ -0.79
NDE1-207ENST00000573203 GOLGA6L22H0YM25 854 aa10.1□□□□□ -0.79
NDE1-207ENST00000573203 DPYSL4O14531 572 aa10.1□□□□□ -0.79
NDE1-207ENST00000573203 ASAP2O43150 1006 aa10.1□□□□□ -0.79
NDE1-207ENST00000573203 HOXA2O43364 376 aa10.1□□□□□ -0.79
NDE1-207ENST00000573203 SRGAP2CP0DJJ0 459 aa10.1□□□□□ -0.79
NDE1-207ENST00000573203 LAMTOR4Q0VGL1 99 aa10.1□□□□□ -0.79
NDE1-207ENST00000573203 AAK1Q2M2I8 961 aa10.1□□□□□ -0.79
NDE1-207ENST00000573203 TIGD5Q53EQ6 642 aa10.1□□□□□ -0.79
NDE1-207ENST00000573203 FERMT3Q86UX7 667 aa10.1□□□□□ -0.79
NDE1-207ENST00000573203 ECHDC2Q86YB7 292 aa10.1□□□□□ -0.79
NDE1-207ENST00000573203 ABI1Q8IZP0 508 aa10.1□□□□□ -0.79
NDE1-207ENST00000573203 RNF169Q8NCN4 708 aa10.1□□□□□ -0.79
NDE1-207ENST00000573203 PIGOQ8TEQ8 1089 aa10.1□□□□□ -0.79
NDE1-207ENST00000573203 HLA-CQ95604 372 aa10.1□□□□□ -0.79
NDE1-207ENST00000573203 ASB2Q96Q27 587 aa10.1□□□□□ -0.79
NDE1-207ENST00000573203 PLVAPQ9BX97 442 aa10.1□□□□□ -0.79
NDE1-207ENST00000573203 COL25A1Q9BXS0 654 aaPredicted RBP10.1□□□□□ -0.79
NDE1-207ENST00000573203 LMAN2LQ9H0V9 348 aa10.1□□□□□ -0.79
NDE1-207ENST00000573203 CHST12Q9NRB3 414 aa10.1□□□□□ -0.79
NDE1-207ENST00000573203 COG5Q9UP83 839 aa10.1□□□□□ -0.79
NDE1-207ENST00000573203 PIN4Q9Y237 131 aaKnown RBP10.1□□□□□ -0.79
NDE1-207ENST00000573203 ZDHHC9Q9Y397 364 aa10.1□□□□□ -0.79
NDE1-207ENST00000573203 ATG2AQ2TAZ0 1938 aa10.09□□□□□ -0.79
NDE1-207ENST00000573203 A0A087WWV3 80 aa10.09□□□□□ -0.79
NDE1-207ENST00000573203 A0A0U1RQF3 1178 aa10.09□□□□□ -0.79
NDE1-207ENST00000573203 TK2O00142 265 aa10.09□□□□□ -0.79
NDE1-207ENST00000573203 GRM6O15303 877 aa10.09□□□□□ -0.79
NDE1-207ENST00000573203 USO1O60763 962 aaKnown RBP10.09□□□□□ -0.79
NDE1-207ENST00000573203 MED24O75448 989 aa10.09□□□□□ -0.79
NDE1-207ENST00000573203 DGAT1O75907 488 aa10.09□□□□□ -0.79
NDE1-207ENST00000573203 CSPG5O95196 566 aa10.09□□□□□ -0.79
NDE1-207ENST00000573203 SPATA31C1P0DKV0 1188 aa10.09□□□□□ -0.79
NDE1-207ENST00000573203 XRCC6P12956 609 aaKnown RBP eCLIP10.09□□□□□ -0.798e-7■■□□□ 11.8
NDE1-207ENST00000573203 RARRES1P49788 294 aa10.09□□□□□ -0.79
NDE1-207ENST00000573203 TOB1P50616 345 aaPredicted RBP10.09□□□□□ -0.79
NDE1-207ENST00000573203 TFF2Q03403 129 aa10.09□□□□□ -0.79
NDE1-207ENST00000573203 PTGDRQ13258 359 aa10.09□□□□□ -0.79
NDE1-207ENST00000573203 MXD4Q14582 209 aaPredicted RBP10.09□□□□□ -0.79
NDE1-207ENST00000573203 NAALADL2Q58DX5 795 aa10.09□□□□□ -0.79
NDE1-207ENST00000573203 HAUS3Q68CZ6 603 aa10.09□□□□□ -0.79
NDE1-207ENST00000573203 TWF2Q6IBS0 349 aaKnown RBP10.09□□□□□ -0.79
NDE1-207ENST00000573203 SRGAP1Q7Z6B7 1085 aa10.09□□□□□ -0.79
NDE1-207ENST00000573203 CATSPER3Q86XQ3 398 aa10.09□□□□□ -0.79
NDE1-207ENST00000573203 C4orf32Q8N8J7 132 aa10.09□□□□□ -0.79
NDE1-207ENST00000573203 RNF149Q8NC42 400 aa10.09□□□□□ -0.79
NDE1-207ENST00000573203 P2RX5Q93086 422 aa10.09□□□□□ -0.79
NDE1-207ENST00000573203 NACC1Q96RE7 527 aa10.09□□□□□ -0.79
NDE1-207ENST00000573203 POLR3CQ9BUI4 534 aaPredicted RBP10.09□□□□□ -0.79
NDE1-207ENST00000573203 RAB34Q9BZG1 259 aa10.09□□□□□ -0.79
NDE1-207ENST00000573203 TMEM117Q9H0C3 514 aa10.09□□□□□ -0.79
NDE1-207ENST00000573203 NSUN3Q9H649 340 aaKnown RBP10.09□□□□□ -0.79
NDE1-207ENST00000573203 IFT122Q9HBG6 1241 aa10.09□□□□□ -0.79
NDE1-207ENST00000573203 ALG13Q9NP73 1137 aaKnown RBP10.09□□□□□ -0.79
NDE1-207ENST00000573203 XPNPEP1Q9NQW7 623 aa10.09□□□□□ -0.79
NDE1-207ENST00000573203 AAASQ9NRG9 546 aa10.09□□□□□ -0.79
NDE1-207ENST00000573203 PCDHB6Q9Y5E3 794 aa10.09□□□□□ -0.79
NDE1-207ENST00000573203 PCDHB12Q9Y5F1 795 aa10.09□□□□□ -0.79
NDE1-207ENST00000573203 PLXNA4Q9HCM2 1894 aa10.08□□□□□ -0.8
NDE1-207ENST00000573203 TCF20Q9UGU0 1960 aaKnown RBP10.08□□□□□ -0.8
NDE1-207ENST00000573203 ARHGEF35A5YM69 484 aa10.08□□□□□ -0.8
NDE1-207ENST00000573203 LAD1O00515 517 aa10.08□□□□□ -0.8
NDE1-207ENST00000573203 EOMESO95936 686 aa10.08□□□□□ -0.8
NDE1-207ENST00000573203 SKIP12755 728 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms