RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 FSTL1Q12841 308 aa19.74■□□□□ 0.75
SMPD3-211ENST00000568373 C9orf131Q5VYM1 1079 aa19.74■□□□□ 0.75
SMPD3-211ENST00000568373 VPS36Q86VN1 386 aa19.74■□□□□ 0.75
SMPD3-211ENST00000568373 ERO1BQ86YB8 467 aa19.74■□□□□ 0.75
SMPD3-211ENST00000568373 BSNDQ8WZ55 320 aa19.74■□□□□ 0.75
SMPD3-211ENST00000568373 PNKPQ96T60 521 aa19.74■□□□□ 0.75
SMPD3-211ENST00000568373 SPATC1LQ9H0A9 340 aa19.74■□□□□ 0.75
SMPD3-211ENST00000568373 ARFGAP3Q9NP61 516 aa19.74■□□□□ 0.75
SMPD3-211ENST00000568373 CYP26B1Q9NR63 512 aa19.74■□□□□ 0.75
SMPD3-211ENST00000568373 NAGPAQ9UK23 515 aa19.74■□□□□ 0.75
SMPD3-211ENST00000568373 EMSYQ7Z589 1322 aa19.73■□□□□ 0.75
SMPD3-211ENST00000568373 DENND3A2RUS2 1198 aa19.73■□□□□ 0.75
SMPD3-211ENST00000568373 BTNL10A8MVZ5 291 aa19.73■□□□□ 0.75
SMPD3-211ENST00000568373 P4HA2O15460 535 aa19.73■□□□□ 0.75
SMPD3-211ENST00000568373 SORBS3O60504 671 aa19.73■□□□□ 0.75
SMPD3-211ENST00000568373 N4BP1O75113 896 aaKnown RBP19.73■□□□□ 0.75
SMPD3-211ENST00000568373 GFPT2O94808 682 aa19.73■□□□□ 0.75
SMPD3-211ENST00000568373 SEC31AO94979 1220 aaKnown RBP19.73■□□□□ 0.75
SMPD3-211ENST00000568373 RHOXF2BP0C7M4 288 aa19.73■□□□□ 0.75
SMPD3-211ENST00000568373 PNMA6AP0CW24 399 aaPredicted RBP19.73■□□□□ 0.75
SMPD3-211ENST00000568373 TCP1P17987 556 aaKnown RBP19.73■□□□□ 0.75
SMPD3-211ENST00000568373 RFX1P22670 979 aa19.73■□□□□ 0.75
SMPD3-211ENST00000568373 LMO3Q8TAP4 145 aa19.73■□□□□ 0.75
SMPD3-211ENST00000568373 CAGE1Q8TC20 777 aa19.73■□□□□ 0.75
SMPD3-211ENST00000568373 RHOXF2Q9BQY4 288 aa19.73■□□□□ 0.75
SMPD3-211ENST00000568373 NENFQ9UMX5 172 aa19.73■□□□□ 0.75
SMPD3-211ENST00000568373 HYOU1Q9Y4L1 999 aa19.73■□□□□ 0.75
SMPD3-211ENST00000568373 EVI5O60447 810 aa19.72■□□□□ 0.75
SMPD3-211ENST00000568373 SOX10P56693 466 aa19.72■□□□□ 0.75
SMPD3-211ENST00000568373 RTP1P59025 263 aa19.72■□□□□ 0.75
SMPD3-211ENST00000568373 IRX3P78415 501 aaPredicted RBP19.72■□□□□ 0.75
SMPD3-211ENST00000568373 PPP3CAQ08209 521 aa19.72■□□□□ 0.75
SMPD3-211ENST00000568373 DRAP1Q14919 205 aaPredicted RBP19.72■□□□□ 0.75
SMPD3-211ENST00000568373 XKR3Q5GH77 459 aa19.72■□□□□ 0.75
SMPD3-211ENST00000568373 ALKBH5Q6P6C2 394 aaKnown RBP19.72■□□□□ 0.75
SMPD3-211ENST00000568373 CYFIP1Q7L576 1253 aa19.72■□□□□ 0.75
SMPD3-211ENST00000568373 CREG2Q8IUH2 290 aa19.72■□□□□ 0.75
SMPD3-211ENST00000568373 FMNL3Q8IVF7 1028 aa19.72■□□□□ 0.75
SMPD3-211ENST00000568373 ANKRD13AQ8IZ07 590 aa19.72■□□□□ 0.75
SMPD3-211ENST00000568373 ZSWIM2Q8NEG5 633 aa19.72■□□□□ 0.75
SMPD3-211ENST00000568373 CLMNQ96JQ2 1002 aa19.72■□□□□ 0.75
SMPD3-211ENST00000568373 OSBPL9Q96SU4 736 aa19.72■□□□□ 0.75
SMPD3-211ENST00000568373 XPNPEP1Q9NQW7 623 aa19.72■□□□□ 0.75
SMPD3-211ENST00000568373 ATP8B3O60423 1300 aa19.72■□□□□ 0.75
SMPD3-211ENST00000568373 PDE2AO00408 941 aaPredicted RBP19.72■□□□□ 0.75
SMPD3-211ENST00000568373 CXCL11O14625 94 aa19.72■□□□□ 0.75
SMPD3-211ENST00000568373 ATP8B1O43520 1251 aa19.72■□□□□ 0.75
SMPD3-211ENST00000568373 TUBBP07437 444 aa19.72■□□□□ 0.75
SMPD3-211ENST00000568373 ADSSP30520 456 aa19.72■□□□□ 0.75
SMPD3-211ENST00000568373 CETN1Q12798 172 aa19.72■□□□□ 0.75
SMPD3-211ENST00000568373 C1orf220Q5T0J3 134 aa19.72■□□□□ 0.75
SMPD3-211ENST00000568373 TLR10Q9BXR5 811 aa19.72■□□□□ 0.75
SMPD3-211ENST00000568373 GPR88Q9GZN0 384 aa19.72■□□□□ 0.75
SMPD3-211ENST00000568373 ATP6V0A4Q9HBG4 840 aa19.72■□□□□ 0.75
SMPD3-211ENST00000568373 TSKSQ9UJT2 592 aa19.72■□□□□ 0.75
SMPD3-211ENST00000568373 PCDHGC5Q9Y5F6 944 aa19.72■□□□□ 0.75
SMPD3-211ENST00000568373 SYNGAP1Q96PV0 1343 aa19.71■□□□□ 0.75
SMPD3-211ENST00000568373 SPDYE5A6NIY4 337 aa19.71■□□□□ 0.75
SMPD3-211ENST00000568373 ANKRD63C9JTQ0 380 aa19.71■□□□□ 0.75
SMPD3-211ENST00000568373 ATG7O95352 703 aa19.71■□□□□ 0.75
SMPD3-211ENST00000568373 EDNRBP24530 442 aa19.71■□□□□ 0.75
SMPD3-211ENST00000568373 CNGA1P29973 690 aa19.71■□□□□ 0.75
SMPD3-211ENST00000568373 NF2P35240 595 aa19.71■□□□□ 0.75
SMPD3-211ENST00000568373 MCCD1P59942 119 aaPredicted RBP19.71■□□□□ 0.75
SMPD3-211ENST00000568373 NFRKBQ6P4R8 1299 aa19.71■□□□□ 0.75
SMPD3-211ENST00000568373 SEPT14Q6ZU15 432 aa19.71■□□□□ 0.75
SMPD3-211ENST00000568373 NCAPG2Q86XI2 1143 aa19.71■□□□□ 0.75
SMPD3-211ENST00000568373 KRT222Q8N1A0 295 aa19.71■□□□□ 0.75
SMPD3-211ENST00000568373 CDCA5Q96FF9 252 aa19.71■□□□□ 0.75
SMPD3-211ENST00000568373 MAFBQ9Y5Q3 323 aaPredicted RBP19.71■□□□□ 0.75
SMPD3-211ENST00000568373 PALMO75781 387 aa19.71■□□□□ 0.75
SMPD3-211ENST00000568373 PHLDB3Q6NSJ2 640 aa19.71■□□□□ 0.75
SMPD3-211ENST00000568373 PLEKHO2Q8TD55 490 aa19.71■□□□□ 0.75
SMPD3-211ENST00000568373 ZNF526Q8TF50 670 aaPredicted RBP19.71■□□□□ 0.75
SMPD3-211ENST00000568373 COG1Q8WTW3 980 aa19.71■□□□□ 0.75
SMPD3-211ENST00000568373 HNRNPLLQ8WVV9 542 aaKnown RBP19.71■□□□□ 0.75
SMPD3-211ENST00000568373 ASCC2Q9H1I8 757 aaPredicted RBP19.71■□□□□ 0.75
SMPD3-211ENST00000568373 ADGRA3Q8IWK6 1321 aa19.7■□□□□ 0.74
SMPD3-211ENST00000568373 DDX3XO00571 662 aaKnown RBP eCLIP19.7■□□□□ 0.74
SMPD3-211ENST00000568373 PMM2O15305 246 aa19.7■□□□□ 0.74
SMPD3-211ENST00000568373 NCK2O43639 380 aa19.7■□□□□ 0.74
SMPD3-211ENST00000568373 ADRB2P07550 413 aa19.7■□□□□ 0.74
SMPD3-211ENST00000568373 GCLMP48507 274 aa19.7■□□□□ 0.74
SMPD3-211ENST00000568373 SNRNP35Q16560 246 aaKnown RBP19.7■□□□□ 0.74
SMPD3-211ENST00000568373 EPC2Q52LR7 807 aa19.7■□□□□ 0.74
SMPD3-211ENST00000568373 ZNF572Q7Z3I7 529 aaPredicted RBP19.7■□□□□ 0.74
SMPD3-211ENST00000568373 ZNF302Q9NR11 478 aa19.7■□□□□ 0.74
SMPD3-211ENST00000568373 GOLGA8IPA6NC78 632 aa19.69■□□□□ 0.74
SMPD3-211ENST00000568373 SOWAHBA6NEL2 793 aa19.69■□□□□ 0.74
SMPD3-211ENST00000568373 GOLGA8JA6NMD2 632 aa19.69■□□□□ 0.74
SMPD3-211ENST00000568373 TBC1D8O95759 1140 aa19.69■□□□□ 0.74
SMPD3-211ENST00000568373 CCDC172P0C7W6 258 aa19.69■□□□□ 0.74
SMPD3-211ENST00000568373 MTERF2Q49AM1 385 aa19.69■□□□□ 0.74
SMPD3-211ENST00000568373 USP50Q70EL3 339 aaPredicted RBP19.69■□□□□ 0.74
SMPD3-211ENST00000568373 MOB2Q70IA6 237 aa19.69■□□□□ 0.74
SMPD3-211ENST00000568373 CBWD2Q8IUF1 395 aa19.69■□□□□ 0.74
SMPD3-211ENST00000568373 IFT74Q96LB3 600 aa19.69■□□□□ 0.74
SMPD3-211ENST00000568373 PAGR1Q9BTK6 254 aa19.69■□□□□ 0.74
SMPD3-211ENST00000568373 KCNH4Q9UQ05 1017 aa19.69■□□□□ 0.74
SMPD3-211ENST00000568373 ATP4AP20648 1035 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms